RNA–Protein interactions for RNA: ENST00000546411.6

CUX1-211, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CUX1, Length 4,212 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-211ENST00000546411 A0A0B4J2A0 478 aa14.15□□□□□ -0.14
CUX1-211ENST00000546411 TNFSF14O43557 240 aa14.15□□□□□ -0.14
CUX1-211ENST00000546411 SULT1B1O43704 296 aa14.15□□□□□ -0.14
CUX1-211ENST00000546411 SCO1O75880 301 aa14.15□□□□□ -0.14
CUX1-211ENST00000546411 CNOT4O95628 575 aaKnown RBP14.15□□□□□ -0.14
CUX1-211ENST00000546411 EFEMP2O95967 443 aa14.15□□□□□ -0.14
CUX1-211ENST00000546411 UBE2IP63279 158 aaKnown RBP14.15□□□□□ -0.14
CUX1-211ENST00000546411 RIN1Q13671 783 aa14.15□□□□□ -0.14
CUX1-211ENST00000546411 C5orf46Q6UWT4 87 aa14.15□□□□□ -0.14
CUX1-211ENST00000546411 CPEB2Q7Z5Q1 589 aaKnown RBP14.15□□□□□ -0.14
CUX1-211ENST00000546411 SGPP2Q8IWX5 399 aa14.15□□□□□ -0.14
CUX1-211ENST00000546411 BHLHE23Q8NDY6 225 aa14.15□□□□□ -0.14
CUX1-211ENST00000546411 SHPKQ9UHJ6 478 aa14.15□□□□□ -0.14
CUX1-211ENST00000546411 DICER1Q9UPY3 1922 aaKnown RBP14.15□□□□□ -0.15
CUX1-211ENST00000546411 GJE1A6NN92 205 aa14.14□□□□□ -0.15
CUX1-211ENST00000546411 PYCARD-AS1I3L0S3 204 aa14.14□□□□□ -0.15
CUX1-211ENST00000546411 S100A11P31949 105 aa14.14□□□□□ -0.15
CUX1-211ENST00000546411 SMAD4Q13485 552 aaKnown RBP14.14□□□□□ -0.15
CUX1-211ENST00000546411 PLEKHN1Q494U1 663 aaPredicted RBP14.14□□□□□ -0.15
CUX1-211ENST00000546411 DMKNQ6E0U4 476 aaPredicted RBP14.14□□□□□ -0.15
CUX1-211ENST00000546411 MOB3CQ70IA8 216 aa14.14□□□□□ -0.15
CUX1-211ENST00000546411 MRPL21Q7Z2W9 205 aaKnown RBP14.14□□□□□ -0.15
CUX1-211ENST00000546411 SULF2Q8IWU5 870 aa14.14□□□□□ -0.15
CUX1-211ENST00000546411 DND1Q8IYX4 353 aaKnown RBP14.14□□□□□ -0.15
CUX1-211ENST00000546411 ESX1Q8N693 406 aa14.14□□□□□ -0.15
CUX1-211ENST00000546411 ZNF680Q8NEM1 530 aa14.14□□□□□ -0.15
CUX1-211ENST00000546411 SGCZQ96LD1 299 aa14.14□□□□□ -0.15
CUX1-211ENST00000546411 OR5V1Q9UGF6 321 aa14.14□□□□□ -0.15
CUX1-211ENST00000546411 PADI1Q9ULC6 663 aa14.14□□□□□ -0.15
CUX1-211ENST00000546411 LRP12Q9Y561 859 aa14.14□□□□□ -0.15
CUX1-211ENST00000546411 WDR87Q6ZQQ6 2873 aa14.14□□□□□ -0.15
CUX1-211ENST00000546411 GMDSO60547 372 aa14.14□□□□□ -0.15
CUX1-211ENST00000546411 ACAA2P42765 397 aaKnown RBP14.14□□□□□ -0.15
CUX1-211ENST00000546411 SLC35A1P78382 337 aa14.14□□□□□ -0.15
CUX1-211ENST00000546411 MALLQ13021 153 aa14.14□□□□□ -0.15
CUX1-211ENST00000546411 PLCXD3Q63HM9 321 aa14.14□□□□□ -0.15
CUX1-211ENST00000546411 ARSKQ6UWY0 536 aa14.14□□□□□ -0.15
CUX1-211ENST00000546411 GABRG1Q8N1C3 465 aa14.14□□□□□ -0.15
CUX1-211ENST00000546411 OR10G3Q8NGC4 313 aa14.14□□□□□ -0.15
CUX1-211ENST00000546411 IL1F10Q8WWZ1 152 aa14.14□□□□□ -0.15
CUX1-211ENST00000546411 EIF5A2Q9GZV4 153 aaKnown RBP14.14□□□□□ -0.15
CUX1-211ENST00000546411 GLTPQ9NZD2 209 aa14.14□□□□□ -0.15
CUX1-211ENST00000546411 hCG_1807616A0A1W2PRN6 198 aa14.14□□□□□ -0.15
CUX1-211ENST00000546411 FADS1O60427 444 aa14.14□□□□□ -0.15
CUX1-211ENST00000546411 HOXC4P09017 264 aaPredicted RBP14.14□□□□□ -0.15
CUX1-211ENST00000546411 POU3F3P20264 500 aaPredicted RBP14.14□□□□□ -0.15
CUX1-211ENST00000546411 MMP15P51511 669 aa14.14□□□□□ -0.15
CUX1-211ENST00000546411 PRSS12P56730 875 aa14.14□□□□□ -0.15
CUX1-211ENST00000546411 CCL7P80098 99 aa14.14□□□□□ -0.15
CUX1-211ENST00000546411 ST3GAL2Q16842 350 aa14.14□□□□□ -0.15
CUX1-211ENST00000546411 TMPPEQ6ZT21 453 aa14.14□□□□□ -0.15
CUX1-211ENST00000546411 KCNG3Q8TAE7 436 aa14.14□□□□□ -0.15
CUX1-211ENST00000546411 SLC23A1Q9UHI7 598 aa14.14□□□□□ -0.15
CUX1-211ENST00000546411 IGHV3-64DA0A0J9YX35 117 aa14.14□□□□□ -0.15
CUX1-211ENST00000546411 C17orf51A8MQB3 221 aa14.14□□□□□ -0.15
CUX1-211ENST00000546411 H7C2Y5 167 aa14.14□□□□□ -0.15
CUX1-211ENST00000546411 BCKDHBP21953 392 aa14.14□□□□□ -0.15
CUX1-211ENST00000546411 RAB2AP61019 212 aa14.14□□□□□ -0.15
CUX1-211ENST00000546411 GNMTQ14749 295 aa14.14□□□□□ -0.15
CUX1-211ENST00000546411 ZNF141Q15928 474 aa14.14□□□□□ -0.15
CUX1-211ENST00000546411 OR51A4Q8NGJ6 313 aa14.14□□□□□ -0.15
CUX1-211ENST00000546411 CMBLQ96DG6 245 aa14.14□□□□□ -0.15
CUX1-211ENST00000546411 GNRHR2Q96P88 292 aa14.14□□□□□ -0.15
CUX1-211ENST00000546411 ALX3O95076 343 aa14.13□□□□□ -0.15
CUX1-211ENST00000546411 PDGFAP04085 211 aa14.13□□□□□ -0.15
CUX1-211ENST00000546411 GNB3P16520 340 aa14.13□□□□□ -0.15
CUX1-211ENST00000546411 GPR3P46089 330 aa14.13□□□□□ -0.15
CUX1-211ENST00000546411 LUMP51884 338 aaPredicted RBP14.13□□□□□ -0.15
CUX1-211ENST00000546411 BAMBIQ13145 260 aa14.13□□□□□ -0.15
CUX1-211ENST00000546411 EBPQ15125 230 aaKnown RBP14.13□□□□□ -0.15
CUX1-211ENST00000546411 SPEM1Q8N4L4 309 aa14.13□□□□□ -0.15
CUX1-211ENST00000546411 OR8B4Q96RC9 309 aa14.13□□□□□ -0.15
CUX1-211ENST00000546411 PAPOLGQ9BWT3 736 aaKnown RBP14.13□□□□□ -0.15
CUX1-211ENST00000546411 PPA2Q9H2U2 334 aa14.13□□□□□ -0.15
CUX1-211ENST00000546411 HRH4Q9H3N8 390 aa14.13□□□□□ -0.15
CUX1-211ENST00000546411 MN1Q10571 1320 aaPredicted RBP14.13□□□□□ -0.15
CUX1-211ENST00000546411 F8W036 122 aa14.13□□□□□ -0.15
CUX1-211ENST00000546411 RGS11O94810 467 aa14.13□□□□□ -0.15
CUX1-211ENST00000546411 EPPINO95925 133 aa14.13□□□□□ -0.15
CUX1-211ENST00000546411 CXCL3P19876 107 aa14.13□□□□□ -0.15
CUX1-211ENST00000546411 CX3CR1P49238 355 aa14.13□□□□□ -0.15
CUX1-211ENST00000546411 AKR1C2P52895 323 aa14.13□□□□□ -0.15
CUX1-211ENST00000546411 BLOC1S1P78537 153 aa14.13□□□□□ -0.15
CUX1-211ENST00000546411 AKR1C1Q04828 323 aa14.13□□□□□ -0.15
CUX1-211ENST00000546411 EGR3Q06889 387 aa14.13□□□□□ -0.15
CUX1-211ENST00000546411 LRFN5Q96NI6 719 aa14.13□□□□□ -0.15
CUX1-211ENST00000546411 CMSS1Q9BQ75 279 aaKnown RBP14.13□□□□□ -0.15
CUX1-211ENST00000546411 GSX2Q9BZM3 304 aa14.13□□□□□ -0.15
CUX1-211ENST00000546411 S1PR5Q9H228 398 aa14.13□□□□□ -0.15
CUX1-211ENST00000546411 CALHM2Q9HA72 323 aa14.13□□□□□ -0.15
CUX1-211ENST00000546411 MRM2Q9UI43 246 aaKnown RBP14.13□□□□□ -0.15
CUX1-211ENST00000546411 FAM221AA4D161 298 aa14.13□□□□□ -0.15
CUX1-211ENST00000546411 MRPL33O75394 65 aaKnown RBP14.13□□□□□ -0.15
CUX1-211ENST00000546411 DIRAS3O95661 229 aa14.13□□□□□ -0.15
CUX1-211ENST00000546411 LAP3P28838 519 aa14.13□□□□□ -0.15
CUX1-211ENST00000546411 FJX1Q86VR8 437 aa14.13□□□□□ -0.15
CUX1-211ENST00000546411 IFI44Q8TCB0 444 aa14.13□□□□□ -0.15
CUX1-211ENST00000546411 YIPF5Q969M3 257 aa14.13□□□□□ -0.15
CUX1-211ENST00000546411 MARVELD1Q9BSK0 173 aa14.13□□□□□ -0.15
CUX1-211ENST00000546411 PCDHGA5Q9Y5G8 931 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms