RNA–Protein interactions for RNA: ENST00000552823.5

LIMA1-215, Transcript of LIM domain and actin binding 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LIMA1, Length 3,254 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-215ENST00000552823 PLPP5Q8NEB5 264 aa4.99□□□□□ -1.61
LIMA1-215ENST00000552823 OR1J4Q8NGS1 313 aa4.99□□□□□ -1.61
LIMA1-215ENST00000552823 PIGTQ969N2 578 aa4.99□□□□□ -1.61
LIMA1-215ENST00000552823 DDIT4LQ96D03 193 aa4.99□□□□□ -1.61
LIMA1-215ENST00000552823 ZNF385AQ96PM9 386 aaKnown RBP4.99□□□□□ -1.61
LIMA1-215ENST00000552823 SLC6A7Q99884 636 aa4.99□□□□□ -1.61
LIMA1-215ENST00000552823 SOSTQ9BQB4 213 aa4.99□□□□□ -1.61
LIMA1-215ENST00000552823 JAM3Q9BX67 310 aa4.99□□□□□ -1.61
LIMA1-215ENST00000552823 OR2B2Q9GZK3 357 aa4.99□□□□□ -1.61
LIMA1-215ENST00000552823 C20orf85Q9H1P6 137 aa4.99□□□□□ -1.61
LIMA1-215ENST00000552823 PLEKHA1Q9HB21 404 aa4.99□□□□□ -1.61
LIMA1-215ENST00000552823 CHST11Q9NPF2 352 aa4.99□□□□□ -1.61
LIMA1-215ENST00000552823 SLC23A1Q9UHI7 598 aa4.99□□□□□ -1.61
LIMA1-215ENST00000552823 MOKQ9UQ07 419 aa4.99□□□□□ -1.61
LIMA1-215ENST00000552823 TMEM200CA6NKL6 621 aa4.99□□□□□ -1.61
LIMA1-215ENST00000552823 FAM166BA8MTA8 275 aa4.99□□□□□ -1.61
LIMA1-215ENST00000552823 ADAM10O14672 748 aa4.99□□□□□ -1.61
LIMA1-215ENST00000552823 ZNF20P17024 532 aa4.99□□□□□ -1.61
LIMA1-215ENST00000552823 PSMB1P20618 241 aaKnown RBP4.99□□□□□ -1.61
LIMA1-215ENST00000552823 PRSS3P35030 304 aa4.99□□□□□ -1.61
LIMA1-215ENST00000552823 BTCP35070 178 aa4.99□□□□□ -1.61
LIMA1-215ENST00000552823 CDK10Q15131 360 aa4.99□□□□□ -1.61
LIMA1-215ENST00000552823 C3AR1Q16581 482 aa4.99□□□□□ -1.61
LIMA1-215ENST00000552823 CDNFQ49AH0 187 aa4.99□□□□□ -1.61
LIMA1-215ENST00000552823 PLA1AQ53H76 456 aa4.99□□□□□ -1.61
LIMA1-215ENST00000552823 NKAPLQ5M9Q1 402 aa4.99□□□□□ -1.61
LIMA1-215ENST00000552823 WIPI1Q5MNZ9 446 aaPredicted RBP4.99□□□□□ -1.61
LIMA1-215ENST00000552823 OLFML2AQ68BL7 652 aa4.99□□□□□ -1.61
LIMA1-215ENST00000552823 PMS2CLQ68D20 193 aa4.99□□□□□ -1.61
LIMA1-215ENST00000552823 SPINK14Q6IE38 97 aa4.99□□□□□ -1.61
LIMA1-215ENST00000552823 DHRS13Q6UX07 377 aa4.99□□□□□ -1.61
LIMA1-215ENST00000552823 RHOUQ7L0Q8 258 aa4.99□□□□□ -1.61
LIMA1-215ENST00000552823 FAM71CQ8NEG0 241 aa4.99□□□□□ -1.61
LIMA1-215ENST00000552823 OR2AE1Q8NHA4 323 aa4.99□□□□□ -1.61
LIMA1-215ENST00000552823 ADAMTS14Q8WXS8 1223 aa4.99□□□□□ -1.61
LIMA1-215ENST00000552823 MIB2Q96AX9 1013 aa4.99□□□□□ -1.61
LIMA1-215ENST00000552823 RADILQ96JH8 1075 aa4.99□□□□□ -1.61
LIMA1-215ENST00000552823 MARVELD1Q9BSK0 173 aa4.99□□□□□ -1.61
LIMA1-215ENST00000552823 DUSP23Q9BVJ7 150 aa4.99□□□□□ -1.61
LIMA1-215ENST00000552823 HES7Q9BYE0 225 aa4.99□□□□□ -1.61
LIMA1-215ENST00000552823 SLC19A3Q9BZV2 496 aa4.99□□□□□ -1.61
LIMA1-215ENST00000552823 HHLA2Q9UM44 414 aa4.99□□□□□ -1.61
LIMA1-215ENST00000552823 PCDHGA5Q9Y5G8 931 aa4.99□□□□□ -1.61
LIMA1-215ENST00000552823 ATRXP46100 2492 aa4.99□□□□□ -1.61
LIMA1-215ENST00000552823 LAMA5O15230 3695 aa4.98□□□□□ -1.61
LIMA1-215ENST00000552823 IGLV1-36A0A0B4J1U3 117 aa4.98□□□□□ -1.61
LIMA1-215ENST00000552823 LY6G6EA0A0G2JKS1 128 aa4.98□□□□□ -1.61
LIMA1-215ENST00000552823 FAM221AA4D161 298 aa4.98□□□□□ -1.61
LIMA1-215ENST00000552823 ARPC5O15511 151 aa4.98□□□□□ -1.61
LIMA1-215ENST00000552823 SCO1O75880 301 aa4.98□□□□□ -1.61
LIMA1-215ENST00000552823 RGS11O94810 467 aa4.98□□□□□ -1.61
LIMA1-215ENST00000552823 HTR3BO95264 441 aa4.98□□□□□ -1.61
LIMA1-215ENST00000552823 ABHD16AO95870 558 aa4.98□□□□□ -1.61
LIMA1-215ENST00000552823 GNB3P16520 340 aa4.98□□□□□ -1.61
LIMA1-215ENST00000552823 HTR2CP28335 458 aa4.98□□□□□ -1.61
LIMA1-215ENST00000552823 CRABP1P29762 137 aa4.98□□□□□ -1.61
LIMA1-215ENST00000552823 GZMKP49863 264 aa4.98□□□□□ -1.61
LIMA1-215ENST00000552823 ATP1A1-AS1Q5TC04 95 aa4.98□□□□□ -1.61
LIMA1-215ENST00000552823 AWAT2Q6E213 333 aa4.98□□□□□ -1.61
LIMA1-215ENST00000552823 WDR74Q6RFH5 385 aaPredicted RBP4.98□□□□□ -1.61
LIMA1-215ENST00000552823 CFAP77Q6ZQR2 320 aa4.98□□□□□ -1.61
LIMA1-215ENST00000552823 RABEPKQ7Z6M1 372 aa4.98□□□□□ -1.61
LIMA1-215ENST00000552823 BIVMQ86UB2 503 aa4.98□□□□□ -1.61
LIMA1-215ENST00000552823 BPHLQ86WA6 291 aaPredicted RBP4.98□□□□□ -1.61
LIMA1-215ENST00000552823 C20orf196Q8IYI0 205 aa4.98□□□□□ -1.61
LIMA1-215ENST00000552823 EXD3Q8N9H8 876 aa4.98□□□□□ -1.61
LIMA1-215ENST00000552823 NFAM1Q8NET5 270 aaPredicted RBP4.98□□□□□ -1.61
LIMA1-215ENST00000552823 OR4D6Q8NGJ1 314 aa4.98□□□□□ -1.61
LIMA1-215ENST00000552823 OR4C16Q8NGL9 310 aa4.98□□□□□ -1.61
LIMA1-215ENST00000552823 OR52N5Q8NH56 324 aa4.98□□□□□ -1.61
LIMA1-215ENST00000552823 POC1BQ8TC44 478 aa4.98□□□□□ -1.61
LIMA1-215ENST00000552823 SLC22A8Q8TCC7 542 aa4.98□□□□□ -1.61
LIMA1-215ENST00000552823 ASB5Q8WWX0 329 aa4.98□□□□□ -1.61
LIMA1-215ENST00000552823 HOXB13Q92826 284 aaPredicted RBP4.98□□□□□ -1.61
LIMA1-215ENST00000552823 RNF166Q96A37 237 aaPredicted RBP4.98□□□□□ -1.61
LIMA1-215ENST00000552823 SPACA9Q96E40 222 aaPredicted RBP4.98□□□□□ -1.61
LIMA1-215ENST00000552823 ADAT3Q96EY9 351 aaPredicted RBP4.98□□□□□ -1.61
LIMA1-215ENST00000552823 PGAM5Q96HS1 289 aa4.98□□□□□ -1.61
LIMA1-215ENST00000552823 ALKBH3Q96Q83 286 aaPredicted RBP4.98□□□□□ -1.61
LIMA1-215ENST00000552823 GPR84Q9NQS5 396 aa4.98□□□□□ -1.61
LIMA1-215ENST00000552823 CA10Q9NS85 328 aa4.98□□□□□ -1.61
LIMA1-215ENST00000552823 C19orf25Q9UFG5 118 aaPredicted RBP4.98□□□□□ -1.61
LIMA1-215ENST00000552823 PILRBQ9UKJ0 227 aa4.98□□□□□ -1.61
LIMA1-215ENST00000552823 PLEKHA6Q9Y2H5 1048 aa4.98□□□□□ -1.61
LIMA1-215ENST00000552823 WIF1Q9Y5W5 379 aa4.98□□□□□ -1.61
LIMA1-215ENST00000552823 U3KQA8 63 aa4.98□□□□□ -1.61
LIMA1-215ENST00000552823 TMEM131Q92545 1883 aa4.98□□□□□ -1.61
LIMA1-215ENST00000552823 TNFSF12-TNFSF13A0A0A6YY99 330 aa4.98□□□□□ -1.61
LIMA1-215ENST00000552823 TRAV1-2A0A0B4J238 106 aa4.98□□□□□ -1.61
LIMA1-215ENST00000552823 TMEM272A0A1B0GTI8 110 aa4.98□□□□□ -1.61
LIMA1-215ENST00000552823 C13orf42A0A1B0GVH6 325 aa4.98□□□□□ -1.61
LIMA1-215ENST00000552823 A0A1W2PQ72 361 aa4.98□□□□□ -1.61
LIMA1-215ENST00000552823 TMEM212A6NML5 194 aa4.98□□□□□ -1.61
LIMA1-215ENST00000552823 NPIPA2E9PIF3 369 aa4.98□□□□□ -1.61
LIMA1-215ENST00000552823 NPIPA3F8WFD2 350 aa4.98□□□□□ -1.61
LIMA1-215ENST00000552823 GOSR2O14653 212 aa4.98□□□□□ -1.61
LIMA1-215ENST00000552823 CXCL13O43927 109 aa4.98□□□□□ -1.61
LIMA1-215ENST00000552823 SC5DO75845 299 aa4.98□□□□□ -1.61
LIMA1-215ENST00000552823 GUSBP08236 651 aa4.98□□□□□ -1.61
LIMA1-215ENST00000552823 CCL2P13500 99 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms