RNA–Protein interactions for RNA: ENST00000546534.1

SCAF11-208, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 3

Gene SCAF11, Length 705 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-208ENST00000546534 HAVCR1Q96D42 359 aa10.59□□□□□ -0.71
SCAF11-208ENST00000546534 MPP4Q96JB8 637 aa10.59□□□□□ -0.71
SCAF11-208ENST00000546534 MAELQ96JY0 434 aaKnown RBP10.59□□□□□ -0.71
SCAF11-208ENST00000546534 ZNF426Q9BUY5 554 aa10.59□□□□□ -0.71
SCAF11-208ENST00000546534 TMEM38AQ9H6F2 299 aa10.59□□□□□ -0.71
SCAF11-208ENST00000546534 MEPEQ9NQ76 525 aaPredicted RBP10.59□□□□□ -0.71
SCAF11-208ENST00000546534 TBCCD1Q9NVR7 557 aa10.59□□□□□ -0.71
SCAF11-208ENST00000546534 CLN8Q9UBY8 286 aa10.59□□□□□ -0.71
SCAF11-208ENST00000546534 STARD10Q9Y365 291 aa10.59□□□□□ -0.71
SCAF11-208ENST00000546534 IGHV3-64DA0A0J9YX35 117 aa10.58□□□□□ -0.72
SCAF11-208ENST00000546534 CENPVL3A0A0U1RRI6 287 aa10.58□□□□□ -0.72
SCAF11-208ENST00000546534 TRAPPC13A5PLN9 417 aa10.58□□□□□ -0.72
SCAF11-208ENST00000546534 C22orf46C9J442 243 aa10.58□□□□□ -0.72
SCAF11-208ENST00000546534 OPN1SWP03999 348 aa10.58□□□□□ -0.72
SCAF11-208ENST00000546534 TUBG1P23258 451 aa10.58□□□□□ -0.72
SCAF11-208ENST00000546534 CFHR2P36980 270 aa10.58□□□□□ -0.72
SCAF11-208ENST00000546534 PCBP3P57721 371 aaKnown RBP10.58□□□□□ -0.72
SCAF11-208ENST00000546534 PCBD1P61457 104 aa10.58□□□□□ -0.72
SCAF11-208ENST00000546534 ENDOGQ14249 297 aaKnown RBP10.58□□□□□ -0.72
SCAF11-208ENST00000546534 FAM189A2Q15884 450 aa10.58□□□□□ -0.72
SCAF11-208ENST00000546534 ZNF404Q494X3 552 aa10.58□□□□□ -0.72
SCAF11-208ENST00000546534 Q6ZSV7 163 aa10.58□□□□□ -0.72
SCAF11-208ENST00000546534 NLRC3Q7RTR2 1065 aa10.58□□□□□ -0.72
SCAF11-208ENST00000546534 OR5AS1Q8N127 324 aa10.58□□□□□ -0.72
SCAF11-208ENST00000546534 ATG16L2Q8NAA4 619 aa10.58□□□□□ -0.72
SCAF11-208ENST00000546534 ZSCAN4Q8NAM6 433 aaPredicted RBP10.58□□□□□ -0.72
SCAF11-208ENST00000546534 OR10AD1Q8NGE0 317 aa10.58□□□□□ -0.72
SCAF11-208ENST00000546534 MOSPD2Q8NHP6 518 aa10.58□□□□□ -0.72
SCAF11-208ENST00000546534 MEGF10Q96KG7 1140 aa10.58□□□□□ -0.72
SCAF11-208ENST00000546534 OR52B2Q96RD2 323 aa10.58□□□□□ -0.72
SCAF11-208ENST00000546534 TBX15Q96SF7 602 aa10.58□□□□□ -0.72
SCAF11-208ENST00000546534 IKZF5Q9H5V7 419 aa10.58□□□□□ -0.72
SCAF11-208ENST00000546534 SSU72Q9NP77 194 aaKnown RBP10.58□□□□□ -0.72
SCAF11-208ENST00000546534 TUBG2Q9NRH3 451 aa10.58□□□□□ -0.72
SCAF11-208ENST00000546534 ANGPT4Q9Y264 503 aa10.58□□□□□ -0.72
SCAF11-208ENST00000546534 P2RY10O00398 339 aa10.57□□□□□ -0.72
SCAF11-208ENST00000546534 ENSAO43768 121 aaKnown RBP10.57□□□□□ -0.72
SCAF11-208ENST00000546534 OR7A10O76100 309 aa10.57□□□□□ -0.72
SCAF11-208ENST00000546534 FUT1P19526 365 aa10.57□□□□□ -0.72
SCAF11-208ENST00000546534 PPIBP23284 216 aaKnown RBP10.57□□□□□ -0.72
SCAF11-208ENST00000546534 IER3P46695 156 aa10.57□□□□□ -0.72
SCAF11-208ENST00000546534 ZNF841Q6ZN19 808 aa10.57□□□□□ -0.72
SCAF11-208ENST00000546534 MAVSQ7Z434 540 aa10.57□□□□□ -0.72
SCAF11-208ENST00000546534 REC114Q7Z4M0 266 aa10.57□□□□□ -0.72
SCAF11-208ENST00000546534 PTOV1Q86YD1 416 aa10.57□□□□□ -0.72
SCAF11-208ENST00000546534 CLDN22Q8N7P3 220 aa10.57□□□□□ -0.72
SCAF11-208ENST00000546534 GATAD2BQ8WXI9 593 aa10.57□□□□□ -0.72
SCAF11-208ENST00000546534 MAGEB18Q96M61 343 aa10.57□□□□□ -0.72
SCAF11-208ENST00000546534 CITED4Q96RK1 184 aa10.57□□□□□ -0.72
SCAF11-208ENST00000546534 PAIP2Q9BPZ3 127 aaKnown RBP10.57□□□□□ -0.72
SCAF11-208ENST00000546534 PRSS27Q9BQR3 290 aa10.57□□□□□ -0.72
SCAF11-208ENST00000546534 TMEM109Q9BVC6 243 aa10.57□□□□□ -0.72
SCAF11-208ENST00000546534 C16orf95Q9H693 158 aa10.57□□□□□ -0.72
SCAF11-208ENST00000546534 ACOXLQ9NUZ1 547 aa10.57□□□□□ -0.72
SCAF11-208ENST00000546534 VAPAQ9P0L0 249 aa10.57□□□□□ -0.72
SCAF11-208ENST00000546534 KIF17Q9P2E2 1029 aa10.57□□□□□ -0.72
SCAF11-208ENST00000546534 STX18Q9P2W9 335 aaKnown RBP10.57□□□□□ -0.72
SCAF11-208ENST00000546534 NDRG4Q9ULP0 352 aaKnown RBP10.57□□□□□ -0.72
SCAF11-208ENST00000546534 GMEB1Q9Y692 573 aa10.57□□□□□ -0.72
SCAF11-208ENST00000546534 RYR3Q15413 4870 aa10.57□□□□□ -0.72
SCAF11-208ENST00000546534 GMNCA6NCL1 334 aa10.56□□□□□ -0.72
SCAF11-208ENST00000546534 ZNF879B4DU55 563 aa10.56□□□□□ -0.72
SCAF11-208ENST00000546534 M0QX08 132 aa10.56□□□□□ -0.72
SCAF11-208ENST00000546534 PHYHO14832 338 aa10.56□□□□□ -0.72
SCAF11-208ENST00000546534 PIP5K1CO60331 668 aa10.56□□□□□ -0.72
SCAF11-208ENST00000546534 TOX4O94842 621 aa10.56□□□□□ -0.72
SCAF11-208ENST00000546534 FSTL3O95633 263 aa10.56□□□□□ -0.72
SCAF11-208ENST00000546534 MT-ND1P03886 318 aa10.56□□□□□ -0.72
SCAF11-208ENST00000546534 OPN1MWP04001 364 aa10.56□□□□□ -0.72
SCAF11-208ENST00000546534 SCG5P05408 212 aa10.56□□□□□ -0.72
SCAF11-208ENST00000546534 OPN1MW2P0DN77 364 aa10.56□□□□□ -0.72
SCAF11-208ENST00000546534 OPN1MW3P0DN78 364 aa10.56□□□□□ -0.72
SCAF11-208ENST00000546534 MMP9P14780 707 aa10.56□□□□□ -0.72
SCAF11-208ENST00000546534 GPX2P18283 190 aa10.56□□□□□ -0.72
SCAF11-208ENST00000546534 PMELP40967 661 aa10.56□□□□□ -0.72
SCAF11-208ENST00000546534 GUCY1A3Q02108 690 aa10.56□□□□□ -0.72
SCAF11-208ENST00000546534 ZNF181Q2M3W8 571 aa10.56□□□□□ -0.72
SCAF11-208ENST00000546534 PAGE3Q5JUK9 113 aa10.56□□□□□ -0.72
SCAF11-208ENST00000546534 FOXL2NBQ6ZUU3 175 aa10.56□□□□□ -0.72
SCAF11-208ENST00000546534 MOGAT3Q86VF5 341 aa10.56□□□□□ -0.72
SCAF11-208ENST00000546534 LDLRAD3Q86YD5 345 aa10.56□□□□□ -0.72
SCAF11-208ENST00000546534 PFN4Q8NHR9 129 aa10.56□□□□□ -0.72
SCAF11-208ENST00000546534 MRAPQ8TCY5 172 aa10.56□□□□□ -0.72
SCAF11-208ENST00000546534 PTP4A1Q93096 173 aa10.56□□□□□ -0.72
SCAF11-208ENST00000546534 RBP7Q96R05 134 aa10.56□□□□□ -0.72
SCAF11-208ENST00000546534 TRIM15Q9C019 465 aa10.56□□□□□ -0.72
SCAF11-208ENST00000546534 TXNIPQ9H3M7 391 aa10.56□□□□□ -0.72
SCAF11-208ENST00000546534 KCNK9Q9NPC2 374 aa10.56□□□□□ -0.72
SCAF11-208ENST00000546534 THAP1Q9NVV9 213 aa10.56□□□□□ -0.72
SCAF11-208ENST00000546534 TRBV5-3A0A0A0MS03 114 aa10.55□□□□□ -0.72
SCAF11-208ENST00000546534 IGHV1-69DA0A0B4J2H0 117 aa10.55□□□□□ -0.72
SCAF11-208ENST00000546534 A0A0U1RQK1 487 aa10.55□□□□□ -0.72
SCAF11-208ENST00000546534 A0A1W2PPL8 197 aa10.55□□□□□ -0.72
SCAF11-208ENST00000546534 NPIPB13A6NJU9 1138 aa10.55□□□□□ -0.72
SCAF11-208ENST00000546534 LRRC30A6NM36 301 aa10.55□□□□□ -0.72
SCAF11-208ENST00000546534 C12orf71A8MTZ7 269 aa10.55□□□□□ -0.72
SCAF11-208ENST00000546534 NPIPB4C9JG80 1138 aa10.55□□□□□ -0.72
SCAF11-208ENST00000546534 F5H5P2 479 aa10.55□□□□□ -0.72
SCAF11-208ENST00000546534 RGS16O15492 202 aaPredicted RBP10.55□□□□□ -0.72
SCAF11-208ENST00000546534 SNNO75324 88 aaPredicted RBP10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms