RNA–Protein interactions for RNA: ENST00000545440.5

SNHG1-223, Transcript of small nucleolar RNA host gene 1, human

TSL 2 BASIC

Gene SNHG1, Length 754 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SNHG1-223	ENST00000545440	PODNL1	Q6PEZ8	512 aa		6.58	□□□□□ -1.36
SNHG1-223	ENST00000545440	SLC25A47	Q6Q0C1	308 aa		6.58	□□□□□ -1.36
SNHG1-223	ENST00000545440	C16orf89	Q6UX73	402 aa		6.58	□□□□□ -1.36
SNHG1-223	ENST00000545440	RRM2B	Q7LG56	351 aa		6.58	□□□□□ -1.36
SNHG1-223	ENST00000545440	FAM122B	Q7Z309	247 aa		6.58	□□□□□ -1.36
SNHG1-223	ENST00000545440	PIGW	Q7Z7B1	504 aa		6.58	□□□□□ -1.36
SNHG1-223	ENST00000545440	IGFN1	Q86VF2	1251 aa		6.58	□□□□□ -1.36
SNHG1-223	ENST00000545440	LYSMD2	Q8IV50	215 aa		6.58	□□□□□ -1.36
SNHG1-223	ENST00000545440	LRRC18	Q8N456	261 aa		6.58	□□□□□ -1.36
SNHG1-223	ENST00000545440	PAQR4	Q8N4S7	273 aa	Predicted RBP	6.58	□□□□□ -1.36
SNHG1-223	ENST00000545440	RNF148	Q8N7C7	305 aa		6.58	□□□□□ -1.36
SNHG1-223	ENST00000545440	FAM86B1	Q8N7N1	296 aa		6.58	□□□□□ -1.36
SNHG1-223	ENST00000545440	ARIH2OS	Q8N7S6	290 aa		6.58	□□□□□ -1.36
SNHG1-223	ENST00000545440	NSMAF	Q92636	917 aa		6.58	□□□□□ -1.36
SNHG1-223	ENST00000545440	C7orf34	Q96L11	122 aa		6.58	□□□□□ -1.36
SNHG1-223	ENST00000545440	RBP7	Q96R05	134 aa		6.58	□□□□□ -1.36
SNHG1-223	ENST00000545440	GPX7	Q96SL4	187 aa	Predicted RBP	6.58	□□□□□ -1.36
SNHG1-223	ENST00000545440	WAC	Q9BTA9	647 aa		6.58	□□□□□ -1.36
SNHG1-223	ENST00000545440	BCL2L14	Q9BZR8	327 aa		6.58	□□□□□ -1.36
SNHG1-223	ENST00000545440	BPESC1	Q9GZL8	116 aa		6.58	□□□□□ -1.36
SNHG1-223	ENST00000545440	LRMDA	Q9H2I8	198 aa		6.58	□□□□□ -1.36
SNHG1-223	ENST00000545440	RNF121	Q9H920	327 aa		6.58	□□□□□ -1.36
SNHG1-223	ENST00000545440	CCNB1IP1	Q9NPC3	277 aa		6.58	□□□□□ -1.36
SNHG1-223	ENST00000545440	TMEM160	Q9NX00	188 aa		6.58	□□□□□ -1.36
SNHG1-223	ENST00000545440	ZNF346	Q9UL40	294 aa	Known RBP	6.58	□□□□□ -1.36
SNHG1-223	ENST00000545440	IGLV3-9	A0A075B6K5	115 aa		6.57	□□□□□ -1.36
SNHG1-223	ENST00000545440	TRBV4-1	A0A0J9YWV2	114 aa		6.57	□□□□□ -1.36
SNHG1-223	ENST00000545440		A0A1W2PPW3	197 aa		6.57	□□□□□ -1.36
SNHG1-223	ENST00000545440	SH3PXD2B	A1X283	911 aa		6.57	□□□□□ -1.36
SNHG1-223	ENST00000545440	XKRY	O14609	159 aa		6.57	□□□□□ -1.36
SNHG1-223	ENST00000545440	ARPC2	O15144	300 aa		6.57	□□□□□ -1.36
SNHG1-223	ENST00000545440	NDUFB2	O95178	105 aa		6.57	□□□□□ -1.36
SNHG1-223	ENST00000545440	GAST	P01350	101 aa		6.57	□□□□□ -1.36
SNHG1-223	ENST00000545440	ADRA2A	P08913	450 aa		6.57	□□□□□ -1.36
SNHG1-223	ENST00000545440	CST2	P09228	141 aa		6.57	□□□□□ -1.36
SNHG1-223	ENST00000545440	IGHV4-31	P0DP07	118 aa		6.57	□□□□□ -1.36
SNHG1-223	ENST00000545440	GAA	P10253	952 aa		6.57	□□□□□ -1.36
SNHG1-223	ENST00000545440	GYPE	P15421	78 aa		6.57	□□□□□ -1.36
SNHG1-223	ENST00000545440	ZNF250	P15622	560 aa		6.57	□□□□□ -1.36
SNHG1-223	ENST00000545440	ZNF23	P17027	643 aa		6.57	□□□□□ -1.36
SNHG1-223	ENST00000545440	ZNF26	P17031	533 aa	Predicted RBP	6.57	□□□□□ -1.36
SNHG1-223	ENST00000545440	ZNF32	P17041	273 aa		6.57	□□□□□ -1.36
SNHG1-223	ENST00000545440	TCN1	P20061	433 aa	Predicted RBP	6.57	□□□□□ -1.36
SNHG1-223	ENST00000545440	MSR1	P21757	451 aa		6.57	□□□□□ -1.36
SNHG1-223	ENST00000545440	STOM	P27105	288 aa		6.57	□□□□□ -1.36
SNHG1-223	ENST00000545440	CDA	P32320	146 aa		6.57	□□□□□ -1.36
SNHG1-223	ENST00000545440	APLNR	P35414	380 aa		6.57	□□□□□ -1.36
SNHG1-223	ENST00000545440	RPL4	P36578	427 aa	Known RBP	6.57	□□□□□ -1.36
SNHG1-223	ENST00000545440	GUCA1A	P43080	201 aa	Predicted RBP	6.57	□□□□□ -1.36
SNHG1-223	ENST00000545440	RAD52	P43351	418 aa		6.57	□□□□□ -1.36
SNHG1-223	ENST00000545440	OMP	P47874	163 aa		6.57	□□□□□ -1.36
SNHG1-223	ENST00000545440	GZMK	P49863	264 aa		6.57	□□□□□ -1.36
SNHG1-223	ENST00000545440	MNAT1	P51948	309 aa		6.57	□□□□□ -1.36
SNHG1-223	ENST00000545440	KLF3	P57682	345 aa	Predicted RBP	6.57	□□□□□ -1.36
SNHG1-223	ENST00000545440	PCBD1	P61457	104 aa		6.57	□□□□□ -1.36
SNHG1-223	ENST00000545440	KRR1	Q13601	381 aa	Known RBP	6.57	□□□□□ -1.36
SNHG1-223	ENST00000545440	GGTLC2	Q14390	218 aa		6.57	□□□□□ -1.36
SNHG1-223	ENST00000545440	KRT72	Q14CN4	511 aa		6.57	□□□□□ -1.36
SNHG1-223	ENST00000545440	IQCC	Q4KMZ1	466 aa		6.57	□□□□□ -1.36
SNHG1-223	ENST00000545440	MEST	Q5EB52	335 aa		6.57	□□□□□ -1.36
SNHG1-223	ENST00000545440	XP32	Q5T750	250 aa		6.57	□□□□□ -1.36
SNHG1-223	ENST00000545440	GPR139	Q6DWJ6	353 aa		6.57	□□□□□ -1.36
SNHG1-223	ENST00000545440	TBPL2	Q6SJ96	375 aa		6.57	□□□□□ -1.36
SNHG1-223	ENST00000545440	UNQ6126/PRO20091	Q6UXV3	157 aa		6.57	□□□□□ -1.36
SNHG1-223	ENST00000545440	ADCK1	Q86TW2	530 aa		6.57	□□□□□ -1.36
SNHG1-223	ENST00000545440	MEX3D	Q86XN8	651 aa	Known RBP	6.57	□□□□□ -1.36
SNHG1-223	ENST00000545440	PRIMA1	Q86XR5	153 aa		6.57	□□□□□ -1.36
SNHG1-223	ENST00000545440	HIPK1	Q86Z02	1210 aa		6.57	□□□□□ -1.36
SNHG1-223	ENST00000545440	C1orf174	Q8IYL3	243 aa		6.57	□□□□□ -1.36
SNHG1-223	ENST00000545440	ZNF786	Q8N393	782 aa		6.57	□□□□□ -1.36
SNHG1-223	ENST00000545440	CLDN22	Q8N7P3	220 aa		6.57	□□□□□ -1.36
SNHG1-223	ENST00000545440	SNX33	Q8WV41	574 aa		6.57	□□□□□ -1.36
SNHG1-223	ENST00000545440	NRG4	Q8WWG1	115 aa		6.57	□□□□□ -1.36
SNHG1-223	ENST00000545440	PYURF	Q96I23	114 aa		6.57	□□□□□ -1.36
SNHG1-223	ENST00000545440	RSRC1	Q96IZ7	334 aa	Known RBP	6.57	□□□□□ -1.36
SNHG1-223	ENST00000545440	NSMCE2	Q96MF7	247 aa		6.57	□□□□□ -1.36
SNHG1-223	ENST00000545440	ZNF570	Q96NI8	536 aa		6.57	□□□□□ -1.36
SNHG1-223	ENST00000545440	FUZ	Q9BT04	418 aa		6.57	□□□□□ -1.36
SNHG1-223	ENST00000545440	OR2H1	Q9GZK4	316 aa		6.57	□□□□□ -1.36
SNHG1-223	ENST00000545440	YAE1D1	Q9NRH1	226 aa		6.57	□□□□□ -1.36
SNHG1-223	ENST00000545440	ARL8B	Q9NVJ2	186 aa		6.57	□□□□□ -1.36
SNHG1-223	ENST00000545440	MYEF2	Q9P2K5	600 aa	Known RBP	6.57	□□□□□ -1.36
SNHG1-223	ENST00000545440	GRHPR	Q9UBQ7	328 aa		6.57	□□□□□ -1.36
SNHG1-223	ENST00000545440	CD300A	Q9UGN4	299 aa		6.57	□□□□□ -1.36
SNHG1-223	ENST00000545440	SIGLEC7	Q9Y286	467 aa		6.57	□□□□□ -1.36
SNHG1-223	ENST00000545440	ADAM18	Q9Y3Q7	739 aa		6.57	□□□□□ -1.36
SNHG1-223	ENST00000545440	IGHV4-61	A0A0C4DH41	118 aa		6.56	□□□□□ -1.36
SNHG1-223	ENST00000545440	TEX13C	A0A0J9YWL9	993 aa		6.56	□□□□□ -1.36
SNHG1-223	ENST00000545440		A0A1W2PPL8	197 aa		6.56	□□□□□ -1.36
SNHG1-223	ENST00000545440	PRSS37	A4D1T9	235 aa		6.56	□□□□□ -1.36
SNHG1-223	ENST00000545440	C12orf71	A8MTZ7	269 aa		6.56	□□□□□ -1.36
SNHG1-223	ENST00000545440		H3BSA7	217 aa		6.56	□□□□□ -1.36
SNHG1-223	ENST00000545440		H7C1C5	153 aa		6.56	□□□□□ -1.36
SNHG1-223	ENST00000545440	DIRAS1	O95057	198 aa		6.56	□□□□□ -1.36
SNHG1-223	ENST00000545440	STAMBP	O95630	424 aa		6.56	□□□□□ -1.36
SNHG1-223	ENST00000545440	LCK	P06239	509 aa		6.56	□□□□□ -1.36
SNHG1-223	ENST00000545440	TACSTD2	P09758	323 aa		6.56	□□□□□ -1.36
SNHG1-223	ENST00000545440	CCL2	P13500	99 aa		6.56	□□□□□ -1.36
SNHG1-223	ENST00000545440	APEH	P13798	732 aa	Known RBP	6.56	□□□□□ -1.36
SNHG1-223	ENST00000545440	ACHE	P22303	614 aa		6.56	□□□□□ -1.36

Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms