RNA–Protein interactions for RNA: ENST00000552960.5

HDAC7-230, Transcript of histone deacetylase 7, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene HDAC7, Length 3,216 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-230ENST00000552960 ALOX5APP20292 161 aa11.13□□□□□ -0.63
HDAC7-230ENST00000552960 HOXA1P49639 335 aaPredicted RBP11.13□□□□□ -0.63
HDAC7-230ENST00000552960 MEOX2P50222 304 aa11.13□□□□□ -0.63
HDAC7-230ENST00000552960 PPP1R1AQ13522 171 aa11.13□□□□□ -0.63
HDAC7-230ENST00000552960 FAM209BQ5JX69 171 aa11.13□□□□□ -0.63
HDAC7-230ENST00000552960 LINC00114Q6XXX2 140 aa11.13□□□□□ -0.63
HDAC7-230ENST00000552960 GPX8Q8TED1 209 aa11.13□□□□□ -0.63
HDAC7-230ENST00000552960 SLC25A44Q96H78 314 aaPredicted RBP11.13□□□□□ -0.63
HDAC7-230ENST00000552960 PIGMQ9H3S5 423 aa11.13□□□□□ -0.63
HDAC7-230ENST00000552960 BARX1Q9HBU1 254 aaPredicted RBP11.13□□□□□ -0.63
HDAC7-230ENST00000552960 TNFSF18Q9UNG2 199 aa11.13□□□□□ -0.63
HDAC7-230ENST00000552960 TMED7Q9Y3B3 224 aa11.13□□□□□ -0.63
HDAC7-230ENST00000552960 IGKV1D-42A0A075B6H8 117 aa11.12□□□□□ -0.63
HDAC7-230ENST00000552960 A0A1W2PPC4 97 aa11.12□□□□□ -0.63
HDAC7-230ENST00000552960 C10orf142B7Z368 130 aa11.12□□□□□ -0.63
HDAC7-230ENST00000552960 HTR2CP28335 458 aa11.12□□□□□ -0.63
HDAC7-230ENST00000552960 RAB13P51153 203 aa11.12□□□□□ -0.63
HDAC7-230ENST00000552960 MESTQ5EB52 335 aa11.12□□□□□ -0.63
HDAC7-230ENST00000552960 ACOT7LQ6ZUV0 252 aa11.12□□□□□ -0.63
HDAC7-230ENST00000552960 MARCH3Q86UD3 253 aa11.12□□□□□ -0.63
HDAC7-230ENST00000552960 CDC20BQ86Y33 519 aa11.12□□□□□ -0.63
HDAC7-230ENST00000552960 PRSS58Q8IYP2 241 aa11.12□□□□□ -0.63
HDAC7-230ENST00000552960 PRR22Q8IZ63 422 aa11.12□□□□□ -0.63
HDAC7-230ENST00000552960 ARMC10Q8N2F6 343 aa11.12□□□□□ -0.63
HDAC7-230ENST00000552960 DCUN1D4Q92564 292 aa11.12□□□□□ -0.63
HDAC7-230ENST00000552960 C4orf45Q96LM5 186 aa11.12□□□□□ -0.63
HDAC7-230ENST00000552960 LRFN5Q96NI6 719 aa11.12□□□□□ -0.63
HDAC7-230ENST00000552960 KLHDC3Q9BQ90 382 aa11.12□□□□□ -0.63
HDAC7-230ENST00000552960 LRRC61Q9BV99 259 aa11.12□□□□□ -0.63
HDAC7-230ENST00000552960 CST11Q9H112 138 aa11.12□□□□□ -0.63
HDAC7-230ENST00000552960 LYRM4Q9HD34 91 aa11.12□□□□□ -0.63
HDAC7-230ENST00000552960 RNF222A6NCQ9 220 aa11.12□□□□□ -0.63
HDAC7-230ENST00000552960 EIF4E2O60573 245 aaKnown RBP11.12□□□□□ -0.63
HDAC7-230ENST00000552960 PNPP00491 289 aa11.12□□□□□ -0.63
HDAC7-230ENST00000552960 TNFP01375 233 aa11.12□□□□□ -0.63
HDAC7-230ENST00000552960 APOC1P02654 83 aa11.12□□□□□ -0.63
HDAC7-230ENST00000552960 MAOAP21397 527 aa11.12□□□□□ -0.63
HDAC7-230ENST00000552960 CASRP41180 1078 aa11.12□□□□□ -0.63
HDAC7-230ENST00000552960 DNASE1L1P49184 302 aa11.12□□□□□ -0.63
HDAC7-230ENST00000552960 RASGEF1BQ0VAM2 473 aa11.12□□□□□ -0.63
HDAC7-230ENST00000552960 KIR2DS3Q14952 304 aa11.12□□□□□ -0.63
HDAC7-230ENST00000552960 ZNF74Q16587 644 aa11.12□□□□□ -0.63
HDAC7-230ENST00000552960 RNASE10Q5GAN6 216 aaKnown RBP11.12□□□□□ -0.63
HDAC7-230ENST00000552960 C1QL3Q5VWW1 255 aa11.12□□□□□ -0.63
HDAC7-230ENST00000552960 RAB11FIP2Q7L804 512 aa11.12□□□□□ -0.63
HDAC7-230ENST00000552960 TSPAN32Q96QS1 320 aa11.12□□□□□ -0.63
HDAC7-230ENST00000552960 SELENOIQ9C0D9 397 aa11.12□□□□□ -0.63
HDAC7-230ENST00000552960 TLNRD1Q9H1K6 362 aa11.12□□□□□ -0.63
HDAC7-230ENST00000552960 HRH4Q9H3N8 390 aa11.12□□□□□ -0.63
HDAC7-230ENST00000552960 B9D1Q9UPM9 204 aa11.12□□□□□ -0.63
HDAC7-230ENST00000552960 FAM96BQ9Y3D0 163 aa11.12□□□□□ -0.63
HDAC7-230ENST00000552960 BDP1A6H8Y1 2624 aa11.11□□□□□ -0.63
HDAC7-230ENST00000552960 MPTX1A8MV57 137 aa11.11□□□□□ -0.63
HDAC7-230ENST00000552960 SULT1C2O00338 296 aa11.11□□□□□ -0.63
HDAC7-230ENST00000552960 SLC17A2O00624 439 aa11.11□□□□□ -0.63
HDAC7-230ENST00000552960 OR2F2O95006 317 aa11.11□□□□□ -0.63
HDAC7-230ENST00000552960 CD2P06729 351 aa11.11□□□□□ -0.63
HDAC7-230ENST00000552960 HOXC4P09017 264 aaPredicted RBP11.11□□□□□ -0.63
HDAC7-230ENST00000552960 SLC35E2P0CK97 266 aa11.11□□□□□ -0.63
HDAC7-230ENST00000552960 SPP1P10451 314 aa11.11□□□□□ -0.63
HDAC7-230ENST00000552960 BCKDHBP21953 392 aa11.11□□□□□ -0.63
HDAC7-230ENST00000552960 NFYBP25208 207 aa11.11□□□□□ -0.63
HDAC7-230ENST00000552960 AIMP2Q13155 320 aaKnown RBP11.11□□□□□ -0.63
HDAC7-230ENST00000552960 OR2F1Q13607 317 aa11.11□□□□□ -0.63
HDAC7-230ENST00000552960 CD226Q15762 336 aa11.11□□□□□ -0.63
HDAC7-230ENST00000552960 PLEKHN1Q494U1 663 aaPredicted RBP11.11□□□□□ -0.63
HDAC7-230ENST00000552960 FOXRED2Q8IWF2 684 aa11.11□□□□□ -0.63
HDAC7-230ENST00000552960 BCORP1Q8N888 145 aa11.11□□□□□ -0.63
HDAC7-230ENST00000552960 C16orf52Q8NHV5 167 aa11.11□□□□□ -0.63
HDAC7-230ENST00000552960 FAM174AQ8TBP5 190 aa11.11□□□□□ -0.63
HDAC7-230ENST00000552960 GPBAR1Q8TDU6 330 aa11.11□□□□□ -0.63
HDAC7-230ENST00000552960 CTHRC1Q96CG8 243 aa11.11□□□□□ -0.63
HDAC7-230ENST00000552960 FBXO17Q96EF6 278 aa11.11□□□□□ -0.63
HDAC7-230ENST00000552960 SLC25A21Q9BQT8 299 aaPredicted RBP11.11□□□□□ -0.63
HDAC7-230ENST00000552960 PCOLCE2Q9UKZ9 415 aa11.11□□□□□ -0.63
HDAC7-230ENST00000552960 VSIG4Q9Y279 399 aa11.11□□□□□ -0.63
HDAC7-230ENST00000552960 EP300Q09472 2414 aaPredicted RBP11.11□□□□□ -0.63
HDAC7-230ENST00000552960 ZNF208O43345 1280 aa11.11□□□□□ -0.63
HDAC7-230ENST00000552960 SLC16A7O60669 478 aa11.11□□□□□ -0.63
HDAC7-230ENST00000552960 ACTL6AO96019 429 aa11.11□□□□□ -0.63
HDAC7-230ENST00000552960 RABIFP47224 123 aa11.11□□□□□ -0.63
HDAC7-230ENST00000552960 NUDCD2Q8WVJ2 157 aa11.11□□□□□ -0.63
HDAC7-230ENST00000552960 FAM60AQ9NP50 221 aa11.11□□□□□ -0.63
HDAC7-230ENST00000552960 BIN3Q9NQY0 253 aa11.11□□□□□ -0.63
HDAC7-230ENST00000552960 CTSFQ9UBX1 484 aa11.11□□□□□ -0.63
HDAC7-230ENST00000552960 ZNF629Q9UEG4 869 aaPredicted RBP11.11□□□□□ -0.63
HDAC7-230ENST00000552960 NDRG3Q9UGV2 375 aa11.11□□□□□ -0.63
HDAC7-230ENST00000552960 HS3ST3A1Q9Y663 406 aa11.11□□□□□ -0.63
HDAC7-230ENST00000552960 MRPS18BQ9Y676 258 aaKnown RBP11.11□□□□□ -0.63
HDAC7-230ENST00000552960 TRBV5-7A0A0A0MS05 114 aa11.11□□□□□ -0.63
HDAC7-230ENST00000552960 CPED1A4D0V7 1026 aa11.11□□□□□ -0.63
HDAC7-230ENST00000552960 EFCAB7A8K855 629 aa11.11□□□□□ -0.63
HDAC7-230ENST00000552960 EIF1AYO14602 144 aaKnown RBP11.11□□□□□ -0.63
HDAC7-230ENST00000552960 ZNF432O94892 652 aa11.11□□□□□ -0.63
HDAC7-230ENST00000552960 ADCYAP1P18509 176 aa11.11□□□□□ -0.63
HDAC7-230ENST00000552960 PMPCAQ10713 525 aa11.11□□□□□ -0.63
HDAC7-230ENST00000552960 RBM39Q14498 530 aaKnown RBP11.11□□□□□ -0.63
HDAC7-230ENST00000552960 PAPD4Q6PIY7 484 aaKnown RBP11.11□□□□□ -0.63
HDAC7-230ENST00000552960 ZNF595Q8IYB9 648 aa11.11□□□□□ -0.63
HDAC7-230ENST00000552960 METTL21AQ8WXB1 218 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms