RNA–Protein interactions for RNA: ENST00000553128.5

VPS29-211, Transcript of VPS29, retromer complex component, humanhuman

TSL 3

Gene VPS29, Length 449 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-211ENST00000553128 ALDH16A1Q8IZ83 802 aa10.66□□□□□ -0.7
VPS29-211ENST00000553128 OR6T1Q8NGN1 323 aa10.66□□□□□ -0.7
VPS29-211ENST00000553128 MOSPD2Q8NHP6 518 aa10.66□□□□□ -0.7
VPS29-211ENST00000553128 SLC7A6Q92536 515 aa10.66□□□□□ -0.7
VPS29-211ENST00000553128 HIST1H2ACQ93077 130 aa10.66□□□□□ -0.7
VPS29-211ENST00000553128 PHF21AQ96BD5 680 aa10.66□□□□□ -0.7
VPS29-211ENST00000553128 TECTBQ96PL2 329 aa10.66□□□□□ -0.7
VPS29-211ENST00000553128 SPATA5L1Q9BVQ7 753 aa10.66□□□□□ -0.7
VPS29-211ENST00000553128 RAD21L1Q9H4I0 556 aa10.66□□□□□ -0.7
VPS29-211ENST00000553128 RMND5AQ9H871 391 aa10.66□□□□□ -0.7
VPS29-211ENST00000553128 TBCCD1Q9NVR7 557 aa10.66□□□□□ -0.7
VPS29-211ENST00000553128 SLAMF8Q9P0V8 285 aa10.66□□□□□ -0.7
VPS29-211ENST00000553128 SLC7A7Q9UM01 511 aa10.66□□□□□ -0.7
VPS29-211ENST00000553128 ANGPT4Q9Y264 503 aa10.66□□□□□ -0.7
VPS29-211ENST00000553128 TIMM10BQ9Y5J6 103 aa10.66□□□□□ -0.7
VPS29-211ENST00000553128 CENPBD1B2RD01 187 aa10.65□□□□□ -0.7
VPS29-211ENST00000553128 MPIG6BO95866 241 aa10.65□□□□□ -0.7
VPS29-211ENST00000553128 PRB3Q04118 309 aaPredicted RBP10.65□□□□□ -0.7
VPS29-211ENST00000553128 CD47Q08722 323 aa10.65□□□□□ -0.7
VPS29-211ENST00000553128 OR2T2Q6IF00 324 aa10.65□□□□□ -0.7
VPS29-211ENST00000553128 C1orf94Q6P1W5 598 aa10.65□□□□□ -0.7
VPS29-211ENST00000553128 DCDC5Q6ZRR9 648 aa10.65□□□□□ -0.7
VPS29-211ENST00000553128 Q6ZTK2 550 aa10.65□□□□□ -0.7
VPS29-211ENST00000553128 KRT73Q86Y46 540 aa10.65□□□□□ -0.7
VPS29-211ENST00000553128 SCCPDHQ8NBX0 429 aa10.65□□□□□ -0.7
VPS29-211ENST00000553128 NPEPL1Q8NDH3 523 aa10.65□□□□□ -0.7
VPS29-211ENST00000553128 PFN4Q8NHR9 129 aa10.65□□□□□ -0.7
VPS29-211ENST00000553128 ZNF426Q9BUY5 554 aa10.65□□□□□ -0.7
VPS29-211ENST00000553128 DPAGT1Q9H3H5 408 aa10.65□□□□□ -0.7
VPS29-211ENST00000553128 IKZF5Q9H5V7 419 aa10.65□□□□□ -0.7
VPS29-211ENST00000553128 SMURF2Q9HAU4 748 aa10.65□□□□□ -0.7
VPS29-211ENST00000553128 SMURF1Q9HCE7 757 aa10.65□□□□□ -0.7
VPS29-211ENST00000553128 KIF17Q9P2E2 1029 aa10.65□□□□□ -0.7
VPS29-211ENST00000553128 VPREB3Q9UKI3 123 aa10.65□□□□□ -0.7
VPS29-211ENST00000553128 TMCC3Q9ULS5 477 aa10.65□□□□□ -0.7
VPS29-211ENST00000553128 K7EIL1 84 aa10.64□□□□□ -0.71
VPS29-211ENST00000553128 IFNL4K9M1U5 179 aa10.64□□□□□ -0.71
VPS29-211ENST00000553128 FSTL3O95633 263 aa10.64□□□□□ -0.71
VPS29-211ENST00000553128 OPN1SWP03999 348 aa10.64□□□□□ -0.71
VPS29-211ENST00000553128 POLR2JP52435 117 aaKnown RBP10.64□□□□□ -0.71
VPS29-211ENST00000553128 ARF6P62330 175 aa10.64□□□□□ -0.71
VPS29-211ENST00000553128 GUCY1A3Q02108 690 aa10.64□□□□□ -0.71
VPS29-211ENST00000553128 SCARB2Q14108 478 aa10.64□□□□□ -0.71
VPS29-211ENST00000553128 DUSP7Q16829 419 aa10.64□□□□□ -0.71
VPS29-211ENST00000553128 ZNF181Q2M3W8 571 aa10.64□□□□□ -0.71
VPS29-211ENST00000553128 FOXB2Q5VYV0 432 aa10.64□□□□□ -0.71
VPS29-211ENST00000553128 ARL9Q6T311 187 aa10.64□□□□□ -0.71
VPS29-211ENST00000553128 C1orf122Q6ZSJ8 110 aa10.64□□□□□ -0.71
VPS29-211ENST00000553128 MSANTD1Q6ZTZ1 278 aa10.64□□□□□ -0.71
VPS29-211ENST00000553128 PTOV1Q86YD1 416 aa10.64□□□□□ -0.71
VPS29-211ENST00000553128 ARMC8Q8IUR7 673 aa10.64□□□□□ -0.71
VPS29-211ENST00000553128 GPR32P1Q8NGA4 272 aa10.64□□□□□ -0.71
VPS29-211ENST00000553128 PPP1R35Q8TAP8 253 aa10.64□□□□□ -0.71
VPS29-211ENST00000553128 ADAMTS16Q8TE57 1224 aa10.64□□□□□ -0.71
VPS29-211ENST00000553128 CFHR4Q92496 578 aa10.64□□□□□ -0.71
VPS29-211ENST00000553128 PRSS27Q9BQR3 290 aa10.64□□□□□ -0.71
VPS29-211ENST00000553128 EMC7Q9NPA0 242 aa10.64□□□□□ -0.71
VPS29-211ENST00000553128 INIPQ9NRY2 104 aa10.64□□□□□ -0.71
VPS29-211ENST00000553128 ZNRD1Q9P1U0 126 aa10.64□□□□□ -0.71
VPS29-211ENST00000553128 SLC13A4Q9UKG4 626 aa10.64□□□□□ -0.71
VPS29-211ENST00000553128 USH1CQ9Y6N9 552 aa10.64□□□□□ -0.71
VPS29-211ENST00000553128 A0A1W2PPL8 197 aa10.63□□□□□ -0.71
VPS29-211ENST00000553128 PRORSD1PA6NEY8 169 aa10.63□□□□□ -0.71
VPS29-211ENST00000553128 HLA-DPB1P04440 258 aa10.63□□□□□ -0.71
VPS29-211ENST00000553128 IDO1P14902 403 aa10.63□□□□□ -0.71
VPS29-211ENST00000553128 HTR5AP47898 357 aa10.63□□□□□ -0.71
VPS29-211ENST00000553128 DAP3P51398 398 aaKnown RBP10.63□□□□□ -0.71
VPS29-211ENST00000553128 DLX1P56177 255 aa10.63□□□□□ -0.71
VPS29-211ENST00000553128 PRSS12P56730 875 aa10.63□□□□□ -0.71
VPS29-211ENST00000553128 TOP3AQ13472 1001 aaPredicted RBP10.63□□□□□ -0.71
VPS29-211ENST00000553128 LAPTM4AQ15012 233 aa10.63□□□□□ -0.71
VPS29-211ENST00000553128 METTL11BQ5VVY1 283 aa10.63□□□□□ -0.71
VPS29-211ENST00000553128 OTPQ5XKR4 325 aa10.63□□□□□ -0.71
VPS29-211ENST00000553128 NXNQ6DKJ4 435 aa10.63□□□□□ -0.71
VPS29-211ENST00000553128 FOXL2NBQ6ZUU3 175 aa10.63□□□□□ -0.71
VPS29-211ENST00000553128 VASH1Q7L8A9 365 aaPredicted RBP10.63□□□□□ -0.71
VPS29-211ENST00000553128 OR8G5Q8NG78 346 aa10.63□□□□□ -0.71
VPS29-211ENST00000553128 LRTOMTQ8WZ04 291 aa10.63□□□□□ -0.71
VPS29-211ENST00000553128 PTP4A1Q93096 173 aa10.63□□□□□ -0.71
VPS29-211ENST00000553128 MAGEB18Q96M61 343 aa10.63□□□□□ -0.71
VPS29-211ENST00000553128 PPA2Q9H2U2 334 aa10.63□□□□□ -0.71
VPS29-211ENST00000553128 MMADHCQ9H3L0 296 aaPredicted RBP10.63□□□□□ -0.71
VPS29-211ENST00000553128 SDR39U1Q9NRG7 319 aaPredicted RBP10.63□□□□□ -0.71
VPS29-211ENST00000553128 C20orf141Q9NUB4 165 aa10.63□□□□□ -0.71
VPS29-211ENST00000553128 PTTG3PQ9NZH4 202 aa10.63□□□□□ -0.71
VPS29-211ENST00000553128 ZIM2Q9NZV7 527 aa10.63□□□□□ -0.71
VPS29-211ENST00000553128 FBLN5Q9UBX5 448 aa10.63□□□□□ -0.71
VPS29-211ENST00000553128 NDRG4Q9ULP0 352 aaKnown RBP10.63□□□□□ -0.71
VPS29-211ENST00000553128 LRRC30A6NM36 301 aa10.62□□□□□ -0.71
VPS29-211ENST00000553128 BIRC5O15392 142 aa10.62□□□□□ -0.71
VPS29-211ENST00000553128 DOK2O60496 412 aa10.62□□□□□ -0.71
VPS29-211ENST00000553128 RAC2P15153 192 aa10.62□□□□□ -0.71
VPS29-211ENST00000553128 FUT1P19526 365 aa10.62□□□□□ -0.71
VPS29-211ENST00000553128 GABRA5P31644 462 aa10.62□□□□□ -0.71
VPS29-211ENST00000553128 TGFBR2P37173 567 aa10.62□□□□□ -0.71
VPS29-211ENST00000553128 SRP9P49458 86 aaKnown RBP10.62□□□□□ -0.71
VPS29-211ENST00000553128 EFNB2P52799 333 aa10.62□□□□□ -0.71
VPS29-211ENST00000553128 PCBD1P61457 104 aa10.62□□□□□ -0.71
VPS29-211ENST00000553128 STX3Q13277 289 aa10.62□□□□□ -0.71
VPS29-211ENST00000553128 MAB21L1Q13394 359 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms