RNA–Protein interactions for RNA: ENST00000553474.5

SHMT2-205, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-205ENST00000553474 EPHA8P29322 1005 aaPredicted RBP11.54□□□□□ -0.56
SHMT2-205ENST00000553474 OR3A3P47888 321 aa11.54□□□□□ -0.56
SHMT2-205ENST00000553474 ZNF81P51508 661 aa11.54□□□□□ -0.56
SHMT2-205ENST00000553474 EMP2P54851 167 aa11.54□□□□□ -0.56
SHMT2-205ENST00000553474 PSMA6P60900 246 aaKnown RBP11.54□□□□□ -0.56
SHMT2-205ENST00000553474 POU3F1Q03052 451 aaPredicted RBP11.54□□□□□ -0.56
SHMT2-205ENST00000553474 MFGE8Q08431 387 aaPredicted RBP11.54□□□□□ -0.56
SHMT2-205ENST00000553474 SHBQ15464 509 aa11.54□□□□□ -0.56
SHMT2-205ENST00000553474 ASPHD2Q6ICH7 369 aa11.54□□□□□ -0.56
SHMT2-205ENST00000553474 Q6ZTK2 550 aa11.54□□□□□ -0.56
SHMT2-205ENST00000553474 DCXRQ7Z4W1 244 aa11.54□□□□□ -0.56
SHMT2-205ENST00000553474 CPEB2Q7Z5Q1 589 aaKnown RBP11.54□□□□□ -0.56
SHMT2-205ENST00000553474 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.54□□□□□ -0.56
SHMT2-205ENST00000553474 TMEM229BQ8NBD8 167 aa11.54□□□□□ -0.56
SHMT2-205ENST00000553474 CLEC1AQ8NC01 280 aa11.54□□□□□ -0.56
SHMT2-205ENST00000553474 OR13C3Q8NGS6 347 aa11.54□□□□□ -0.56
SHMT2-205ENST00000553474 SLC22A8Q8TCC7 542 aa11.54□□□□□ -0.56
SHMT2-205ENST00000553474 SLC25A43Q8WUT9 341 aaPredicted RBP11.54□□□□□ -0.56
SHMT2-205ENST00000553474 CCDC107Q8WV48 283 aa11.54□□□□□ -0.56
SHMT2-205ENST00000553474 MS4A3Q96HJ5 214 aa11.54□□□□□ -0.56
SHMT2-205ENST00000553474 ARL5BQ96KC2 179 aa11.54□□□□□ -0.56
SHMT2-205ENST00000553474 OR6C1Q96RD1 312 aa11.54□□□□□ -0.56
SHMT2-205ENST00000553474 SLC25A21Q9BQT8 299 aaPredicted RBP11.54□□□□□ -0.56
SHMT2-205ENST00000553474 MYOZ1Q9NP98 299 aaPredicted RBP11.54□□□□□ -0.56
SHMT2-205ENST00000553474 ZNF69Q9UC07 566 aa11.54□□□□□ -0.56
SHMT2-205ENST00000553474 ASCC3Q8N3C0 2202 aaKnown RBP11.54□□□□□ -0.56
SHMT2-205ENST00000553474 TRAV18A0A075B6X5 111 aa11.54□□□□□ -0.56
SHMT2-205ENST00000553474 TRBV11-1A0A0K0K1C0 115 aa11.54□□□□□ -0.56
SHMT2-205ENST00000553474 TMEM269A0A1B0GVZ9 245 aa11.54□□□□□ -0.56
SHMT2-205ENST00000553474 LNP1A1A4G5 178 aa11.54□□□□□ -0.56
SHMT2-205ENST00000553474 G3V3Q6 166 aa11.54□□□□□ -0.56
SHMT2-205ENST00000553474 LDLRAD4O15165 306 aa11.54□□□□□ -0.56
SHMT2-205ENST00000553474 YKT6O15498 198 aa11.54□□□□□ -0.56
SHMT2-205ENST00000553474 WISP1O95388 367 aa11.54□□□□□ -0.56
SHMT2-205ENST00000553474 H2BFMP0C1H6 154 aa11.54□□□□□ -0.56
SHMT2-205ENST00000553474 HLA-DOBP13765 273 aa11.54□□□□□ -0.56
SHMT2-205ENST00000553474 GTF2F2P13984 249 aa11.54□□□□□ -0.56
SHMT2-205ENST00000553474 ADH6P28332 368 aa11.54□□□□□ -0.56
SHMT2-205ENST00000553474 RAD52P43351 418 aa11.54□□□□□ -0.56
SHMT2-205ENST00000553474 SELENOPP49908 381 aa11.54□□□□□ -0.56
SHMT2-205ENST00000553474 ZNF239Q16600 458 aaKnown RBP11.54□□□□□ -0.56
SHMT2-205ENST00000553474 CLLU1Q5K131 121 aa11.54□□□□□ -0.56
SHMT2-205ENST00000553474 PLA2G2CQ5R387 149 aa11.54□□□□□ -0.56
SHMT2-205ENST00000553474 GLYATL3Q5SZD4 288 aa11.54□□□□□ -0.56
SHMT2-205ENST00000553474 ZNF385CQ66K41 422 aaPredicted RBP11.54□□□□□ -0.56
SHMT2-205ENST00000553474 C3orf33Q6P1S2 294 aa11.54□□□□□ -0.56
SHMT2-205ENST00000553474 TMEM205Q6UW68 189 aa11.54□□□□□ -0.56
SHMT2-205ENST00000553474 ZNF574Q6ZN55 896 aaPredicted RBP11.54□□□□□ -0.56
SHMT2-205ENST00000553474 SLC36A1Q7Z2H8 476 aa11.54□□□□□ -0.56
SHMT2-205ENST00000553474 OR10H5Q8NGA6 315 aa11.54□□□□□ -0.56
SHMT2-205ENST00000553474 C5orf34Q96MH7 638 aa11.54□□□□□ -0.56
SHMT2-205ENST00000553474 WDR77Q9BQA1 342 aaPredicted RBP11.54□□□□□ -0.56
SHMT2-205ENST00000553474 NUDT16L1Q9BRJ7 211 aaKnown RBP11.54□□□□□ -0.56
SHMT2-205ENST00000553474 GINS4Q9BRT9 223 aa11.54□□□□□ -0.56
SHMT2-205ENST00000553474 ATG5Q9H1Y0 275 aa11.54□□□□□ -0.56
SHMT2-205ENST00000553474 KLRF1Q9NZS2 232 aa11.54□□□□□ -0.56
SHMT2-205ENST00000553474 MYOTQ9UBF9 498 aa11.54□□□□□ -0.56
SHMT2-205ENST00000553474 UBQLN2Q9UHD9 624 aa11.54□□□□□ -0.56
SHMT2-205ENST00000553474 EMC9Q9Y3B6 208 aa11.54□□□□□ -0.56
SHMT2-205ENST00000553474 MAB21L2Q9Y586 359 aa11.54□□□□□ -0.56
SHMT2-205ENST00000553474 WIF1Q9Y5W5 379 aa11.54□□□□□ -0.56
SHMT2-205ENST00000553474 B3GALT1Q9Y5Z6 326 aa11.54□□□□□ -0.56
SHMT2-205ENST00000553474 ZFHX2Q9C0A1 2572 aaPredicted RBP11.53□□□□□ -0.56
SHMT2-205ENST00000553474 IGHV3-20A0A0C4DH32 117 aa11.53□□□□□ -0.56
SHMT2-205ENST00000553474 LOC107986453A0A1B0GWG9 222 aa11.53□□□□□ -0.56
SHMT2-205ENST00000553474 OR2M5A3KFT3 312 aa11.53□□□□□ -0.56
SHMT2-205ENST00000553474 METTL21EPA6NDL7 271 aa11.53□□□□□ -0.56
SHMT2-205ENST00000553474 TMEM200CA6NKL6 621 aa11.53□□□□□ -0.56
SHMT2-205ENST00000553474 HMSDA8MTL9 139 aa11.53□□□□□ -0.56
SHMT2-205ENST00000553474 M0R233 179 aa11.53□□□□□ -0.56
SHMT2-205ENST00000553474 DOK2O60496 412 aa11.53□□□□□ -0.56
SHMT2-205ENST00000553474 TSC22D2O75157 780 aa11.53□□□□□ -0.56
SHMT2-205ENST00000553474 FBXO45P0C2W1 286 aa11.53□□□□□ -0.56
SHMT2-205ENST00000553474 NR2C1P13056 603 aa11.53□□□□□ -0.56
SHMT2-205ENST00000553474 EIF1P41567 113 aaKnown RBP11.53□□□□□ -0.56
SHMT2-205ENST00000553474 GSK3AP49840 483 aa11.53□□□□□ -0.56
SHMT2-205ENST00000553474 EFNB2P52799 333 aa11.53□□□□□ -0.56
SHMT2-205ENST00000553474 FOXF1Q12946 379 aa11.53□□□□□ -0.56
SHMT2-205ENST00000553474 ZMYND11Q15326 602 aa11.53□□□□□ -0.56
SHMT2-205ENST00000553474 PLPPR5Q32ZL2 321 aa11.53□□□□□ -0.56
SHMT2-205ENST00000553474 STEAP1BQ6NZ63 245 aa11.53□□□□□ -0.56
SHMT2-205ENST00000553474 LRFN4Q6PJG9 635 aa11.53□□□□□ -0.56
SHMT2-205ENST00000553474 KLHL24Q6TFL4 600 aa11.53□□□□□ -0.56
SHMT2-205ENST00000553474 SHISA6Q6ZSJ9 500 aa11.53□□□□□ -0.56
SHMT2-205ENST00000553474 FTMTQ8N4E7 242 aa11.53□□□□□ -0.56
SHMT2-205ENST00000553474 PLPP7Q8NBV4 271 aa11.53□□□□□ -0.56
SHMT2-205ENST00000553474 NAT6Q93015 286 aa11.53□□□□□ -0.56
SHMT2-205ENST00000553474 SEC22CQ9BRL7 303 aa11.53□□□□□ -0.56
SHMT2-205ENST00000553474 UQCC2Q9BRT2 126 aa11.53□□□□□ -0.56
SHMT2-205ENST00000553474 C1orf198Q9H425 327 aa11.53□□□□□ -0.56
SHMT2-205ENST00000553474 BEX1Q9HBH7 125 aa11.53□□□□□ -0.56
SHMT2-205ENST00000553474 TAS2R4Q9NYW5 299 aa11.53□□□□□ -0.56
SHMT2-205ENST00000553474 CYB5R1Q9UHQ9 305 aa11.53□□□□□ -0.56
SHMT2-205ENST00000553474 NXT1Q9UKK6 140 aaKnown RBP11.53□□□□□ -0.56
SHMT2-205ENST00000553474 LOC102725191A0A1B0GVB3 256 aa11.52□□□□□ -0.57
SHMT2-205ENST00000553474 PLSCR5A0PG75 271 aa11.52□□□□□ -0.57
SHMT2-205ENST00000553474 PYCARD-AS1I3L0S3 204 aa11.52□□□□□ -0.57
SHMT2-205ENST00000553474 ERCC1P07992 297 aaPredicted RBP11.52□□□□□ -0.57
SHMT2-205ENST00000553474 ANXA7P20073 488 aaKnown RBP11.52□□□□□ -0.57
SHMT2-205ENST00000553474 HSD11B1P28845 292 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms