RNA–Protein interactions for RNA: ENST00000549162.5

SCAF11-212, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 1 (best) BASIC

Gene SCAF11, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-212ENST00000549162 ZNF3P17036 446 aa4.26□□□□□ -1.73
SCAF11-212ENST00000549162 MAOAP21397 527 aa4.26□□□□□ -1.73
SCAF11-212ENST00000549162 CASRP41180 1078 aa4.26□□□□□ -1.73
SCAF11-212ENST00000549162 PUDPQ08623 228 aa4.26□□□□□ -1.73
SCAF11-212ENST00000549162 TIMM23BQ5SRD1 257 aa4.26□□□□□ -1.73
SCAF11-212ENST00000549162 RNF175Q8N4F7 328 aa4.26□□□□□ -1.73
SCAF11-212ENST00000549162 LRTM2Q8N967 370 aa4.26□□□□□ -1.73
SCAF11-212ENST00000549162 OR4F15Q8NGB8 312 aa4.26□□□□□ -1.73
SCAF11-212ENST00000549162 OR10S1Q8NGN2 331 aa4.26□□□□□ -1.73
SCAF11-212ENST00000549162 FANK1Q8TC84 345 aa4.26□□□□□ -1.73
SCAF11-212ENST00000549162 CPNE2Q96FN4 548 aaPredicted RBP4.26□□□□□ -1.73
SCAF11-212ENST00000549162 OTUB1Q96FW1 271 aaPredicted RBP4.26□□□□□ -1.73
SCAF11-212ENST00000549162 RMND5BQ96G75 393 aaPredicted RBP4.26□□□□□ -1.73
SCAF11-212ENST00000549162 METTL17Q9H7H0 456 aaPredicted RBP4.26□□□□□ -1.73
SCAF11-212ENST00000549162 PPP1R3EQ9H7J1 279 aa4.26□□□□□ -1.73
SCAF11-212ENST00000549162 SELENONQ9NZV5 590 aa4.26□□□□□ -1.73
SCAF11-212ENST00000549162 TRBV11-1A0A0K0K1C0 115 aa4.26□□□□□ -1.73
SCAF11-212ENST00000549162 OVOL3O00110 214 aa4.26□□□□□ -1.73
SCAF11-212ENST00000549162 HRKO00198 91 aa4.26□□□□□ -1.73
SCAF11-212ENST00000549162 LRRTM2O43300 516 aa4.26□□□□□ -1.73
SCAF11-212ENST00000549162 SPARCP09486 303 aa4.26□□□□□ -1.73
SCAF11-212ENST00000549162 MPGP29372 298 aa4.26□□□□□ -1.73
SCAF11-212ENST00000549162 RBMS1P29558 406 aaKnown RBP4.26□□□□□ -1.73
SCAF11-212ENST00000549162 SSTR4P31391 388 aa4.26□□□□□ -1.73
SCAF11-212ENST00000549162 GLIPR1P48060 266 aa4.26□□□□□ -1.73
SCAF11-212ENST00000549162 EMX1Q04741 257 aaPredicted RBP4.26□□□□□ -1.73
SCAF11-212ENST00000549162 DBPQ10586 325 aaPredicted RBP4.26□□□□□ -1.73
SCAF11-212ENST00000549162 RAPSNQ13702 412 aa4.26□□□□□ -1.73
SCAF11-212ENST00000549162 NSDHLQ15738 373 aa4.26□□□□□ -1.73
SCAF11-212ENST00000549162 PRSS57Q6UWY2 283 aa4.26□□□□□ -1.73
SCAF11-212ENST00000549162 LRRN1Q6UXK5 716 aa4.26□□□□□ -1.73
SCAF11-212ENST00000549162 C1orf229Q6ZS94 237 aaPredicted RBP4.26□□□□□ -1.73
SCAF11-212ENST00000549162 ZNF621Q6ZSS3 439 aa4.26□□□□□ -1.73
SCAF11-212ENST00000549162 ZNF321PQ8N8H1 164 aa4.26□□□□□ -1.73
SCAF11-212ENST00000549162 SPERTQ8NA61 448 aa4.26□□□□□ -1.73
SCAF11-212ENST00000549162 OR52N5Q8NH56 324 aa4.26□□□□□ -1.73
SCAF11-212ENST00000549162 TBC1D15Q8TC07 691 aa4.26□□□□□ -1.73
SCAF11-212ENST00000549162 PEX11GQ96HA9 241 aa4.26□□□□□ -1.73
SCAF11-212ENST00000549162 C4orf45Q96LM5 186 aa4.26□□□□□ -1.73
SCAF11-212ENST00000549162 FNDC11Q9BVV2 318 aa4.26□□□□□ -1.73
SCAF11-212ENST00000549162 LAMP5Q9UJQ1 280 aa4.26□□□□□ -1.73
SCAF11-212ENST00000549162 MGAT4AQ9UM21 535 aa4.26□□□□□ -1.73
SCAF11-212ENST00000549162 A0A1W2PS29 197 aa4.25□□□□□ -1.73
SCAF11-212ENST00000549162 PQLC2LA1A4F0 135 aa4.25□□□□□ -1.73
SCAF11-212ENST00000549162 NCF1BA6NI72 391 aaPredicted RBP4.25□□□□□ -1.73
SCAF11-212ENST00000549162 NCF1CA8MVU1 366 aaPredicted RBP4.25□□□□□ -1.73
SCAF11-212ENST00000549162 PEX12O00623 359 aa4.25□□□□□ -1.73
SCAF11-212ENST00000549162 RGS10O43665 173 aa4.25□□□□□ -1.73
SCAF11-212ENST00000549162 CGB3P0DN86 165 aa4.25□□□□□ -1.73
SCAF11-212ENST00000549162 CGB7P0DN87 165 aa4.25□□□□□ -1.73
SCAF11-212ENST00000549162 PVRP15151 417 aa4.25□□□□□ -1.73
SCAF11-212ENST00000549162 MTNR1AP48039 350 aa4.25□□□□□ -1.73
SCAF11-212ENST00000549162 CYB561P49447 251 aa4.25□□□□□ -1.73
SCAF11-212ENST00000549162 DYNLT3P51808 116 aa4.25□□□□□ -1.73
SCAF11-212ENST00000549162 KLHL12Q53G59 568 aa4.25□□□□□ -1.73
SCAF11-212ENST00000549162 C1orf185Q5T7R7 199 aa4.25□□□□□ -1.73
SCAF11-212ENST00000549162 PEG10Q86TG7 708 aaKnown RBP4.25□□□□□ -1.73
SCAF11-212ENST00000549162 NKAIN4Q8IVV8 208 aa4.25□□□□□ -1.73
SCAF11-212ENST00000549162 OR52H1Q8NGJ2 320 aa4.25□□□□□ -1.73
SCAF11-212ENST00000549162 RAB40AQ8WXH6 277 aa4.25□□□□□ -1.73
SCAF11-212ENST00000549162 CACFD1Q9UGQ2 172 aa4.25□□□□□ -1.73
SCAF11-212ENST00000549162 hCG_38984A0A1B0GV85 526 aa4.25□□□□□ -1.73
SCAF11-212ENST00000549162 ATP6AP2A0A1C7CYW4 349 aa4.25□□□□□ -1.73
SCAF11-212ENST00000549162 DUXBA0A1W2PPF3 345 aa4.25□□□□□ -1.73
SCAF11-212ENST00000549162 VWC2LB2RUY7 222 aa4.25□□□□□ -1.73
SCAF11-212ENST00000549162 H7C417 338 aa4.25□□□□□ -1.73
SCAF11-212ENST00000549162 CSTAP01040 98 aa4.25□□□□□ -1.73
SCAF11-212ENST00000549162 AVPP01185 164 aa4.25□□□□□ -1.73
SCAF11-212ENST00000549162 MMP15P51511 669 aa4.25□□□□□ -1.73
SCAF11-212ENST00000549162 BTG1P62324 171 aa4.25□□□□□ -1.73
SCAF11-212ENST00000549162 RPL18Q07020 188 aaKnown RBP4.25□□□□□ -1.73
SCAF11-212ENST00000549162 IL24Q13007 206 aa4.25□□□□□ -1.73
SCAF11-212ENST00000549162 DDX39BQ13838 428 aaKnown RBP4.25□□□□□ -1.73
SCAF11-212ENST00000549162 KRT33BQ14525 404 aa4.25□□□□□ -1.73
SCAF11-212ENST00000549162 OR7E24Q6IFN5 339 aa4.25□□□□□ -1.73
SCAF11-212ENST00000549162 IZUMO2Q6UXV1 221 aa4.25□□□□□ -1.73
SCAF11-212ENST00000549162 ZNF704Q6ZNC4 412 aaPredicted RBP4.25□□□□□ -1.73
SCAF11-212ENST00000549162 TMEM91Q6ZNR0 172 aa4.25□□□□□ -1.73
SCAF11-212ENST00000549162 ZNF573Q86YE8 665 aa4.25□□□□□ -1.73
SCAF11-212ENST00000549162 STPG2Q8N412 459 aa4.25□□□□□ -1.73
SCAF11-212ENST00000549162 LINC00311Q8N616 119 aa4.25□□□□□ -1.73
SCAF11-212ENST00000549162 POU5F2Q8N7G0 328 aa4.25□□□□□ -1.73
SCAF11-212ENST00000549162 WDR31Q8NA23 367 aa4.25□□□□□ -1.73
SCAF11-212ENST00000549162 OR1J2Q8NGS2 313 aa4.25□□□□□ -1.73
SCAF11-212ENST00000549162 OR14K1Q8NGZ2 314 aa4.25□□□□□ -1.73
SCAF11-212ENST00000549162 PLA2G12AQ9BZM1 189 aa4.25□□□□□ -1.73
SCAF11-212ENST00000549162 ULBP3Q9BZM4 244 aa4.25□□□□□ -1.73
SCAF11-212ENST00000549162 CHST6Q9GZX3 395 aa4.25□□□□□ -1.73
SCAF11-212ENST00000549162 ZBTB20Q9HC78 741 aaPredicted RBP4.25□□□□□ -1.73
SCAF11-212ENST00000549162 ZNF71Q9NQZ8 489 aaPredicted RBP4.25□□□□□ -1.73
SCAF11-212ENST00000549162 NANSQ9NR45 359 aa4.25□□□□□ -1.73
SCAF11-212ENST00000549162 WIPI2Q9Y4P8 454 aa4.25□□□□□ -1.73
SCAF11-212ENST00000549162 PPIAL4AQ9Y536 164 aa4.25□□□□□ -1.73
SCAF11-212ENST00000549162 POMT1Q9Y6A1 747 aa4.25□□□□□ -1.73
SCAF11-212ENST00000549162 WWP2O00308 870 aa4.25□□□□□ -1.73
SCAF11-212ENST00000549162 YES1P07947 543 aa4.25□□□□□ -1.73
SCAF11-212ENST00000549162 PBLDP30039 288 aaPredicted RBP4.25□□□□□ -1.73
SCAF11-212ENST00000549162 GBX2P52951 348 aaPredicted RBP4.25□□□□□ -1.73
SCAF11-212ENST00000549162 KLRB1Q12918 225 aa4.25□□□□□ -1.73
SCAF11-212ENST00000549162 ASAH1Q13510 395 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms