RNA–Protein interactions for RNA: ENST00000546276.5

NPC1L1-204, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 4,826 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-204ENST00000546276 Q6ZRG5 221 aa11.11□□□□□ -0.63
NPC1L1-204ENST00000546276 CCDC71Q8IV32 467 aaPredicted RBP11.11□□□□□ -0.63
NPC1L1-204ENST00000546276 CLEC1AQ8NC01 280 aa11.11□□□□□ -0.63
NPC1L1-204ENST00000546276 OR51E1Q8TCB6 317 aa11.11□□□□□ -0.63
NPC1L1-204ENST00000546276 SDSLQ96GA7 329 aa11.11□□□□□ -0.63
NPC1L1-204ENST00000546276 S1PR5Q9H228 398 aa11.11□□□□□ -0.63
NPC1L1-204ENST00000546276 MOB1AQ9H8S9 216 aa11.11□□□□□ -0.63
NPC1L1-204ENST00000546276 SLC52A3Q9NQ40 469 aa11.11□□□□□ -0.63
NPC1L1-204ENST00000546276 SDK1Q7Z5N4 2213 aa11.11□□□□□ -0.63
NPC1L1-204ENST00000546276 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.11□□□□□ -0.63
NPC1L1-204ENST00000546276 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.11□□□□□ -0.63
NPC1L1-204ENST00000546276 H0Y8X5 98 aa11.11□□□□□ -0.63
NPC1L1-204ENST00000546276 ZNF749O43361 778 aa11.11□□□□□ -0.63
NPC1L1-204ENST00000546276 AKR7A3O95154 331 aa11.11□□□□□ -0.63
NPC1L1-204ENST00000546276 CEACAM5P06731 702 aa11.11□□□□□ -0.63
NPC1L1-204ENST00000546276 CCR2P41597 374 aa11.11□□□□□ -0.63
NPC1L1-204ENST00000546276 HBG1P69891 147 aa11.11□□□□□ -0.63
NPC1L1-204ENST00000546276 HBG2P69892 147 aa11.11□□□□□ -0.63
NPC1L1-204ENST00000546276 AADACL3Q5VUY0 350 aa11.11□□□□□ -0.63
NPC1L1-204ENST00000546276 GJC3Q8NFK1 279 aa11.11□□□□□ -0.63
NPC1L1-204ENST00000546276 ADGRL4Q9HBW9 690 aa11.11□□□□□ -0.63
NPC1L1-204ENST00000546276 SIRT3Q9NTG7 399 aaPredicted RBP11.11□□□□□ -0.63
NPC1L1-204ENST00000546276 CHRNA9Q9UGM1 479 aa11.11□□□□□ -0.63
NPC1L1-204ENST00000546276 ING1Q9UK53 422 aaPredicted RBP11.11□□□□□ -0.63
NPC1L1-204ENST00000546276 TIMM8BQ9Y5J9 83 aaPredicted RBP11.11□□□□□ -0.63
NPC1L1-204ENST00000546276 A0A0B4J2E0 115 aa11.1□□□□□ -0.63
NPC1L1-204ENST00000546276 A0A1B0GX12 115 aa11.1□□□□□ -0.63
NPC1L1-204ENST00000546276 LEUTXA8MZ59 168 aa11.1□□□□□ -0.63
NPC1L1-204ENST00000546276 NME2P1O60361 137 aa11.1□□□□□ -0.63
NPC1L1-204ENST00000546276 HTD2P86397 168 aa11.1□□□□□ -0.63
NPC1L1-204ENST00000546276 TMEM217Q8N7C4 229 aa11.1□□□□□ -0.63
NPC1L1-204ENST00000546276 AMER3Q8N944 861 aa11.1□□□□□ -0.63
NPC1L1-204ENST00000546276 EXD3Q8N9H8 876 aa11.1□□□□□ -0.63
NPC1L1-204ENST00000546276 ZG16BQ96DA0 208 aa11.1□□□□□ -0.63
NPC1L1-204ENST00000546276 SPACA1Q9HBV2 294 aa11.1□□□□□ -0.63
NPC1L1-204ENST00000546276 NXT1Q9UKK6 140 aaKnown RBP11.1□□□□□ -0.63
NPC1L1-204ENST00000546276 PIGLQ9Y2B2 252 aa11.1□□□□□ -0.63
NPC1L1-204ENST00000546276 TP53TG5Q9Y2B4 290 aa11.1□□□□□ -0.63
NPC1L1-204ENST00000546276 TMEM184BQ9Y519 407 aaPredicted RBP11.1□□□□□ -0.63
NPC1L1-204ENST00000546276 S100A8P05109 93 aa11.1□□□□□ -0.63
NPC1L1-204ENST00000546276 FCGR2CP31995 323 aa11.1□□□□□ -0.63
NPC1L1-204ENST00000546276 APOBEC1P41238 236 aaKnown RBP11.1□□□□□ -0.63
NPC1L1-204ENST00000546276 PRAMEF20Q5VT98 475 aa11.1□□□□□ -0.63
NPC1L1-204ENST00000546276 C11orf87Q6NUJ2 197 aa11.1□□□□□ -0.63
NPC1L1-204ENST00000546276 UQCC3Q6UW78 93 aa11.1□□□□□ -0.63
NPC1L1-204ENST00000546276 C17orf47Q8NEP4 570 aa11.1□□□□□ -0.63
NPC1L1-204ENST00000546276 OR2G3Q8NGZ4 309 aa11.1□□□□□ -0.63
NPC1L1-204ENST00000546276 OR52N5Q8NH56 324 aa11.1□□□□□ -0.63
NPC1L1-204ENST00000546276 MARCH1Q8TCQ1 289 aa11.1□□□□□ -0.63
NPC1L1-204ENST00000546276 ZCCHC4Q9H5U6 513 aa11.1□□□□□ -0.63
NPC1L1-204ENST00000546276 CHST11Q9NPF2 352 aa11.1□□□□□ -0.63
NPC1L1-204ENST00000546276 CACNA1CQ13936 2221 aa11.1□□□□□ -0.63
NPC1L1-204ENST00000546276 CEBPZOSA8MTT3 80 aa11.1□□□□□ -0.63
NPC1L1-204ENST00000546276 STMND1H3BQB6 276 aa11.1□□□□□ -0.63
NPC1L1-204ENST00000546276 PTHLHP12272 177 aa11.1□□□□□ -0.63
NPC1L1-204ENST00000546276 EIF1P41567 113 aaKnown RBP11.1□□□□□ -0.63
NPC1L1-204ENST00000546276 EPHA4P54764 986 aa11.1□□□□□ -0.63
NPC1L1-204ENST00000546276 IKZF1Q13422 519 aa11.1□□□□□ -0.63
NPC1L1-204ENST00000546276 PRTGQ2VWP7 1150 aa11.1□□□□□ -0.63
NPC1L1-204ENST00000546276 CORO6Q6QEF8 472 aa11.1□□□□□ -0.63
NPC1L1-204ENST00000546276 C9orf62Q8N4C0 152 aa11.1□□□□□ -0.63
NPC1L1-204ENST00000546276 ANKRD9Q96BM1 317 aaPredicted RBP11.1□□□□□ -0.63
NPC1L1-204ENST00000546276 EMC6Q9BV81 110 aa11.1□□□□□ -0.63
NPC1L1-204ENST00000546276 TXNIPQ9H3M7 391 aa11.1□□□□□ -0.63
NPC1L1-204ENST00000546276 KLF15Q9UIH9 416 aa11.1□□□□□ -0.63
NPC1L1-204ENST00000546276 MCTS1Q9ULC4 181 aaKnown RBP11.1□□□□□ -0.63
NPC1L1-204ENST00000546276 PADI1Q9ULC6 663 aa11.1□□□□□ -0.63
NPC1L1-204ENST00000546276 PRELID3BQ9Y3B1 194 aa11.1□□□□□ -0.63
NPC1L1-204ENST00000546276 PCDHGA5Q9Y5G8 931 aa11.1□□□□□ -0.63
NPC1L1-204ENST00000546276 KIAA1217Q5T5P2 1943 aa11.1□□□□□ -0.63
NPC1L1-204ENST00000546276 LILRB5O75023 590 aa11.1□□□□□ -0.63
NPC1L1-204ENST00000546276 GNB3P16520 340 aa11.1□□□□□ -0.63
NPC1L1-204ENST00000546276 VEGFBP49765 207 aa11.1□□□□□ -0.63
NPC1L1-204ENST00000546276 BAMBIQ13145 260 aa11.1□□□□□ -0.63
NPC1L1-204ENST00000546276 SFRP5Q5T4F7 317 aa11.1□□□□□ -0.63
NPC1L1-204ENST00000546276 ABHD17BQ5VST6 288 aa11.1□□□□□ -0.63
NPC1L1-204ENST00000546276 AAED1Q7RTV5 226 aa11.1□□□□□ -0.63
NPC1L1-204ENST00000546276 SUMF1Q8NBK3 374 aa11.1□□□□□ -0.63
NPC1L1-204ENST00000546276 EMG1Q92979 244 aaKnown RBP11.1□□□□□ -0.63
NPC1L1-204ENST00000546276 ZNF775Q96BV0 537 aaPredicted RBP11.1□□□□□ -0.63
NPC1L1-204ENST00000546276 SEH1LQ96EE3 360 aa11.1□□□□□ -0.63
NPC1L1-204ENST00000546276 RNF212BA8MTL3 300 aa11.09□□□□□ -0.63
NPC1L1-204ENST00000546276 UMAD1C9J7I0 102 aa11.09□□□□□ -0.63
NPC1L1-204ENST00000546276 MSX1P28360 303 aa11.09□□□□□ -0.63
NPC1L1-204ENST00000546276 RPL12P30050 165 aaKnown RBP11.09□□□□□ -0.63
NPC1L1-204ENST00000546276 ZFP36L2P47974 494 aaKnown RBP11.09□□□□□ -0.63
NPC1L1-204ENST00000546276 SLC25A30Q5SVS4 291 aa11.09□□□□□ -0.63
NPC1L1-204ENST00000546276 FBXO46Q6PJ61 603 aaPredicted RBP11.09□□□□□ -0.63
NPC1L1-204ENST00000546276 PPP1R3BQ86XI6 285 aa11.09□□□□□ -0.63
NPC1L1-204ENST00000546276 PATE1Q8WXA2 126 aa11.09□□□□□ -0.63
NPC1L1-204ENST00000546276 WWTR1Q9GZV5 400 aa11.09□□□□□ -0.63
NPC1L1-204ENST00000546276 MTFP1Q9UDX5 166 aa11.09□□□□□ -0.63
NPC1L1-204ENST00000546276 A0A087WUJ7 227 aa11.09□□□□□ -0.63
NPC1L1-204ENST00000546276 EIF1BO60739 113 aaKnown RBP11.09□□□□□ -0.63
NPC1L1-204ENST00000546276 DUSP1P28562 367 aa11.09□□□□□ -0.63
NPC1L1-204ENST00000546276 BTG2P78543 158 aa11.09□□□□□ -0.63
NPC1L1-204ENST00000546276 C2orf50Q96LR7 162 aa11.09□□□□□ -0.63
NPC1L1-204ENST00000546276 FGF21Q9NSA1 209 aa11.09□□□□□ -0.63
NPC1L1-204ENST00000546276 SLC39A9Q9NUM3 307 aa11.09□□□□□ -0.63
NPC1L1-204ENST00000546276 C2orf72A6NCS6 295 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms