RNA–Protein interactions for RNA: ENST00000553011.5

PTCH1-226, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 1,037 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-226ENST00000553011 ADAM8P78325 824 aa12.15□□□□□ -0.46
PTCH1-226ENST00000553011 RAB35Q15286 201 aa12.15□□□□□ -0.46
PTCH1-226ENST00000553011 EFNB3Q15768 340 aa12.15□□□□□ -0.46
PTCH1-226ENST00000553011 SNAPC1Q16533 368 aa12.15□□□□□ -0.46
PTCH1-226ENST00000553011 SLX4IPQ5VYV7 408 aa12.15□□□□□ -0.46
PTCH1-226ENST00000553011 TMEM154Q6P9G4 183 aa12.15□□□□□ -0.46
PTCH1-226ENST00000553011 CFAP77Q6ZQR2 320 aa12.15□□□□□ -0.46
PTCH1-226ENST00000553011 LRP11Q86VZ4 500 aa12.15□□□□□ -0.46
PTCH1-226ENST00000553011 ZNF101Q8IZC7 436 aa12.15□□□□□ -0.46
PTCH1-226ENST00000553011 PQLC1Q8N2U9 271 aa12.15□□□□□ -0.46
PTCH1-226ENST00000553011 BBS1Q8NFJ9 593 aa12.15□□□□□ -0.46
PTCH1-226ENST00000553011 GJC3Q8NFK1 279 aa12.15□□□□□ -0.46
PTCH1-226ENST00000553011 OR1F12Q8NHA8 337 aa12.15□□□□□ -0.46
PTCH1-226ENST00000553011 MRPL24Q96A35 216 aaKnown RBP12.15□□□□□ -0.46
PTCH1-226ENST00000553011 RBM4BQ9BQ04 359 aaKnown RBP12.15□□□□□ -0.46
PTCH1-226ENST00000553011 CDADC1Q9BWV3 514 aa12.15□□□□□ -0.46
PTCH1-226ENST00000553011 TEX12Q9BXU0 123 aa12.15□□□□□ -0.46
PTCH1-226ENST00000553011 MRPL37Q9BZE1 423 aaKnown RBP12.15□□□□□ -0.46
PTCH1-226ENST00000553011 RIBC2Q9H4K1 309 aa12.15□□□□□ -0.46
PTCH1-226ENST00000553011 CYB5R1Q9UHQ9 305 aa12.15□□□□□ -0.46
PTCH1-226ENST00000553011 GDF2Q9UK05 429 aaPredicted RBP12.15□□□□□ -0.46
PTCH1-226ENST00000553011 NDRG4Q9ULP0 352 aaKnown RBP12.15□□□□□ -0.46
PTCH1-226ENST00000553011 TLN2Q9Y4G6 2542 aa12.14□□□□□ -0.47
PTCH1-226ENST00000553011 VSTM5A8MXK1 200 aa12.14□□□□□ -0.47
PTCH1-226ENST00000553011 B9A039 149 aa12.14□□□□□ -0.47
PTCH1-226ENST00000553011 PRKYO43930 277 aa12.14□□□□□ -0.47
PTCH1-226ENST00000553011 BAG2O95816 211 aa12.14□□□□□ -0.47
PTCH1-226ENST00000553011 NGFP01138 241 aa12.14□□□□□ -0.47
PTCH1-226ENST00000553011 IGHV4-39P01824 125 aa12.14□□□□□ -0.47
PTCH1-226ENST00000553011 ALPLP05186 524 aa12.14□□□□□ -0.47
PTCH1-226ENST00000553011 DBHP09172 617 aa12.14□□□□□ -0.47
PTCH1-226ENST00000553011 ENTPD1P49961 510 aa12.14□□□□□ -0.47
PTCH1-226ENST00000553011 SNRPD2P62316 118 aaKnown RBP12.14□□□□□ -0.47
PTCH1-226ENST00000553011 Q5PR19 223 aa12.14□□□□□ -0.47
PTCH1-226ENST00000553011 ELFN2Q5R3F8 820 aa12.14□□□□□ -0.47
PTCH1-226ENST00000553011 C12orf73Q69YU5 71 aa12.14□□□□□ -0.47
PTCH1-226ENST00000553011 RGS7BPQ6MZT1 257 aaPredicted RBP12.14□□□□□ -0.47
PTCH1-226ENST00000553011 RFPL4BQ6ZWI9 263 aa12.14□□□□□ -0.47
PTCH1-226ENST00000553011 CXXC5Q7LFL8 322 aaKnown RBP12.14□□□□□ -0.47
PTCH1-226ENST00000553011 CBR4Q8N4T8 237 aa12.14□□□□□ -0.47
PTCH1-226ENST00000553011 WFDC11Q8NEX6 87 aa12.14□□□□□ -0.47
PTCH1-226ENST00000553011 OR2AJ1Q8NGZ0 328 aa12.14□□□□□ -0.47
PTCH1-226ENST00000553011 STMN2Q93045 179 aa12.14□□□□□ -0.47
PTCH1-226ENST00000553011 TRMT61AQ96FX7 289 aaKnown RBP12.14□□□□□ -0.47
PTCH1-226ENST00000553011 MAP6Q96JE9 813 aa12.14□□□□□ -0.47
PTCH1-226ENST00000553011 SYT3Q9BQG1 590 aa12.14□□□□□ -0.47
PTCH1-226ENST00000553011 GABARAPL3Q9BY60 117 aa12.14□□□□□ -0.47
PTCH1-226ENST00000553011 PLK3Q9H4B4 646 aa12.14□□□□□ -0.47
PTCH1-226ENST00000553011 MYEF2Q9P2K5 600 aaKnown RBP12.14□□□□□ -0.47
PTCH1-226ENST00000553011 EIF3KQ9UBQ5 218 aaKnown RBP12.14□□□□□ -0.47
PTCH1-226ENST00000553011 ENOPH1Q9UHY7 261 aa12.14□□□□□ -0.47
PTCH1-226ENST00000553011 KCNG2Q9UJ96 466 aa12.14□□□□□ -0.47
PTCH1-226ENST00000553011 MTORP42345 2549 aa12.14□□□□□ -0.47
PTCH1-226ENST00000553011 ZNF593O00488 134 aaPredicted RBP12.13□□□□□ -0.47
PTCH1-226ENST00000553011 GLCEO94923 617 aa12.13□□□□□ -0.47
PTCH1-226ENST00000553011 ABHD16AO95870 558 aa12.13□□□□□ -0.47
PTCH1-226ENST00000553011 SPARCP09486 303 aa12.13□□□□□ -0.47
PTCH1-226ENST00000553011 RAD52P43351 418 aa12.13□□□□□ -0.47
PTCH1-226ENST00000553011 KLHL12Q53G59 568 aa12.13□□□□□ -0.47
PTCH1-226ENST00000553011 SPATA46Q5T0L3 261 aa12.13□□□□□ -0.47
PTCH1-226ENST00000553011 SPNS3Q6ZMD2 512 aa12.13□□□□□ -0.47
PTCH1-226ENST00000553011 OR10S1Q8NGN2 331 aa12.13□□□□□ -0.47
PTCH1-226ENST00000553011 OR1J1Q8NGS3 322 aa12.13□□□□□ -0.47
PTCH1-226ENST00000553011 ABHD4Q8TB40 342 aa12.13□□□□□ -0.47
PTCH1-226ENST00000553011 ZMYND19Q96E35 227 aaPredicted RBP12.13□□□□□ -0.47
PTCH1-226ENST00000553011 C4orf45Q96LM5 186 aa12.13□□□□□ -0.47
PTCH1-226ENST00000553011 PITX2Q99697 317 aa12.13□□□□□ -0.47
PTCH1-226ENST00000553011 DOK1Q99704 481 aa12.13□□□□□ -0.47
PTCH1-226ENST00000553011 SLC29A1Q99808 456 aa12.13□□□□□ -0.47
PTCH1-226ENST00000553011 BCL2L14Q9BZR8 327 aa12.13□□□□□ -0.47
PTCH1-226ENST00000553011 HDHD2Q9H0R4 259 aa12.13□□□□□ -0.47
PTCH1-226ENST00000553011 PNRC2Q9NPJ4 139 aaKnown RBP12.13□□□□□ -0.47
PTCH1-226ENST00000553011 USE1Q9NZ43 259 aa12.13□□□□□ -0.47
PTCH1-226ENST00000553011 DUSP13Q9UII6 198 aa12.13□□□□□ -0.47
PTCH1-226ENST00000553011 GRIP1Q9Y3R0 1128 aa12.13□□□□□ -0.47
PTCH1-226ENST00000553011 PMF1-BGLAPU3KQ54 211 aa12.13□□□□□ -0.47
PTCH1-226ENST00000553011 H7C417 338 aa12.12□□□□□ -0.47
PTCH1-226ENST00000553011 CLPTM1O96005 669 aa12.12□□□□□ -0.47
PTCH1-226ENST00000553011 SLC2A5P22732 501 aa12.12□□□□□ -0.47
PTCH1-226ENST00000553011 GSTT1P30711 240 aa12.12□□□□□ -0.47
PTCH1-226ENST00000553011 ALDH3A2P51648 485 aa12.12□□□□□ -0.47
PTCH1-226ENST00000553011 BLVRAP53004 296 aa12.12□□□□□ -0.47
PTCH1-226ENST00000553011 RPS7P62081 194 aaKnown RBP12.12□□□□□ -0.47
PTCH1-226ENST00000553011 PPP1CBP62140 327 aa12.12□□□□□ -0.47
PTCH1-226ENST00000553011 MAD2L1BPQ15013 274 aaPredicted RBP12.12□□□□□ -0.47
PTCH1-226ENST00000553011 PCK2Q16822 640 aa12.12□□□□□ -0.47
PTCH1-226ENST00000553011 RSPO1Q2MKA7 263 aaPredicted RBP12.12□□□□□ -0.47
PTCH1-226ENST00000553011 ZIK1Q3SY52 487 aaPredicted RBP12.12□□□□□ -0.47
PTCH1-226ENST00000553011 SHEQ5VZ18 495 aa12.12□□□□□ -0.47
PTCH1-226ENST00000553011 DCXRQ7Z4W1 244 aa12.12□□□□□ -0.47
PTCH1-226ENST00000553011 BCDIN3DQ7Z5W3 292 aaKnown RBP12.12□□□□□ -0.47
PTCH1-226ENST00000553011 ERI1Q8IV48 349 aaKnown RBP12.12□□□□□ -0.47
PTCH1-226ENST00000553011 TCEANCQ8N8B7 351 aa12.12□□□□□ -0.47
PTCH1-226ENST00000553011 OR6N2Q8NGY6 317 aa12.12□□□□□ -0.47
PTCH1-226ENST00000553011 SLC25A40Q8TBP6 338 aa12.12□□□□□ -0.47
PTCH1-226ENST00000553011 INTS14Q96SY0 518 aa12.12□□□□□ -0.47
PTCH1-226ENST00000553011 COQ7Q99807 217 aa12.12□□□□□ -0.47
PTCH1-226ENST00000553011 C9orf16Q9BUW7 83 aa12.12□□□□□ -0.47
PTCH1-226ENST00000553011 PRRG3Q9BZD7 231 aa12.12□□□□□ -0.47
PTCH1-226ENST00000553011 MARCH7Q9H992 704 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms