RNA–Protein interactions for RNA: ENST00000546744.5

PTCH1-212, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 4,389 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-212ENST00000546744 ZNF749O43361 778 aa11.7□□□□□ -0.54
PTCH1-212ENST00000546744 NSDHLQ15738 373 aa11.7□□□□□ -0.54
PTCH1-212ENST00000546744 SLC36A2Q495M3 483 aa11.7□□□□□ -0.54
PTCH1-212ENST00000546744 GGNBP1Q5YKI7 109 aa11.7□□□□□ -0.54
PTCH1-212ENST00000546744 GLIPR1L1Q6UWM5 242 aa11.7□□□□□ -0.54
PTCH1-212ENST00000546744 TMPRSS7Q7RTY8 843 aa11.7□□□□□ -0.54
PTCH1-212ENST00000546744 PLXDC1Q8IUK5 500 aa11.7□□□□□ -0.54
PTCH1-212ENST00000546744 DND1Q8IYX4 353 aaKnown RBP11.7□□□□□ -0.54
PTCH1-212ENST00000546744 LINC00518Q8N0U6 118 aa11.7□□□□□ -0.54
PTCH1-212ENST00000546744 ZNF511Q8NB15 262 aa11.7□□□□□ -0.54
PTCH1-212ENST00000546744 SGPP1Q9BX95 441 aa11.7□□□□□ -0.54
PTCH1-212ENST00000546744 VN1R3Q9BXE9 311 aa11.7□□□□□ -0.54
PTCH1-212ENST00000546744 SULT2B1O00204 365 aa11.69□□□□□ -0.54
PTCH1-212ENST00000546744 F3P13726 295 aa11.69□□□□□ -0.54
PTCH1-212ENST00000546744 ABCD3P28288 659 aa11.69□□□□□ -0.54
PTCH1-212ENST00000546744 SEC13P55735 322 aa11.69□□□□□ -0.54
PTCH1-212ENST00000546744 SNRPNP63162 240 aaKnown RBP11.69□□□□□ -0.54
PTCH1-212ENST00000546744 C2orf27AQ580R0 203 aa11.69□□□□□ -0.54
PTCH1-212ENST00000546744 ZNF684Q5T5D7 378 aa11.69□□□□□ -0.54
PTCH1-212ENST00000546744 AADACL3Q5VUY0 350 aa11.69□□□□□ -0.54
PTCH1-212ENST00000546744 PLPP7Q8NBV4 271 aa11.69□□□□□ -0.54
PTCH1-212ENST00000546744 OR4C5Q8NGB2 326 aa11.69□□□□□ -0.54
PTCH1-212ENST00000546744 EVPLQ92817 2033 aa11.69□□□□□ -0.54
PTCH1-212ENST00000546744 AKR1E2Q96JD6 320 aa11.69□□□□□ -0.54
PTCH1-212ENST00000546744 NOL4LQ96MY1 436 aaPredicted RBP11.69□□□□□ -0.54
PTCH1-212ENST00000546744 DEFB118Q96PH6 123 aa11.69□□□□□ -0.54
PTCH1-212ENST00000546744 MAP3K3Q99759 626 aa11.69□□□□□ -0.54
PTCH1-212ENST00000546744 ACTR3CQ9C0K3 210 aaPredicted RBP11.69□□□□□ -0.54
PTCH1-212ENST00000546744 SRPK3Q9UPE1 567 aa11.69□□□□□ -0.54
PTCH1-212ENST00000546744 YTHDF2Q9Y5A9 579 aaKnown RBP11.69□□□□□ -0.54
PTCH1-212ENST00000546744 ANKRD20A5PA0PJZ0 165 aa11.69□□□□□ -0.54
PTCH1-212ENST00000546744 SERPINE3A8MV23 424 aa11.69□□□□□ -0.54
PTCH1-212ENST00000546744 A8MVM7 634 aa11.69□□□□□ -0.54
PTCH1-212ENST00000546744 OR7C1O76099 320 aaPredicted RBP11.69□□□□□ -0.54
PTCH1-212ENST00000546744 LIMS3P0CW19 117 aa11.69□□□□□ -0.54
PTCH1-212ENST00000546744 LIMS4P0CW20 117 aa11.69□□□□□ -0.54
PTCH1-212ENST00000546744 HOXB1P14653 301 aaPredicted RBP11.69□□□□□ -0.54
PTCH1-212ENST00000546744 ALOX5APP20292 161 aa11.69□□□□□ -0.54
PTCH1-212ENST00000546744 BMPR1AP36894 532 aa11.69□□□□□ -0.54
PTCH1-212ENST00000546744 SLC35A1P78382 337 aa11.69□□□□□ -0.54
PTCH1-212ENST00000546744 NAAAQ02083 359 aa11.69□□□□□ -0.54
PTCH1-212ENST00000546744 C2orf76Q3KRA6 126 aa11.69□□□□□ -0.54
PTCH1-212ENST00000546744 PRSS54Q6PEW0 395 aa11.69□□□□□ -0.54
PTCH1-212ENST00000546744 NPIPA5A0A0B4J1W7 369 aa11.69□□□□□ -0.54
PTCH1-212ENST00000546744 FAM166BA8MTA8 275 aa11.69□□□□□ -0.54
PTCH1-212ENST00000546744 B4GALT3O60512 393 aa11.69□□□□□ -0.54
PTCH1-212ENST00000546744 DUS4LO95620 317 aaKnown RBP11.69□□□□□ -0.54
PTCH1-212ENST00000546744 F13BP05160 661 aa11.69□□□□□ -0.54
PTCH1-212ENST00000546744 RABIFP47224 123 aa11.69□□□□□ -0.54
PTCH1-212ENST00000546744 SNU13P55769 128 aaKnown RBP11.69□□□□□ -0.54
PTCH1-212ENST00000546744 ECH1Q13011 328 aa11.69□□□□□ -0.54
PTCH1-212ENST00000546744 RAB30Q15771 203 aa11.69□□□□□ -0.54
PTCH1-212ENST00000546744 RAET1LQ5VY80 246 aa11.69□□□□□ -0.54
PTCH1-212ENST00000546744 SLC38A9Q8NBW4 561 aa11.69□□□□□ -0.54
PTCH1-212ENST00000546744 LHX4Q969G2 390 aa11.69□□□□□ -0.54
PTCH1-212ENST00000546744 USB1Q9BQ65 265 aaKnown RBP11.69□□□□□ -0.54
PTCH1-212ENST00000546744 DOCK5Q9H7D0 1870 aa11.68□□□□□ -0.54
PTCH1-212ENST00000546744 FITM1A5D6W6 292 aa11.68□□□□□ -0.54
PTCH1-212ENST00000546744 A6NLC8 198 aa11.68□□□□□ -0.54
PTCH1-212ENST00000546744 CBX7O95931 251 aa11.68□□□□□ -0.54
PTCH1-212ENST00000546744 PTHLHP12272 177 aa11.68□□□□□ -0.54
PTCH1-212ENST00000546744 FCGR2AP12318 317 aa11.68□□□□□ -0.54
PTCH1-212ENST00000546744 FABP6P51161 128 aa11.68□□□□□ -0.54
PTCH1-212ENST00000546744 POU3F1Q03052 451 aaPredicted RBP11.68□□□□□ -0.54
PTCH1-212ENST00000546744 MFAP5Q13361 173 aa11.68□□□□□ -0.54
PTCH1-212ENST00000546744 OR7A5Q15622 319 aa11.68□□□□□ -0.54
PTCH1-212ENST00000546744 VRK3Q8IV63 474 aa11.68□□□□□ -0.54
PTCH1-212ENST00000546744 OR14A16Q8NHC5 309 aa11.68□□□□□ -0.54
PTCH1-212ENST00000546744 NPRL2Q8WTW4 380 aa11.68□□□□□ -0.54
PTCH1-212ENST00000546744 PRRX2Q99811 253 aa11.68□□□□□ -0.54
PTCH1-212ENST00000546744 CHST6Q9GZX3 395 aa11.68□□□□□ -0.54
PTCH1-212ENST00000546744 MFNGO00587 321 aa11.68□□□□□ -0.54
PTCH1-212ENST00000546744 FPR2P25090 351 aa11.68□□□□□ -0.54
PTCH1-212ENST00000546744 RBP2P50120 134 aa11.68□□□□□ -0.54
PTCH1-212ENST00000546744 HNRNPA3P51991 378 aaKnown RBP11.68□□□□□ -0.54
PTCH1-212ENST00000546744 RPL27P61353 136 aaKnown RBP11.68□□□□□ -0.54
PTCH1-212ENST00000546744 BAXQ07812 192 aa11.68□□□□□ -0.54
PTCH1-212ENST00000546744 ZNF787Q6DD87 383 aa11.68□□□□□ -0.54
PTCH1-212ENST00000546744 MOB1BQ7L9L4 216 aa11.68□□□□□ -0.54
PTCH1-212ENST00000546744 FGGYQ96C11 551 aa11.68□□□□□ -0.54
PTCH1-212ENST00000546744 CIB3Q96Q77 187 aaPredicted RBP11.68□□□□□ -0.54
PTCH1-212ENST00000546744 ALX4Q9H161 411 aaPredicted RBP11.68□□□□□ -0.54
PTCH1-212ENST00000546744 OR51M1Q9H341 326 aa11.68□□□□□ -0.54
PTCH1-212ENST00000546744 OPN4Q9UHM6 478 aa11.68□□□□□ -0.54
PTCH1-212ENST00000546744 CBY3A6NI87 242 aa11.68□□□□□ -0.54
PTCH1-212ENST00000546744 PLA2G10O15496 165 aa11.68□□□□□ -0.54
PTCH1-212ENST00000546744 IL33O95760 270 aa11.68□□□□□ -0.54
PTCH1-212ENST00000546744 GABRA2P47869 451 aa11.68□□□□□ -0.54
PTCH1-212ENST00000546744 PDZD11Q5EBL8 140 aa11.68□□□□□ -0.54
PTCH1-212ENST00000546744 ADAMTSL4Q6UY14 1074 aa11.68□□□□□ -0.54
PTCH1-212ENST00000546744 TSTD1Q8NFU3 115 aa11.68□□□□□ -0.54
PTCH1-212ENST00000546744 Q96M85 177 aa11.68□□□□□ -0.54
PTCH1-212ENST00000546744 FKRPQ9H9S5 495 aa11.68□□□□□ -0.54
PTCH1-212ENST00000546744 KLK11Q9UBX7 282 aa11.68□□□□□ -0.54
PTCH1-212ENST00000546744 FLVCR1Q9Y5Y0 555 aa11.68□□□□□ -0.54
PTCH1-212ENST00000546744 WSB1Q9Y6I7 421 aa11.68□□□□□ -0.54
PTCH1-212ENST00000546744 A0A1W2PP55 124 aa11.67□□□□□ -0.54
PTCH1-212ENST00000546744 CDK2AP1O14519 115 aa11.67□□□□□ -0.54
PTCH1-212ENST00000546744 SELENOFO60613 162 aa11.67□□□□□ -0.54
PTCH1-212ENST00000546744 TRAPPC6AO75865 159 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms