RNA–Protein interactions for RNA: ENST00000553039.1

CKAP4-203, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 4

Gene CKAP4, Length 573 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-203ENST00000553039 RANBP3Q9H6Z4 567 aaPredicted RBP4.25□□□□□ -1.73
CKAP4-203ENST00000553039 TMBIM4Q9HC24 238 aa4.25□□□□□ -1.73
CKAP4-203ENST00000553039 ZCCHC3Q9NUD5 404 aaKnown RBP4.25□□□□□ -1.73
CKAP4-203ENST00000553039 SH3BP4Q9P0V3 963 aa4.25□□□□□ -1.73
CKAP4-203ENST00000553039 OSGIN1Q9UJX0 560 aa4.25□□□□□ -1.73
CKAP4-203ENST00000553039 NDRG4Q9ULP0 352 aaKnown RBP4.25□□□□□ -1.73
CKAP4-203ENST00000553039 PPP1R3CQ9UQK1 317 aa4.25□□□□□ -1.73
CKAP4-203ENST00000553039 SIGLEC9Q9Y336 463 aa4.25□□□□□ -1.73
CKAP4-203ENST00000553039 TCRBV9S1A1TA0A576 114 aa4.24□□□□□ -1.73
CKAP4-203ENST00000553039 TMEM72A0PK05 275 aa4.24□□□□□ -1.73
CKAP4-203ENST00000553039 UBE2QL1A1L167 161 aa4.24□□□□□ -1.73
CKAP4-203ENST00000553039 ZNF503-AS2A6NEH8 195 aa4.24□□□□□ -1.73
CKAP4-203ENST00000553039 LRRC30A6NM36 301 aa4.24□□□□□ -1.73
CKAP4-203ENST00000553039 ZNF726A6NNF4 738 aa4.24□□□□□ -1.73
CKAP4-203ENST00000553039 A8MVM7 634 aa4.24□□□□□ -1.73
CKAP4-203ENST00000553039 TMEM178BH3BS89 294 aa4.24□□□□□ -1.73
CKAP4-203ENST00000553039 M0R3G1 203 aa4.24□□□□□ -1.73
CKAP4-203ENST00000553039 PHYHO14832 338 aa4.24□□□□□ -1.73
CKAP4-203ENST00000553039 KLHL2O95198 593 aa4.24□□□□□ -1.73
CKAP4-203ENST00000553039 FARS2O95363 451 aaKnown RBP4.24□□□□□ -1.73
CKAP4-203ENST00000553039 SNAP29O95721 258 aa4.24□□□□□ -1.73
CKAP4-203ENST00000553039 CHRM2P08172 466 aa4.24□□□□□ -1.73
CKAP4-203ENST00000553039 TFPTP0C1Z6 253 aa4.24□□□□□ -1.73
CKAP4-203ENST00000553039 CD28P10747 220 aa4.24□□□□□ -1.73
CKAP4-203ENST00000553039 ZNF26P17031 533 aaPredicted RBP4.24□□□□□ -1.73
CKAP4-203ENST00000553039 AHCYP23526 432 aa4.24□□□□□ -1.73
CKAP4-203ENST00000553039 CHATP28329 748 aa4.24□□□□□ -1.73
CKAP4-203ENST00000553039 TACR3P29371 465 aa4.24□□□□□ -1.73
CKAP4-203ENST00000553039 HOXD3P31249 432 aaPredicted RBP4.24□□□□□ -1.73
CKAP4-203ENST00000553039 RPL4P36578 427 aaKnown RBP4.24□□□□□ -1.73
CKAP4-203ENST00000553039 CCT3P49368 545 aaKnown RBP4.24□□□□□ -1.73
CKAP4-203ENST00000553039 MMP15P51511 669 aa4.24□□□□□ -1.73
CKAP4-203ENST00000553039 FAM3BP58499 235 aaPredicted RBP4.24□□□□□ -1.73
CKAP4-203ENST00000553039 TIRAPP58753 221 aa4.24□□□□□ -1.73
CKAP4-203ENST00000553039 KCNJ10P78508 379 aa4.24□□□□□ -1.73
CKAP4-203ENST00000553039 GABPB1Q06547 395 aaPredicted RBP4.24□□□□□ -1.73
CKAP4-203ENST00000553039 COX10Q12887 443 aa4.24□□□□□ -1.73
CKAP4-203ENST00000553039 LASP1Q14847 261 aaKnown RBP4.24□□□□□ -1.73
CKAP4-203ENST00000553039 LSM12Q3MHD2 195 aaKnown RBP4.24□□□□□ -1.73
CKAP4-203ENST00000553039 TCTEX1D4Q5JR98 221 aa4.24□□□□□ -1.73
CKAP4-203ENST00000553039 THEM4Q5T1C6 240 aa4.24□□□□□ -1.73
CKAP4-203ENST00000553039 CCDC144NLQ6NUI1 221 aa4.24□□□□□ -1.73
CKAP4-203ENST00000553039 ZNF774Q6NX45 483 aa4.24□□□□□ -1.73
CKAP4-203ENST00000553039 NHLRC1Q6VVB1 395 aa4.24□□□□□ -1.73
CKAP4-203ENST00000553039 ADAMTSL5Q6ZMM2 481 aa4.24□□□□□ -1.73
CKAP4-203ENST00000553039 C3orf62Q6ZUJ4 267 aa4.24□□□□□ -1.73
CKAP4-203ENST00000553039 PIGWQ7Z7B1 504 aa4.24□□□□□ -1.73
CKAP4-203ENST00000553039 SATL1Q86VE3 508 aa4.24□□□□□ -1.73
CKAP4-203ENST00000553039 OR56A1Q8NGH5 318 aa4.24□□□□□ -1.73
CKAP4-203ENST00000553039 OR1J1Q8NGS3 322 aa4.24□□□□□ -1.73
CKAP4-203ENST00000553039 OR14K1Q8NGZ2 314 aa4.24□□□□□ -1.73
CKAP4-203ENST00000553039 IL17DQ8TAD2 202 aa4.24□□□□□ -1.73
CKAP4-203ENST00000553039 LHX4Q969G2 390 aa4.24□□□□□ -1.73
CKAP4-203ENST00000553039 DACT3Q96B18 629 aaPredicted RBP4.24□□□□□ -1.73
CKAP4-203ENST00000553039 MOAP1Q96BY2 351 aa4.24□□□□□ -1.73
CKAP4-203ENST00000553039 PPCDCQ96CD2 204 aa4.24□□□□□ -1.73
CKAP4-203ENST00000553039 CCDC126Q96EE4 140 aa4.24□□□□□ -1.73
CKAP4-203ENST00000553039 METTL2AQ96IZ6 378 aaKnown RBP4.24□□□□□ -1.73
CKAP4-203ENST00000553039 GPR78Q96P69 363 aa4.24□□□□□ -1.73
CKAP4-203ENST00000553039 RCHY1Q96PM5 261 aa4.24□□□□□ -1.73
CKAP4-203ENST00000553039 CITED2Q99967 270 aaPredicted RBP4.24□□□□□ -1.73
CKAP4-203ENST00000553039 DCTN5Q9BTE1 182 aa4.24□□□□□ -1.73
CKAP4-203ENST00000553039 TEX12Q9BXU0 123 aa4.24□□□□□ -1.73
CKAP4-203ENST00000553039 EBPLQ9BY08 206 aa4.24□□□□□ -1.73
CKAP4-203ENST00000553039 EXOSC3Q9NQT5 275 aaKnown RBP4.24□□□□□ -1.73
CKAP4-203ENST00000553039 MAN2C1Q9NTJ4 1040 aa4.24□□□□□ -1.73
CKAP4-203ENST00000553039 VSX1Q9NZR4 365 aaPredicted RBP4.24□□□□□ -1.73
CKAP4-203ENST00000553039 PSMC3IPQ9P2W1 217 aaPredicted RBP4.24□□□□□ -1.73
CKAP4-203ENST00000553039 ERVK-18Q9QC07 812 aa4.24□□□□□ -1.73
CKAP4-203ENST00000553039 IL19Q9UHD0 177 aa4.24□□□□□ -1.73
CKAP4-203ENST00000553039 STEAP1Q9UHE8 339 aa4.24□□□□□ -1.73
CKAP4-203ENST00000553039 LGALS13Q9UHV8 139 aa4.24□□□□□ -1.73
CKAP4-203ENST00000553039 PCTPQ9UKL6 214 aa4.24□□□□□ -1.73
CKAP4-203ENST00000553039 CCL27Q9Y4X3 112 aa4.24□□□□□ -1.73
CKAP4-203ENST00000553039 MAB21L2Q9Y586 359 aa4.24□□□□□ -1.73
CKAP4-203ENST00000553039 A0A096LPI6 279 aa4.23□□□□□ -1.73
CKAP4-203ENST00000553039 LOC102725191A0A1B0GVB3 256 aa4.23□□□□□ -1.73
CKAP4-203ENST00000553039 C9orf118A6NHY6 69 aa4.23□□□□□ -1.73
CKAP4-203ENST00000553039 PPP6CO00743 305 aa4.23□□□□□ -1.73
CKAP4-203ENST00000553039 ADAM20O43506 726 aa4.23□□□□□ -1.73
CKAP4-203ENST00000553039 TBX19O60806 448 aa4.23□□□□□ -1.73
CKAP4-203ENST00000553039 OR4F21O95013 312 aa4.23□□□□□ -1.73
CKAP4-203ENST00000553039 MFN2O95140 757 aa4.23□□□□□ -1.73
CKAP4-203ENST00000553039 ECDO95905 644 aaPredicted RBP4.23□□□□□ -1.73
CKAP4-203ENST00000553039 LHBP01229 141 aa4.23□□□□□ -1.73
CKAP4-203ENST00000553039 C2P06681 752 aa4.23□□□□□ -1.73
CKAP4-203ENST00000553039 GUSBP08236 651 aa4.23□□□□□ -1.73
CKAP4-203ENST00000553039 INHBAP08476 426 aa4.23□□□□□ -1.73
CKAP4-203ENST00000553039 CCDC159P0C7I6 412 aa4.23□□□□□ -1.73
CKAP4-203ENST00000553039 PAICSP22234 425 aaKnown RBP4.23□□□□□ -1.73
CKAP4-203ENST00000553039 TUBG1P23258 451 aa4.23□□□□□ -1.73
CKAP4-203ENST00000553039 SSTR1P30872 391 aa4.23□□□□□ -1.73
CKAP4-203ENST00000553039 APLNRP35414 380 aa4.23□□□□□ -1.73
CKAP4-203ENST00000553039 PCP4P48539 62 aa4.23□□□□□ -1.73
CKAP4-203ENST00000553039 PPP5CP53041 499 aa4.23□□□□□ -1.73
CKAP4-203ENST00000553039 AQP5P55064 265 aa4.23□□□□□ -1.73
CKAP4-203ENST00000553039 GP2P55259 537 aaKnown RBP4.23□□□□□ -1.73
CKAP4-203ENST00000553039 MAGOHP61326 146 aaKnown RBP4.23□□□□□ -1.73
CKAP4-203ENST00000553039 COPZ1P61923 177 aa4.23□□□□□ -1.73
CKAP4-203ENST00000553039 GLO1Q04760 184 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms