RNA–Protein interactions for RNA: ENST00000553308.1

SYNE2-209, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 4

Gene SYNE2, Length 557 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-209ENST00000553308 CDADC1Q9BWV3 514 aa7.57□□□□□ -1.2
SYNE2-209ENST00000553308 EMC7Q9NPA0 242 aa7.57□□□□□ -1.2
SYNE2-209ENST00000553308 NOX4Q9NPH5 578 aa7.57□□□□□ -1.2
SYNE2-209ENST00000553308 TBCCD1Q9NVR7 557 aa7.57□□□□□ -1.2
SYNE2-209ENST00000553308 MIOXQ9UGB7 285 aa7.57□□□□□ -1.2
SYNE2-209ENST00000553308 STARD10Q9Y365 291 aa7.57□□□□□ -1.2
SYNE2-209ENST00000553308 RNF114Q9Y508 228 aa7.57□□□□□ -1.2
SYNE2-209ENST00000553308 SLC22A31A6NKX4 558 aa7.56□□□□□ -1.2
SYNE2-209ENST00000553308 C12orf71A8MTZ7 269 aa7.56□□□□□ -1.2
SYNE2-209ENST00000553308 C22orf46C9J442 243 aa7.56□□□□□ -1.2
SYNE2-209ENST00000553308 H0YL77 283 aa7.56□□□□□ -1.2
SYNE2-209ENST00000553308 H7C1C5 153 aa7.56□□□□□ -1.2
SYNE2-209ENST00000553308 SFTPBP07988 381 aa7.56□□□□□ -1.2
SYNE2-209ENST00000553308 COX5BP10606 129 aa7.56□□□□□ -1.2
SYNE2-209ENST00000553308 CPT2P23786 658 aa7.56□□□□□ -1.2
SYNE2-209ENST00000553308 RBM34P42696 430 aaKnown RBP7.56□□□□□ -1.2
SYNE2-209ENST00000553308 IDH3AP50213 366 aa7.56□□□□□ -1.2
SYNE2-209ENST00000553308 TAS2R41P59536 307 aa7.56□□□□□ -1.2
SYNE2-209ENST00000553308 RPL27P61353 136 aaKnown RBP7.56□□□□□ -1.2
SYNE2-209ENST00000553308 LCN6P62502 163 aa7.56□□□□□ -1.2
SYNE2-209ENST00000553308 GUCY1A3Q02108 690 aa7.56□□□□□ -1.2
SYNE2-209ENST00000553308 HLXQ14774 488 aaPredicted RBP7.56□□□□□ -1.2
SYNE2-209ENST00000553308 TAF9Q16594 264 aa7.56□□□□□ -1.2
SYNE2-209ENST00000553308 ZNF404Q494X3 552 aa7.56□□□□□ -1.2
SYNE2-209ENST00000553308 OTPQ5XKR4 325 aa7.56□□□□□ -1.2
SYNE2-209ENST00000553308 FAM205BPQ63HN1 556 aa7.56□□□□□ -1.2
SYNE2-209ENST00000553308 C1orf94Q6P1W5 598 aa7.56□□□□□ -1.2
SYNE2-209ENST00000553308 LYPD2Q6UXB3 125 aa7.56□□□□□ -1.2
SYNE2-209ENST00000553308 NLRC3Q7RTR2 1065 aa7.56□□□□□ -1.2
SYNE2-209ENST00000553308 DHDDSQ86SQ9 333 aa7.56□□□□□ -1.2
SYNE2-209ENST00000553308 PATL1Q86TB9 770 aaKnown RBP7.56□□□□□ -1.2
SYNE2-209ENST00000553308 MOGAT3Q86VF5 341 aa7.56□□□□□ -1.2
SYNE2-209ENST00000553308 SLC30A8Q8IWU4 369 aa7.56□□□□□ -1.2
SYNE2-209ENST00000553308 LINC01006Q8NI28 216 aa7.56□□□□□ -1.2
SYNE2-209ENST00000553308 C10orf82Q8WW14 230 aa7.56□□□□□ -1.2
SYNE2-209ENST00000553308 TMEM239Q8WW34 195 aa7.56□□□□□ -1.2
SYNE2-209ENST00000553308 RBP7Q96R05 134 aa7.56□□□□□ -1.2
SYNE2-209ENST00000553308 PCGF1Q9BSM1 259 aa7.56□□□□□ -1.2
SYNE2-209ENST00000553308 POLE4Q9NR33 117 aa7.56□□□□□ -1.2
SYNE2-209ENST00000553308 CLN8Q9UBY8 286 aa7.56□□□□□ -1.2
SYNE2-209ENST00000553308 HIF3AQ9Y2N7 669 aa7.56□□□□□ -1.2
SYNE2-209ENST00000553308 SH3GLB1Q9Y371 365 aa7.56□□□□□ -1.2
SYNE2-209ENST00000553308 F5H5P2 479 aa7.55□□□□□ -1.2
SYNE2-209ENST00000553308 IFNL4K9M1U5 179 aa7.55□□□□□ -1.2
SYNE2-209ENST00000553308 TNFRSF13BO14836 293 aaPredicted RBP7.55□□□□□ -1.2
SYNE2-209ENST00000553308 MLNRO43193 412 aa7.55□□□□□ -1.2
SYNE2-209ENST00000553308 SGCEO43556 437 aa7.55□□□□□ -1.2
SYNE2-209ENST00000553308 ENSAO43768 121 aaKnown RBP7.55□□□□□ -1.2
SYNE2-209ENST00000553308 GPR137BO60478 399 aa7.55□□□□□ -1.2
SYNE2-209ENST00000553308 CLPXO76031 633 aa7.55□□□□□ -1.2
SYNE2-209ENST00000553308 OR5F1O95221 314 aa7.55□□□□□ -1.2
SYNE2-209ENST00000553308 IGF2P01344 180 aa7.55□□□□□ -1.2
SYNE2-209ENST00000553308 VIMP08670 466 aaKnown RBP7.55□□□□□ -1.2
SYNE2-209ENST00000553308 RAC2P15153 192 aa7.55□□□□□ -1.2
SYNE2-209ENST00000553308 TUBG1P23258 451 aa7.55□□□□□ -1.2
SYNE2-209ENST00000553308 CFHR2P36980 270 aa7.55□□□□□ -1.2
SYNE2-209ENST00000553308 PMELP40967 661 aa7.55□□□□□ -1.2
SYNE2-209ENST00000553308 GUCA1AP43080 201 aaPredicted RBP7.55□□□□□ -1.2
SYNE2-209ENST00000553308 PROK1P58294 105 aa7.55□□□□□ -1.2
SYNE2-209ENST00000553308 CTXN1P60606 82 aa7.55□□□□□ -1.2
SYNE2-209ENST00000553308 SCRN3Q0VDG4 424 aa7.55□□□□□ -1.2
SYNE2-209ENST00000553308 PIN1Q13526 163 aaPredicted RBP7.55□□□□□ -1.2
SYNE2-209ENST00000553308 PDCD1Q15116 288 aa7.55□□□□□ -1.2
SYNE2-209ENST00000553308 WDR25Q64LD2 544 aaPredicted RBP7.55□□□□□ -1.2
SYNE2-209ENST00000553308 OR2T2Q6IF00 324 aa7.55□□□□□ -1.2
SYNE2-209ENST00000553308 ZNF620Q6ZNG0 422 aa7.55□□□□□ -1.2
SYNE2-209ENST00000553308 VASH1Q7L8A9 365 aaPredicted RBP7.55□□□□□ -1.2
SYNE2-209ENST00000553308 SYT9Q86SS6 491 aa7.55□□□□□ -1.2
SYNE2-209ENST00000553308 MICU2Q8IYU8 434 aa7.55□□□□□ -1.2
SYNE2-209ENST00000553308 TMEM86BQ8N661 226 aa7.55□□□□□ -1.2
SYNE2-209ENST00000553308 LRRC75AQ8NAA5 344 aa7.55□□□□□ -1.2
SYNE2-209ENST00000553308 C19orf18Q8NEA5 215 aa7.55□□□□□ -1.2
SYNE2-209ENST00000553308 OR10A6Q8NH74 314 aa7.55□□□□□ -1.2
SYNE2-209ENST00000553308 FAM110DQ8TAY7 271 aaPredicted RBP7.55□□□□□ -1.2
SYNE2-209ENST00000553308 SSMEM1Q8WWF3 244 aa7.55□□□□□ -1.2
SYNE2-209ENST00000553308 FAM71F1Q96KD3 344 aaPredicted RBP7.55□□□□□ -1.2
SYNE2-209ENST00000553308 CGREF1Q99674 301 aa7.55□□□□□ -1.2
SYNE2-209ENST00000553308 SLC30A2Q9BRI3 323 aa7.55□□□□□ -1.2
SYNE2-209ENST00000553308 KAT8Q9H7Z6 458 aaKnown RBP7.55□□□□□ -1.2
SYNE2-209ENST00000553308 TCF7L1Q9HCS4 588 aa7.55□□□□□ -1.2
SYNE2-209ENST00000553308 TUBG2Q9NRH3 451 aa7.55□□□□□ -1.2
SYNE2-209ENST00000553308 NKIRAS1Q9NYS0 192 aa7.55□□□□□ -1.2
SYNE2-209ENST00000553308 PTTG3PQ9NZH4 202 aa7.55□□□□□ -1.2
SYNE2-209ENST00000553308 ASH2LQ9UBL3 628 aa7.55□□□□□ -1.2
SYNE2-209ENST00000553308 RIMS3Q9UJD0 308 aa7.55□□□□□ -1.2
SYNE2-209ENST00000553308 MED31Q9Y3C7 131 aa7.55□□□□□ -1.2
SYNE2-209ENST00000553308 POMT1Q9Y6A1 747 aa7.55□□□□□ -1.2
SYNE2-209ENST00000553308 CMYA5Q8N3K9 4069 aa7.54□□□□□ -1.2
SYNE2-209ENST00000553308 TRAV27A0A087WT01 109 aa7.54□□□□□ -1.2
SYNE2-209ENST00000553308 CENPVL3A0A0U1RRI6 287 aa7.54□□□□□ -1.2
SYNE2-209ENST00000553308 PHYHO14832 338 aa7.54□□□□□ -1.2
SYNE2-209ENST00000553308 ALX3O95076 343 aa7.54□□□□□ -1.2
SYNE2-209ENST00000553308 IGHV4-59P01825 116 aa7.54□□□□□ -1.2
SYNE2-209ENST00000553308 DBHP09172 617 aa7.54□□□□□ -1.2
SYNE2-209ENST00000553308 IFI30P13284 250 aa7.54□□□□□ -1.2
SYNE2-209ENST00000553308 MMP9P14780 707 aa7.54□□□□□ -1.2
SYNE2-209ENST00000553308 FUT4P22083 530 aa7.54□□□□□ -1.2
SYNE2-209ENST00000553308 OR1E2P47887 323 aa7.54□□□□□ -1.2
SYNE2-209ENST00000553308 SRP9P49458 86 aaKnown RBP7.54□□□□□ -1.2
SYNE2-209ENST00000553308 SLC18A1P54219 525 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms