RNA–Protein interactions for RNA: ENST00000547764.1

PRPF40B-206, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 803 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-206ENST00000547764 UNQ6126/PRO20091Q6UXV3 157 aa16.06■□□□□ 0.16
PRPF40B-206ENST00000547764 RFPL4BQ6ZWI9 263 aa16.06■□□□□ 0.16
PRPF40B-206ENST00000547764 BIVMQ86UB2 503 aa16.06■□□□□ 0.16
PRPF40B-206ENST00000547764 LINC00346Q8IVM7 164 aa16.06■□□□□ 0.16
PRPF40B-206ENST00000547764 OR51L1Q8NGJ5 315 aa16.06■□□□□ 0.16
PRPF40B-206ENST00000547764 OR1F12Q8NHA8 337 aa16.06■□□□□ 0.16
PRPF40B-206ENST00000547764 OR5K1Q8NHB7 308 aa16.06■□□□□ 0.16
PRPF40B-206ENST00000547764 ABHD4Q8TB40 342 aa16.06■□□□□ 0.16
PRPF40B-206ENST00000547764 SLC7A6Q92536 515 aa16.06■□□□□ 0.16
PRPF40B-206ENST00000547764 REG4Q9BYZ8 158 aa16.06■□□□□ 0.16
PRPF40B-206ENST00000547764 ABHD16AO95870 558 aa16.05■□□□□ 0.16
PRPF40B-206ENST00000547764 GYPBP06028 91 aa16.05■□□□□ 0.16
PRPF40B-206ENST00000547764 ERCC1P07992 297 aaPredicted RBP16.05■□□□□ 0.16
PRPF40B-206ENST00000547764 CLUP10909 449 aa16.05■□□□□ 0.16
PRPF40B-206ENST00000547764 GGT2P36268 569 aa16.05■□□□□ 0.16
PRPF40B-206ENST00000547764 SLC25A1P53007 311 aa16.05■□□□□ 0.16
PRPF40B-206ENST00000547764 SELENOVP59797 346 aa16.05■□□□□ 0.16
PRPF40B-206ENST00000547764 SLC18B1Q6NT16 456 aa16.05■□□□□ 0.16
PRPF40B-206ENST00000547764 FAHD1Q6P587 224 aa16.05■□□□□ 0.16
PRPF40B-206ENST00000547764 ARL9Q6T311 187 aa16.05■□□□□ 0.16
PRPF40B-206ENST00000547764 AMIGO2Q86SJ2 522 aa16.05■□□□□ 0.16
PRPF40B-206ENST00000547764 SLC25A40Q8TBP6 338 aa16.05■□□□□ 0.16
PRPF40B-206ENST00000547764 NEU4Q8WWR8 484 aaPredicted RBP16.05■□□□□ 0.16
PRPF40B-206ENST00000547764 LRTOMTQ8WZ04 291 aa16.05■□□□□ 0.16
PRPF40B-206ENST00000547764 FAM168AQ92567 244 aa16.05■□□□□ 0.16
PRPF40B-206ENST00000547764 MARS2Q96GW9 593 aaKnown RBP16.05■□□□□ 0.16
PRPF40B-206ENST00000547764 CDADC1Q9BWV3 514 aa16.05■□□□□ 0.16
PRPF40B-206ENST00000547764 OR2J1Q9GZK6 312 aa16.05■□□□□ 0.16
PRPF40B-206ENST00000547764 TPK1Q9H3S4 243 aa16.05■□□□□ 0.16
PRPF40B-206ENST00000547764 MS4A5Q9H3V2 200 aa16.05■□□□□ 0.16
PRPF40B-206ENST00000547764 ELOVL3Q9HB03 270 aa16.05■□□□□ 0.16
PRPF40B-206ENST00000547764 TAAR3PQ9P1P4 343 aa16.05■□□□□ 0.16
PRPF40B-206ENST00000547764 KIF17Q9P2E2 1029 aa16.05■□□□□ 0.16
PRPF40B-206ENST00000547764 CYB5R1Q9UHQ9 305 aa16.05■□□□□ 0.16
PRPF40B-206ENST00000547764 GRIP1Q9Y3R0 1128 aa16.05■□□□□ 0.16
PRPF40B-206ENST00000547764 TVP23AA6NH52 213 aa16.04■□□□□ 0.16
PRPF40B-206ENST00000547764 FCGR1AP12314 374 aa16.04■□□□□ 0.16
PRPF40B-206ENST00000547764 ZNF3P17036 446 aa16.04■□□□□ 0.16
PRPF40B-206ENST00000547764 SPI1P17947 270 aa16.04■□□□□ 0.16
PRPF40B-206ENST00000547764 DAPP51397 102 aa16.04■□□□□ 0.16
PRPF40B-206ENST00000547764 PPP1CBP62140 327 aa16.04■□□□□ 0.16
PRPF40B-206ENST00000547764 CDK5Q00535 292 aa16.04■□□□□ 0.16
PRPF40B-206ENST00000547764 NKPD1Q17RQ9 610 aa16.04■□□□□ 0.16
PRPF40B-206ENST00000547764 ALKBH6Q3KRA9 238 aa16.04■□□□□ 0.16
PRPF40B-206ENST00000547764 ZNF718Q3SXZ3 478 aa16.04■□□□□ 0.16
PRPF40B-206ENST00000547764 ELFN2Q5R3F8 820 aa16.04■□□□□ 0.16
PRPF40B-206ENST00000547764 LYPD4Q6UWN0 246 aa16.04■□□□□ 0.16
PRPF40B-206ENST00000547764 CFAP77Q6ZQR2 320 aa16.04■□□□□ 0.16
PRPF40B-206ENST00000547764 HIPK1Q86Z02 1210 aa16.04■□□□□ 0.16
PRPF40B-206ENST00000547764 C1orf174Q8IYL3 243 aa16.04■□□□□ 0.16
PRPF40B-206ENST00000547764 MAPK1IP1LQ8NDC0 245 aa16.04■□□□□ 0.16
PRPF40B-206ENST00000547764 OR2AJ1Q8NGZ0 328 aa16.04■□□□□ 0.16
PRPF40B-206ENST00000547764 C10orf105Q8TEF2 133 aa16.04■□□□□ 0.16
PRPF40B-206ENST00000547764 DNAJC9Q8WXX5 260 aa16.04■□□□□ 0.16
PRPF40B-206ENST00000547764 HDHD2Q9H0R4 259 aa16.04■□□□□ 0.16
PRPF40B-206ENST00000547764 TBCCD1Q9NVR7 557 aa16.04■□□□□ 0.16
PRPF40B-206ENST00000547764 ATPIF1Q9UII2 106 aa16.04■□□□□ 0.16
PRPF40B-206ENST00000547764 FAM183AA6NL82 134 aa16.03■□□□□ 0.16
PRPF40B-206ENST00000547764 G3V2T6 193 aa16.03■□□□□ 0.16
PRPF40B-206ENST00000547764 IGHV3-13P01766 116 aa16.03■□□□□ 0.16
PRPF40B-206ENST00000547764 DBHP09172 617 aa16.03■□□□□ 0.16
PRPF40B-206ENST00000547764 CSF3P09919 207 aa16.03■□□□□ 0.16
PRPF40B-206ENST00000547764 NAT2P11245 290 aa16.03■□□□□ 0.16
PRPF40B-206ENST00000547764 ZNF823P16415 610 aa16.03■□□□□ 0.16
PRPF40B-206ENST00000547764 GCH1P30793 250 aa16.03■□□□□ 0.16
PRPF40B-206ENST00000547764 MPV17P39210 176 aa16.03■□□□□ 0.16
PRPF40B-206ENST00000547764 ACTR3P61158 418 aa16.03■□□□□ 0.16
PRPF40B-206ENST00000547764 KPNB1Q14974 876 aaKnown RBP16.03■□□□□ 0.16
PRPF40B-206ENST00000547764 MBNL2Q5VZF2 373 aaKnown RBP16.03■□□□□ 0.16
PRPF40B-206ENST00000547764 ZNF511Q8NB15 262 aa16.03■□□□□ 0.16
PRPF40B-206ENST00000547764 KLF14Q8TD94 323 aaPredicted RBP16.03■□□□□ 0.16
PRPF40B-206ENST00000547764 PTP4A1Q93096 173 aa16.03■□□□□ 0.16
PRPF40B-206ENST00000547764 COQ7Q99807 217 aa16.03■□□□□ 0.16
PRPF40B-206ENST00000547764 HCAR1Q9BXC0 346 aa16.03■□□□□ 0.16
PRPF40B-206ENST00000547764 MED20Q9H944 212 aa16.03■□□□□ 0.16
PRPF40B-206ENST00000547764 WDR76Q9H967 626 aa16.03■□□□□ 0.16
PRPF40B-206ENST00000547764 PAPOLBQ9NRJ5 636 aaKnown RBP16.03■□□□□ 0.16
PRPF40B-206ENST00000547764 SLCO1C1Q9NYB5 712 aa16.03■□□□□ 0.16
PRPF40B-206ENST00000547764 GPR160Q9UJ42 338 aa16.03■□□□□ 0.16
PRPF40B-206ENST00000547764 KCNG2Q9UJ96 466 aa16.03■□□□□ 0.16
PRPF40B-206ENST00000547764 HMGN1P05114 100 aa16.02■□□□□ 0.16
PRPF40B-206ENST00000547764 DAOP14920 347 aa16.02■□□□□ 0.16
PRPF40B-206ENST00000547764 ZNF23P17027 643 aa16.02■□□□□ 0.16
PRPF40B-206ENST00000547764 FMO3P31513 532 aa16.02■□□□□ 0.16
PRPF40B-206ENST00000547764 RPS27P42677 84 aaKnown RBP16.02■□□□□ 0.16
PRPF40B-206ENST00000547764 PDLIM4P50479 330 aa16.02■□□□□ 0.16
PRPF40B-206ENST00000547764 CARTPTQ16568 116 aa16.02■□□□□ 0.16
PRPF40B-206ENST00000547764 RSPO1Q2MKA7 263 aaPredicted RBP16.02■□□□□ 0.16
PRPF40B-206ENST00000547764 TMEM255AQ5JRV8 349 aa16.02■□□□□ 0.16
PRPF40B-206ENST00000547764 TMEM236Q5W0B7 351 aa16.02■□□□□ 0.16
PRPF40B-206ENST00000547764 TMEM154Q6P9G4 183 aa16.02■□□□□ 0.16
PRPF40B-206ENST00000547764 IPCEF1Q8WWN9 437 aaPredicted RBP16.02■□□□□ 0.16
PRPF40B-206ENST00000547764 PYDC1Q8WXC3 89 aa16.02■□□□□ 0.16
PRPF40B-206ENST00000547764 OTULINQ96BN8 352 aa16.02■□□□□ 0.16
PRPF40B-206ENST00000547764 MAP6Q96JE9 813 aa16.02■□□□□ 0.16
PRPF40B-206ENST00000547764 DCLRE1CQ96SD1 692 aaKnown RBP16.02■□□□□ 0.16
PRPF40B-206ENST00000547764 PITX2Q99697 317 aa16.02■□□□□ 0.16
PRPF40B-206ENST00000547764 SEMA6AQ9H2E6 1030 aa16.02■□□□□ 0.16
PRPF40B-206ENST00000547764 MYOZ1Q9NP98 299 aaPredicted RBP16.02■□□□□ 0.16
PRPF40B-206ENST00000547764 PNRC2Q9NPJ4 139 aaKnown RBP16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms