RNA–Protein interactions for RNA: ENST00000544910.5

VPS50-220, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2 BASIC

Gene VPS50, Length 5,736 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-220ENST00000544910 F5H5K5 113 aa5.24□□□□□ -1.57
VPS50-220ENST00000544910 PTP4A3O75365 173 aa5.24□□□□□ -1.57
VPS50-220ENST00000544910 HBE1P02100 147 aa5.24□□□□□ -1.57
VPS50-220ENST00000544910 WNT1P04628 370 aa5.24□□□□□ -1.57
VPS50-220ENST00000544910 CNR1P21554 472 aa5.24□□□□□ -1.57
VPS50-220ENST00000544910 CXADRP78310 365 aa5.24□□□□□ -1.57
VPS50-220ENST00000544910 SSBP1Q04837 148 aaKnown RBP5.24□□□□□ -1.57
VPS50-220ENST00000544910 FAAP20Q6NZ36 180 aa5.24□□□□□ -1.57
VPS50-220ENST00000544910 COX15Q7KZN9 410 aa5.24□□□□□ -1.57
VPS50-220ENST00000544910 PRSS42Q7Z5A4 293 aa5.24□□□□□ -1.57
VPS50-220ENST00000544910 FJX1Q86VR8 437 aa5.24□□□□□ -1.57
VPS50-220ENST00000544910 FAM181AQ8N9Y4 354 aa5.24□□□□□ -1.57
VPS50-220ENST00000544910 OR2G2Q8NGZ5 317 aa5.24□□□□□ -1.57
VPS50-220ENST00000544910 OTOSQ8NHW6 89 aa5.24□□□□□ -1.57
VPS50-220ENST00000544910 PHF7Q9BWX1 381 aaPredicted RBP5.24□□□□□ -1.57
VPS50-220ENST00000544910 ZNF629Q9UEG4 869 aaPredicted RBP5.24□□□□□ -1.57
VPS50-220ENST00000544910 CGGBP1Q9UFW8 167 aaPredicted RBP5.24□□□□□ -1.57
VPS50-220ENST00000544910 MRPS28Q9Y2Q9 187 aaKnown RBP5.24□□□□□ -1.57
VPS50-220ENST00000544910 UBE2J1Q9Y385 318 aaPredicted RBP5.24□□□□□ -1.57
VPS50-220ENST00000544910 SNRPGP15A8MWD9 76 aa5.24□□□□□ -1.57
VPS50-220ENST00000544910 ARPC3O15145 178 aa5.24□□□□□ -1.57
VPS50-220ENST00000544910 XRCC3O43542 346 aa5.24□□□□□ -1.57
VPS50-220ENST00000544910 AKR7A3O95154 331 aa5.24□□□□□ -1.57
VPS50-220ENST00000544910 OTX2P32243 289 aa5.24□□□□□ -1.57
VPS50-220ENST00000544910 GABREP78334 506 aa5.24□□□□□ -1.57
VPS50-220ENST00000544910 GAB4Q2WGN9 574 aa5.24□□□□□ -1.57
VPS50-220ENST00000544910 CLLU1Q5K131 121 aa5.24□□□□□ -1.57
VPS50-220ENST00000544910 FHL5Q5TD97 284 aa5.24□□□□□ -1.57
VPS50-220ENST00000544910 TMEM164Q5U3C3 297 aa5.24□□□□□ -1.57
VPS50-220ENST00000544910 NPSR1Q6W5P4 371 aa5.24□□□□□ -1.57
VPS50-220ENST00000544910 Q6ZTK2 550 aa5.24□□□□□ -1.57
VPS50-220ENST00000544910 ZNF561Q8N587 486 aa5.24□□□□□ -1.57
VPS50-220ENST00000544910 OR56B1Q8NGI3 324 aa5.24□□□□□ -1.57
VPS50-220ENST00000544910 FRZBQ92765 325 aa5.24□□□□□ -1.57
VPS50-220ENST00000544910 SIGLEC11Q96RL6 698 aa5.24□□□□□ -1.57
VPS50-220ENST00000544910 SAMD10Q9BYL1 202 aa5.24□□□□□ -1.57
VPS50-220ENST00000544910 TGIF2Q9GZN2 237 aa5.24□□□□□ -1.57
VPS50-220ENST00000544910 FAM60AQ9NP50 221 aa5.24□□□□□ -1.57
VPS50-220ENST00000544910 B4GALT7Q9UBV7 327 aa5.24□□□□□ -1.57
VPS50-220ENST00000544910 ZNF175Q9Y473 711 aa5.24□□□□□ -1.57
VPS50-220ENST00000544910 GBF1Q92538 1859 aa5.23□□□□□ -1.57
VPS50-220ENST00000544910 A0A0A6YYH2 397 aa5.23□□□□□ -1.57
VPS50-220ENST00000544910 A6NJ64 397 aa5.23□□□□□ -1.57
VPS50-220ENST00000544910 METTL12A8MUP2 240 aa5.23□□□□□ -1.57
VPS50-220ENST00000544910 PLA2G10O15496 165 aa5.23□□□□□ -1.57
VPS50-220ENST00000544910 LAMTOR5O43504 91 aa5.23□□□□□ -1.57
VPS50-220ENST00000544910 RGS11O94810 467 aa5.23□□□□□ -1.57
VPS50-220ENST00000544910 ZGLP1P0C6A0 271 aa5.23□□□□□ -1.57
VPS50-220ENST00000544910 CCNOP22674 350 aa5.23□□□□□ -1.57
VPS50-220ENST00000544910 TAS2R46P59540 309 aa5.23□□□□□ -1.57
VPS50-220ENST00000544910 GRB2P62993 217 aaKnown RBP5.23□□□□□ -1.57
VPS50-220ENST00000544910 C2orf76Q3KRA6 126 aa5.23□□□□□ -1.57
VPS50-220ENST00000544910 H3F3CQ6NXT2 135 aa5.23□□□□□ -1.57
VPS50-220ENST00000544910 OPN5Q6U736 354 aa5.23□□□□□ -1.57
VPS50-220ENST00000544910 ZAR1Q86SH2 424 aa5.23□□□□□ -1.57
VPS50-220ENST00000544910 BPHLQ86WA6 291 aaPredicted RBP5.23□□□□□ -1.57
VPS50-220ENST00000544910 CDC20BQ86Y33 519 aa5.23□□□□□ -1.57
VPS50-220ENST00000544910 GABRG1Q8N1C3 465 aa5.23□□□□□ -1.57
VPS50-220ENST00000544910 ZNF680Q8NEM1 530 aa5.23□□□□□ -1.57
VPS50-220ENST00000544910 LFNGQ8NES3 379 aa5.23□□□□□ -1.57
VPS50-220ENST00000544910 SLC30A7Q8NEW0 376 aa5.23□□□□□ -1.57
VPS50-220ENST00000544910 OR56B2PQ8NGI1 322 aa5.23□□□□□ -1.57
VPS50-220ENST00000544910 OR52H1Q8NGJ2 320 aa5.23□□□□□ -1.57
VPS50-220ENST00000544910 OR1N1Q8NGS0 311 aa5.23□□□□□ -1.57
VPS50-220ENST00000544910 PTP4A1Q93096 173 aa5.23□□□□□ -1.57
VPS50-220ENST00000544910 MAP6Q96JE9 813 aa5.23□□□□□ -1.57
VPS50-220ENST00000544910 MENTQ9BUN1 341 aa5.23□□□□□ -1.57
VPS50-220ENST00000544910 OPA3Q9H6K4 179 aa5.23□□□□□ -1.57
VPS50-220ENST00000544910 NTMQ9P121 344 aa5.23□□□□□ -1.57
VPS50-220ENST00000544910 ST6GALNAC2Q9UJ37 374 aa5.23□□□□□ -1.57
VPS50-220ENST00000544910 ICAM5Q9UMF0 924 aa5.23□□□□□ -1.57
VPS50-220ENST00000544910 A0A087WZY1 265 aa5.23□□□□□ -1.57
VPS50-220ENST00000544910 DFFBO76075 338 aa5.23□□□□□ -1.57
VPS50-220ENST00000544910 MT-CO2P00403 227 aa5.23□□□□□ -1.57
VPS50-220ENST00000544910 IFI6P09912 130 aa5.23□□□□□ -1.57
VPS50-220ENST00000544910 TMEM225BP0DP42 221 aa5.23□□□□□ -1.57
VPS50-220ENST00000544910 SERPINA2P20848 420 aa5.23□□□□□ -1.57
VPS50-220ENST00000544910 HOXC12P31275 282 aa5.23□□□□□ -1.57
VPS50-220ENST00000544910 EIF1P41567 113 aaKnown RBP5.23□□□□□ -1.57
VPS50-220ENST00000544910 CDKN2AP42771 156 aaKnown RBP5.23□□□□□ -1.57
VPS50-220ENST00000544910 RAB1AP62820 205 aa5.23□□□□□ -1.57
VPS50-220ENST00000544910 PLA2G7Q13093 441 aa5.23□□□□□ -1.57
VPS50-220ENST00000544910 GSG1Q2KHT4 349 aa5.23□□□□□ -1.57
VPS50-220ENST00000544910 TMEM176BQ3YBM2 270 aaPredicted RBP5.23□□□□□ -1.57
VPS50-220ENST00000544910 ZBTB37Q5TC79 503 aa5.23□□□□□ -1.57
VPS50-220ENST00000544910 GLDNQ6ZMI3 551 aaPredicted RBP5.23□□□□□ -1.57
VPS50-220ENST00000544910 DGAT2L6Q6ZPD8 337 aa5.23□□□□□ -1.57
VPS50-220ENST00000544910 SKA3Q8IX90 412 aa5.23□□□□□ -1.57
VPS50-220ENST00000544910 BOLLQ8N9W6 283 aaKnown RBP5.23□□□□□ -1.57
VPS50-220ENST00000544910 OR13C9Q8NGT0 318 aa5.23□□□□□ -1.57
VPS50-220ENST00000544910 OR52N5Q8NH56 324 aa5.23□□□□□ -1.57
VPS50-220ENST00000544910 NAT6Q93015 286 aa5.23□□□□□ -1.57
VPS50-220ENST00000544910 SFXN2Q96NB2 322 aa5.23□□□□□ -1.57
VPS50-220ENST00000544910 OR11A1Q9GZK7 315 aa5.23□□□□□ -1.57
VPS50-220ENST00000544910 MOB1AQ9H8S9 216 aa5.23□□□□□ -1.57
VPS50-220ENST00000544910 VSX1Q9NZR4 365 aaPredicted RBP5.23□□□□□ -1.57
VPS50-220ENST00000544910 NXT1Q9UKK6 140 aaKnown RBP5.23□□□□□ -1.57
VPS50-220ENST00000544910 IGHV5-51A0A0C4DH38 117 aa5.23□□□□□ -1.57
VPS50-220ENST00000544910 IGKV1D-16P01601 117 aa5.23□□□□□ -1.57
VPS50-220ENST00000544910 HRGP04196 525 aa5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms