RNA–Protein interactions for RNA: ENST00000549414.6

CUX1-213, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CUX1, Length 4,452 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-213ENST00000549414 STMND1H3BQB6 276 aa14.71□□□□□ -0.05
CUX1-213ENST00000549414 TNFSF15O95150 251 aa14.71□□□□□ -0.05
CUX1-213ENST00000549414 GABRB1P18505 474 aa14.71□□□□□ -0.05
CUX1-213ENST00000549414 CD53P19397 219 aa14.71□□□□□ -0.05
CUX1-213ENST00000549414 NPY4RP50391 375 aa14.71□□□□□ -0.05
CUX1-213ENST00000549414 UBE2IP63279 158 aaKnown RBP14.71□□□□□ -0.05
CUX1-213ENST00000549414 RHOUQ7L0Q8 258 aa14.71□□□□□ -0.05
CUX1-213ENST00000549414 OR9K2Q8NGE7 335 aa14.71□□□□□ -0.05
CUX1-213ENST00000549414 SLC25A43Q8WUT9 341 aaPredicted RBP14.71□□□□□ -0.05
CUX1-213ENST00000549414 LRFN5Q96NI6 719 aa14.71□□□□□ -0.05
CUX1-213ENST00000549414 GPR84Q9NQS5 396 aa14.71□□□□□ -0.05
CUX1-213ENST00000549414 MPLP40238 635 aa14.71□□□□□ -0.05
CUX1-213ENST00000549414 RAD52P43351 418 aa14.71□□□□□ -0.05
CUX1-213ENST00000549414 ATP1B3P54709 279 aa14.71□□□□□ -0.05
CUX1-213ENST00000549414 EXT1Q16394 746 aa14.71□□□□□ -0.05
CUX1-213ENST00000549414 LAIR2Q6ISS4 152 aa14.71□□□□□ -0.05
CUX1-213ENST00000549414 SLC22A18ASQ8N1D0 253 aa14.71□□□□□ -0.05
CUX1-213ENST00000549414 TEX19Q8NA77 164 aa14.71□□□□□ -0.05
CUX1-213ENST00000549414 CADM4Q8NFZ8 388 aa14.71□□□□□ -0.05
CUX1-213ENST00000549414 FNDC9Q8TBE3 224 aa14.71□□□□□ -0.05
CUX1-213ENST00000549414 FER1L6-AS2Q96M78 137 aa14.71□□□□□ -0.05
CUX1-213ENST00000549414 PTDSS2Q9BVG9 487 aa14.71□□□□□ -0.05
CUX1-213ENST00000549414 PCOLCE2Q9UKZ9 415 aa14.71□□□□□ -0.05
CUX1-213ENST00000549414 RAF1P04049 648 aa14.71□□□□□ -0.06
CUX1-213ENST00000549414 CTSBP07858 339 aa14.71□□□□□ -0.06
CUX1-213ENST00000549414 PTBP1P26599 531 aaKnown RBP eCLIP14.71□□□□□ -0.064e-11■■■■■ 42.8
CUX1-213ENST00000549414 BARHL1Q9BZE3 327 aa14.71□□□□□ -0.06
CUX1-213ENST00000549414 DNTTIP1Q9H147 329 aa14.71□□□□□ -0.06
CUX1-213ENST00000549414 NIPAL2Q9H841 368 aa14.71□□□□□ -0.06
CUX1-213ENST00000549414 PIGLQ9Y2B2 252 aa14.71□□□□□ -0.06
CUX1-213ENST00000549414 TMEM184BQ9Y519 407 aaPredicted RBP14.71□□□□□ -0.06
CUX1-213ENST00000549414 CACNA1BQ00975 2339 aa14.71□□□□□ -0.06
CUX1-213ENST00000549414 ABHD16AO95870 558 aa14.7□□□□□ -0.06
CUX1-213ENST00000549414 EDN3P14138 238 aa14.7□□□□□ -0.06
CUX1-213ENST00000549414 ACHEP22303 614 aa14.7□□□□□ -0.06
CUX1-213ENST00000549414 NFYAP23511 347 aaPredicted RBP14.7□□□□□ -0.06
CUX1-213ENST00000549414 GPR3P46089 330 aa14.7□□□□□ -0.06
CUX1-213ENST00000549414 CYCSP99999 105 aaKnown RBP14.7□□□□□ -0.06
CUX1-213ENST00000549414 IFITM3Q01628 133 aa14.7□□□□□ -0.06
CUX1-213ENST00000549414 GUCA2AQ02747 115 aa14.7□□□□□ -0.06
CUX1-213ENST00000549414 FUT5Q11128 374 aa14.7□□□□□ -0.06
CUX1-213ENST00000549414 JAM3Q9BX67 310 aa14.7□□□□□ -0.06
CUX1-213ENST00000549414 S1PR5Q9H228 398 aa14.7□□□□□ -0.06
CUX1-213ENST00000549414 CYSLTR2Q9NS75 346 aa14.7□□□□□ -0.06
CUX1-213ENST00000549414 OR6C76A6NM76 312 aa14.7□□□□□ -0.06
CUX1-213ENST00000549414 C4orf47A7E2U8 309 aa14.7□□□□□ -0.06
CUX1-213ENST00000549414 ARPC3O15145 178 aa14.7□□□□□ -0.06
CUX1-213ENST00000549414 BET1O15155 118 aa14.7□□□□□ -0.06
CUX1-213ENST00000549414 CXCL13O43927 109 aa14.7□□□□□ -0.06
CUX1-213ENST00000549414 TAS2R31P59538 309 aa14.7□□□□□ -0.06
CUX1-213ENST00000549414 TMEM185AQ8NFB2 350 aa14.7□□□□□ -0.06
CUX1-213ENST00000549414 GNRHR2Q96P88 292 aa14.7□□□□□ -0.06
CUX1-213ENST00000549414 ZNF436Q9C0F3 470 aaPredicted RBP14.7□□□□□ -0.06
CUX1-213ENST00000549414 EIF5A2Q9GZV4 153 aaKnown RBP14.7□□□□□ -0.06
CUX1-213ENST00000549414 HRASLSQ9HDD0 168 aa14.7□□□□□ -0.06
CUX1-213ENST00000549414 TNFSF14O43557 240 aa14.7□□□□□ -0.06
CUX1-213ENST00000549414 ERGP11308 486 aa14.7□□□□□ -0.06
CUX1-213ENST00000549414 ADH6P28332 368 aa14.7□□□□□ -0.06
CUX1-213ENST00000549414 ZNF136P52737 540 aa14.7□□□□□ -0.06
CUX1-213ENST00000549414 PCBD1P61457 104 aa14.7□□□□□ -0.06
CUX1-213ENST00000549414 ARSJQ5FYB0 599 aaPredicted RBP14.7□□□□□ -0.06
CUX1-213ENST00000549414 MKXQ8IYA7 352 aa14.7□□□□□ -0.06
CUX1-213ENST00000549414 MAML2Q8IZL2 1156 aaPredicted RBP14.7□□□□□ -0.06
CUX1-213ENST00000549414 TRMT61AQ96FX7 289 aaKnown RBP14.7□□□□□ -0.06
CUX1-213ENST00000549414 METTL9Q9H1A3 318 aa14.7□□□□□ -0.06
CUX1-213ENST00000549414 LUZP4Q9P127 313 aa14.7□□□□□ -0.06
CUX1-213ENST00000549414 B3GALT5Q9Y2C3 310 aa14.7□□□□□ -0.06
CUX1-213ENST00000549414 ZNF175Q9Y473 711 aa14.7□□□□□ -0.06
CUX1-213ENST00000549414 PCDHGA5Q9Y5G8 931 aa14.7□□□□□ -0.06
CUX1-213ENST00000549414 ARHGEF17Q96PE2 2063 aaPredicted RBP14.7□□□□□ -0.06
CUX1-213ENST00000549414 TNFSF12-TNFSF13A0A0A6YY99 330 aa14.7□□□□□ -0.06
CUX1-213ENST00000549414 IGHV3-64DA0A0J9YX35 117 aa14.7□□□□□ -0.06
CUX1-213ENST00000549414 GPR171O14626 319 aa14.7□□□□□ -0.06
CUX1-213ENST00000549414 TNFSF12O43508 249 aa14.7□□□□□ -0.06
CUX1-213ENST00000549414 CD3DP04234 171 aa14.7□□□□□ -0.06
CUX1-213ENST00000549414 RRADP55042 308 aa14.7□□□□□ -0.06
CUX1-213ENST00000549414 BTG1P62324 171 aa14.7□□□□□ -0.06
CUX1-213ENST00000549414 HAGHLQ6PII5 290 aaPredicted RBP14.7□□□□□ -0.06
CUX1-213ENST00000549414 MAMSTRQ6ZN01 415 aa14.7□□□□□ -0.06
CUX1-213ENST00000549414 NANOS1Q8WY41 292 aaKnown RBP14.7□□□□□ -0.06
CUX1-213ENST00000549414 C12orf49Q9H741 205 aa14.7□□□□□ -0.06
CUX1-213ENST00000549414 RAB22AQ9UL26 194 aa14.7□□□□□ -0.06
CUX1-213ENST00000549414 LOXL2Q9Y4K0 774 aa14.7□□□□□ -0.06
CUX1-213ENST00000549414 SBF1O95248 1867 aa14.7□□□□□ -0.06
CUX1-213ENST00000549414 ANKRD30BLA7E2S9 258 aa14.69□□□□□ -0.06
CUX1-213ENST00000549414 RRP8O43159 456 aaKnown RBP14.69□□□□□ -0.06
CUX1-213ENST00000549414 SULT1B1O43704 296 aa14.69□□□□□ -0.06
CUX1-213ENST00000549414 LAP3P28838 519 aa14.69□□□□□ -0.06
CUX1-213ENST00000549414 DOC2BQ14184 412 aa14.69□□□□□ -0.06
CUX1-213ENST00000549414 EBPQ15125 230 aaKnown RBP14.69□□□□□ -0.06
CUX1-213ENST00000549414 ETFDHQ16134 617 aa14.69□□□□□ -0.06
CUX1-213ENST00000549414 KMT5CQ86Y97 462 aa14.69□□□□□ -0.06
CUX1-213ENST00000549414 C17orf50Q8WW18 174 aa14.69□□□□□ -0.06
CUX1-213ENST00000549414 MAFIPQ8WZ33 124 aa14.69□□□□□ -0.06
CUX1-213ENST00000549414 EMC3Q9P0I2 261 aa14.69□□□□□ -0.06
CUX1-213ENST00000549414 BHLHE40O14503 412 aa14.69□□□□□ -0.06
CUX1-213ENST00000549414 PLPP2O43688 288 aa14.69□□□□□ -0.06
CUX1-213ENST00000549414 STK17BO94768 372 aa14.69□□□□□ -0.06
CUX1-213ENST00000549414 EGR3Q06889 387 aa14.69□□□□□ -0.06
CUX1-213ENST00000549414 NKAIN3Q8N8D7 197 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms