RNA–Protein interactions for RNA: ENST00000553309.5

ATXN3-218, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,022 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-218ENST00000553309 ACTG2P63267 376 aa4.15□□□□□ -1.75
ATXN3-218ENST00000553309 ACTC1P68032 377 aa4.15□□□□□ -1.75
ATXN3-218ENST00000553309 ACTA1P68133 377 aa4.15□□□□□ -1.75
ATXN3-218ENST00000553309 RGS1Q08116 209 aa4.15□□□□□ -1.75
ATXN3-218ENST00000553309 RASGEF1BQ0VAM2 473 aa4.15□□□□□ -1.75
ATXN3-218ENST00000553309 ALCAMQ13740 583 aa4.15□□□□□ -1.75
ATXN3-218ENST00000553309 GRK1Q15835 563 aa4.15□□□□□ -1.75
ATXN3-218ENST00000553309 USF2Q15853 346 aaPredicted RBP4.15□□□□□ -1.75
ATXN3-218ENST00000553309 ZNF181Q2M3W8 571 aa4.15□□□□□ -1.75
ATXN3-218ENST00000553309 UGT3A2Q3SY77 523 aa4.15□□□□□ -1.75
ATXN3-218ENST00000553309 ACTBL2Q562R1 376 aa4.15□□□□□ -1.75
ATXN3-218ENST00000553309 CLLU1Q5K131 121 aa4.15□□□□□ -1.75
ATXN3-218ENST00000553309 ADAMTSL4-AS1Q5T5F5 129 aa4.15□□□□□ -1.75
ATXN3-218ENST00000553309 ARMC12Q5T9G4 340 aa4.15□□□□□ -1.75
ATXN3-218ENST00000553309 OGFRL1Q5TC84 451 aaPredicted RBP4.15□□□□□ -1.75
ATXN3-218ENST00000553309 PMF1Q6P1K2 205 aa4.15□□□□□ -1.75
ATXN3-218ENST00000553309 PNCKQ6P2M8 343 aa4.15□□□□□ -1.75
ATXN3-218ENST00000553309 TMPRSS11FQ6ZWK6 438 aa4.15□□□□□ -1.75
ATXN3-218ENST00000553309 PGAP1Q75T13 922 aa4.15□□□□□ -1.75
ATXN3-218ENST00000553309 APTXQ7Z2E3 356 aaKnown RBP4.15□□□□□ -1.75
ATXN3-218ENST00000553309 GALNT10Q86SR1 603 aa4.15□□□□□ -1.75
ATXN3-218ENST00000553309 SLC22A16Q86VW1 577 aa4.15□□□□□ -1.75
ATXN3-218ENST00000553309 ZNF679Q8IYX0 411 aa4.15□□□□□ -1.75
ATXN3-218ENST00000553309 GCNT2Q8N0V5 402 aa4.15□□□□□ -1.75
ATXN3-218ENST00000553309 MFSD9Q8NBP5 474 aa4.15□□□□□ -1.75
ATXN3-218ENST00000553309 KIAA0895Q8NCT3 520 aa4.15□□□□□ -1.75
ATXN3-218ENST00000553309 BHLHE23Q8NDY6 225 aa4.15□□□□□ -1.75
ATXN3-218ENST00000553309 C17orf47Q8NEP4 570 aa4.15□□□□□ -1.75
ATXN3-218ENST00000553309 OR2AP1Q8NGE2 309 aa4.15□□□□□ -1.75
ATXN3-218ENST00000553309 RNF128Q8TEB7 428 aa4.15□□□□□ -1.75
ATXN3-218ENST00000553309 AP2M1Q96CW1 435 aa4.15□□□□□ -1.75
ATXN3-218ENST00000553309 PDLIM5Q96HC4 596 aaKnown RBP4.15□□□□□ -1.75
ATXN3-218ENST00000553309 C14orf144Q96I85 54 aa4.15□□□□□ -1.75
ATXN3-218ENST00000553309 ZNF2Q9BSG1 426 aaPredicted RBP4.15□□□□□ -1.75
ATXN3-218ENST00000553309 NMUR2Q9GZQ4 415 aa4.15□□□□□ -1.75
ATXN3-218ENST00000553309 MIXL1Q9H2W2 232 aa4.15□□□□□ -1.75
ATXN3-218ENST00000553309 ANKRD19PQ9H560 264 aa4.15□□□□□ -1.75
ATXN3-218ENST00000553309 NANOGQ9H9S0 305 aa4.15□□□□□ -1.75
ATXN3-218ENST00000553309 KCNJ16Q9NPI9 418 aa4.15□□□□□ -1.75
ATXN3-218ENST00000553309 NANSQ9NR45 359 aa4.15□□□□□ -1.75
ATXN3-218ENST00000553309 PHPT1Q9NRX4 125 aaPredicted RBP4.15□□□□□ -1.75
ATXN3-218ENST00000553309 PNPLA3Q9NST1 481 aa4.15□□□□□ -1.75
ATXN3-218ENST00000553309 MED9Q9NWA0 146 aa4.15□□□□□ -1.75
ATXN3-218ENST00000553309 MCUBQ9NWR8 336 aa4.15□□□□□ -1.75
ATXN3-218ENST00000553309 SMPD3Q9NY59 655 aaPredicted RBP4.15□□□□□ -1.75
ATXN3-218ENST00000553309 FLRT3Q9NZU0 649 aa4.15□□□□□ -1.75
ATXN3-218ENST00000553309 COPZ2Q9P299 210 aa4.15□□□□□ -1.75
ATXN3-218ENST00000553309 PURGQ9UJV8 347 aaKnown RBP4.15□□□□□ -1.75
ATXN3-218ENST00000553309 RNF6Q9Y252 685 aa4.15□□□□□ -1.75
ATXN3-218ENST00000553309 KCNK6Q9Y257 313 aa4.15□□□□□ -1.75
ATXN3-218ENST00000553309 KCNIP3Q9Y2W7 256 aa4.15□□□□□ -1.75
ATXN3-218ENST00000553309 MMACHCQ9Y4U1 282 aa4.15□□□□□ -1.75
ATXN3-218ENST00000553309 PCYT1BQ9Y5K3 369 aaPredicted RBP4.15□□□□□ -1.75
ATXN3-218ENST00000553309 CLCA3PQ9Y6N3 262 aa4.15□□□□□ -1.75
ATXN3-218ENST00000553309 NUP210LQ5VU65 1888 aa4.15□□□□□ -1.75
ATXN3-218ENST00000553309 SPTBP11277 2137 aa4.15□□□□□ -1.75
ATXN3-218ENST00000553309 BIRC6Q9NR09 4857 aa4.15□□□□□ -1.75
ATXN3-218ENST00000553309 DOCK10Q96BY6 2186 aa4.14□□□□□ -1.75
ATXN3-218ENST00000553309 IGHV4-4A0A075B6R2 117 aa4.14□□□□□ -1.75
ATXN3-218ENST00000553309 A0A087WW49 117 aa4.14□□□□□ -1.75
ATXN3-218ENST00000553309 TRAV17A0A0B4J275 112 aa4.14□□□□□ -1.75
ATXN3-218ENST00000553309 MEX3AA1L020 520 aaKnown RBP4.14□□□□□ -1.75
ATXN3-218ENST00000553309 A6NIZ1 184 aa4.14□□□□□ -1.75
ATXN3-218ENST00000553309 ZNF716A6NP11 495 aa4.14□□□□□ -1.75
ATXN3-218ENST00000553309 WASHC1A8K0Z3 465 aa4.14□□□□□ -1.75
ATXN3-218ENST00000553309 C9J4A7 227 aa4.14□□□□□ -1.75
ATXN3-218ENST00000553309 E7ESA3 106 aa4.14□□□□□ -1.75
ATXN3-218ENST00000553309 LRRN3E7EW58 273 aa4.14□□□□□ -1.75
ATXN3-218ENST00000553309 NPIPA5E9PKD4 350 aa4.14□□□□□ -1.75
ATXN3-218ENST00000553309 H3BMQ9 156 aa4.14□□□□□ -1.75
ATXN3-218ENST00000553309 H3BNH8 94 aa4.14□□□□□ -1.75
ATXN3-218ENST00000553309 M0QYV0 167 aa4.14□□□□□ -1.75
ATXN3-218ENST00000553309 ATP6V0E1O15342 81 aa4.14□□□□□ -1.75
ATXN3-218ENST00000553309 RGS16O15492 202 aaPredicted RBP4.14□□□□□ -1.75
ATXN3-218ENST00000553309 FADS1O60427 444 aa4.14□□□□□ -1.75
ATXN3-218ENST00000553309 PLIN3O60664 434 aa4.14□□□□□ -1.75
ATXN3-218ENST00000553309 DNAJB6O75190 326 aa4.14□□□□□ -1.75
ATXN3-218ENST00000553309 MTX2O75431 263 aa4.14□□□□□ -1.75
ATXN3-218ENST00000553309 UGT2B17O75795 530 aa4.14□□□□□ -1.75
ATXN3-218ENST00000553309 EIF3GO75821 320 aaKnown RBP eCLIP4.14□□□□□ -1.75
ATXN3-218ENST00000553309 KLF7O75840 302 aaPredicted RBP4.14□□□□□ -1.75
ATXN3-218ENST00000553309 SRP72O76094 671 aaKnown RBP4.14□□□□□ -1.75
ATXN3-218ENST00000553309 GSRP00390 522 aa4.14□□□□□ -1.75
ATXN3-218ENST00000553309 SERPING1P05155 500 aa4.14□□□□□ -1.75
ATXN3-218ENST00000553309 ZNF735P0CB33 412 aa4.14□□□□□ -1.75
ATXN3-218ENST00000553309 RRASP10301 218 aa4.14□□□□□ -1.75
ATXN3-218ENST00000553309 IFI30P13284 250 aa4.14□□□□□ -1.75
ATXN3-218ENST00000553309 NCF1P14598 390 aaPredicted RBP4.14□□□□□ -1.75
ATXN3-218ENST00000553309 PTNP21246 168 aa4.14□□□□□ -1.75
ATXN3-218ENST00000553309 CCNOP22674 350 aa4.14□□□□□ -1.75
ATXN3-218ENST00000553309 MAP3K8P41279 467 aa4.14□□□□□ -1.75
ATXN3-218ENST00000553309 MAGEA2P43356 314 aa4.14□□□□□ -1.75
ATXN3-218ENST00000553309 NKX2-1P43699 371 aaPredicted RBP4.14□□□□□ -1.75
ATXN3-218ENST00000553309 RPS5P46782 204 aaKnown RBP4.14□□□□□ -1.75
ATXN3-218ENST00000553309 CAPZBP47756 277 aa4.14□□□□□ -1.75
ATXN3-218ENST00000553309 CEBPDP49716 269 aaPredicted RBP4.14□□□□□ -1.75
ATXN3-218ENST00000553309 PPP5CP53041 499 aa4.14□□□□□ -1.75
ATXN3-218ENST00000553309 RAD23AP54725 363 aa4.14□□□□□ -1.75
ATXN3-218ENST00000553309 NAGLUP54802 743 aa4.14□□□□□ -1.75
ATXN3-218ENST00000553309 UGT2B15P54855 530 aa4.14□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms