RNA–Protein interactions for RNA: ENST00000544552.5

PAAF1-214, Transcript of proteasomal ATPase associated factor 1, humanhuman

TSL 1 (best) BASIC

Gene PAAF1, Length 1,612 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1-214ENST00000544552 SCN1BQ07699 218 aa11.27□□□□□ -0.6
PAAF1-214ENST00000544552 BAK1Q16611 211 aa11.27□□□□□ -0.6
PAAF1-214ENST00000544552 PHYHD1Q5SRE7 291 aa11.27□□□□□ -0.6
PAAF1-214ENST00000544552 RIPPLY2Q5TAB7 128 aa11.27□□□□□ -0.6
PAAF1-214ENST00000544552 FCRLAQ7L513 359 aa11.27□□□□□ -0.6
PAAF1-214ENST00000544552 SAMD12Q8N8I0 201 aa11.27□□□□□ -0.6
PAAF1-214ENST00000544552 OR10AC1Q8NH08 325 aa11.27□□□□□ -0.6
PAAF1-214ENST00000544552 TRMT10AQ8TBZ6 339 aaKnown RBP11.27□□□□□ -0.6
PAAF1-214ENST00000544552 ASB5Q8WWX0 329 aa11.27□□□□□ -0.6
PAAF1-214ENST00000544552 TMEM45BQ96B21 275 aa11.27□□□□□ -0.6
PAAF1-214ENST00000544552 GFI1Q99684 422 aa11.27□□□□□ -0.6
PAAF1-214ENST00000544552 EMC7Q9NPA0 242 aa11.27□□□□□ -0.6
PAAF1-214ENST00000544552 FAM206AQ9NX38 181 aa11.27□□□□□ -0.6
PAAF1-214ENST00000544552 FBXL3Q9UKT7 428 aa11.27□□□□□ -0.6
PAAF1-214ENST00000544552 HHLA2Q9UM44 414 aa11.27□□□□□ -0.6
PAAF1-214ENST00000544552 FOXJ3Q9UPW0 622 aa11.27□□□□□ -0.6
PAAF1-214ENST00000544552 POLR1DQ9Y2S0 133 aa11.27□□□□□ -0.6
PAAF1-214ENST00000544552 EMC9Q9Y3B6 208 aa11.27□□□□□ -0.6
PAAF1-214ENST00000544552 PHF3Q92576 2039 aaKnown RBP11.27□□□□□ -0.6
PAAF1-214ENST00000544552 FAM25AB3EWG3 89 aa11.27□□□□□ -0.61
PAAF1-214ENST00000544552 FAM25CB3EWG5 89 aa11.27□□□□□ -0.61
PAAF1-214ENST00000544552 FAM25GB3EWG6 89 aa11.27□□□□□ -0.61
PAAF1-214ENST00000544552 PAHP00439 452 aa11.27□□□□□ -0.61
PAAF1-214ENST00000544552 HLA-DQB1P01920 261 aa11.27□□□□□ -0.61
PAAF1-214ENST00000544552 CD2P06729 351 aa11.27□□□□□ -0.61
PAAF1-214ENST00000544552 CELA3AP09093 270 aa11.27□□□□□ -0.61
PAAF1-214ENST00000544552 UBCP0CG48 685 aaKnown RBP11.27□□□□□ -0.61
PAAF1-214ENST00000544552 CD37P11049 281 aa11.27□□□□□ -0.61
PAAF1-214ENST00000544552 SPINK2P20155 84 aa11.27□□□□□ -0.61
PAAF1-214ENST00000544552 ZNF84P51523 738 aa11.27□□□□□ -0.61
PAAF1-214ENST00000544552 SCAND1P57086 179 aa11.27□□□□□ -0.61
PAAF1-214ENST00000544552 PPIAP62937 165 aaKnown RBP11.27□□□□□ -0.61
PAAF1-214ENST00000544552 HIST1H3AP68431 136 aa11.27□□□□□ -0.61
PAAF1-214ENST00000544552 MRPS34P82930 218 aaKnown RBP11.27□□□□□ -0.61
PAAF1-214ENST00000544552 SLC10A1Q14973 349 aa11.27□□□□□ -0.61
PAAF1-214ENST00000544552 PYDC2Q56P42 97 aa11.27□□□□□ -0.61
PAAF1-214ENST00000544552 ZNF766Q5HY98 468 aa11.27□□□□□ -0.61
PAAF1-214ENST00000544552 HIST2H3PS2Q5TEC6 136 aa11.27□□□□□ -0.61
PAAF1-214ENST00000544552 FAM27BQ5VT28 67 aa11.27□□□□□ -0.61
PAAF1-214ENST00000544552 CFAP77Q6ZQR2 320 aa11.27□□□□□ -0.61
PAAF1-214ENST00000544552 HIST2H3AQ71DI3 136 aa11.27□□□□□ -0.61
PAAF1-214ENST00000544552 AAED1Q7RTV5 226 aa11.27□□□□□ -0.61
PAAF1-214ENST00000544552 ELMOD2Q8IZ81 293 aa11.27□□□□□ -0.61
PAAF1-214ENST00000544552 FAM109AQ8N4B1 249 aa11.27□□□□□ -0.61
PAAF1-214ENST00000544552 MEIOBQ8N635 442 aa11.27□□□□□ -0.61
PAAF1-214ENST00000544552 OR51A4Q8NGJ6 313 aa11.27□□□□□ -0.61
PAAF1-214ENST00000544552 ROBO4Q8WZ75 1007 aa11.27□□□□□ -0.61
PAAF1-214ENST00000544552 ULBP2Q9BZM5 246 aa11.27□□□□□ -0.61
PAAF1-214ENST00000544552 MOB1AQ9H8S9 216 aa11.27□□□□□ -0.61
PAAF1-214ENST00000544552 PNRC2Q9NPJ4 139 aaKnown RBP11.27□□□□□ -0.61
PAAF1-214ENST00000544552 C14orf119Q9NWQ9 140 aa11.27□□□□□ -0.61
PAAF1-214ENST00000544552 RABL2AQ9UBK7 228 aaPredicted RBP11.27□□□□□ -0.61
PAAF1-214ENST00000544552 ASH2LQ9UBL3 628 aa11.27□□□□□ -0.61
PAAF1-214ENST00000544552 RABL2BQ9UNT1 228 aa11.27□□□□□ -0.61
PAAF1-214ENST00000544552 ZNF891A8MT65 544 aaPredicted RBP11.26□□□□□ -0.61
PAAF1-214ENST00000544552 FAM166BA8MTA8 275 aa11.26□□□□□ -0.61
PAAF1-214ENST00000544552 ACOT7O00154 380 aa11.26□□□□□ -0.61
PAAF1-214ENST00000544552 MAGEB3O15480 346 aa11.26□□□□□ -0.61
PAAF1-214ENST00000544552 EIF4EP06730 217 aaKnown RBP11.26□□□□□ -0.61
PAAF1-214ENST00000544552 CSF3P09919 207 aa11.26□□□□□ -0.61
PAAF1-214ENST00000544552 CALCBP10092 127 aa11.26□□□□□ -0.61
PAAF1-214ENST00000544552 PRKAR1AP10644 381 aa11.26□□□□□ -0.61
PAAF1-214ENST00000544552 ADRA2CP18825 462 aa11.26□□□□□ -0.61
PAAF1-214ENST00000544552 WT1P19544 449 aaPredicted RBP11.26□□□□□ -0.61
PAAF1-214ENST00000544552 FSTP19883 344 aa11.26□□□□□ -0.61
PAAF1-214ENST00000544552 RFC3P40938 356 aa11.26□□□□□ -0.61
PAAF1-214ENST00000544552 TNFSF10P50591 281 aa11.26□□□□□ -0.61
PAAF1-214ENST00000544552 GRB2P62993 217 aaKnown RBP11.26□□□□□ -0.61
PAAF1-214ENST00000544552 SRSF6Q13247 344 aaKnown RBP11.26□□□□□ -0.61
PAAF1-214ENST00000544552 CLN3Q13286 438 aa11.26□□□□□ -0.61
PAAF1-214ENST00000544552 SGCAQ16586 387 aa11.26□□□□□ -0.61
PAAF1-214ENST00000544552 GJC3Q8NFK1 279 aa11.26□□□□□ -0.61
PAAF1-214ENST00000544552 CPT1CQ8TCG5 803 aa11.26□□□□□ -0.61
PAAF1-214ENST00000544552 TSEN15Q8WW01 171 aaKnown RBP11.26□□□□□ -0.61
PAAF1-214ENST00000544552 ABTB1Q969K4 478 aaPredicted RBP11.26□□□□□ -0.61
PAAF1-214ENST00000544552 PPP1R14AQ96A00 147 aa11.26□□□□□ -0.61
PAAF1-214ENST00000544552 NABP1Q96AH0 204 aa11.26□□□□□ -0.61
PAAF1-214ENST00000544552 PPP1R14BQ96C90 147 aa11.26□□□□□ -0.61
PAAF1-214ENST00000544552 ORAI1Q96D31 301 aa11.26□□□□□ -0.61
PAAF1-214ENST00000544552 ZNF416Q9BWM5 594 aa11.26□□□□□ -0.61
PAAF1-214ENST00000544552 RNF122Q9H9V4 155 aa11.26□□□□□ -0.61
PAAF1-214ENST00000544552 BRD7Q9NPI1 651 aa11.26□□□□□ -0.61
PAAF1-214ENST00000544552 DDX28Q9NUL7 540 aaKnown RBP11.26□□□□□ -0.61
PAAF1-214ENST00000544552 EXTL2Q9UBQ6 330 aa11.26□□□□□ -0.61
PAAF1-214ENST00000544552 NUFIP1Q9UHK0 495 aaKnown RBP11.26□□□□□ -0.61
PAAF1-214ENST00000544552 GTF2A1LQ9UNN4 478 aa11.26□□□□□ -0.61
PAAF1-214ENST00000544552 DHDHQ9UQ10 334 aa11.26□□□□□ -0.61
PAAF1-214ENST00000544552 NCOA6Q14686 2063 aaPredicted RBP11.26□□□□□ -0.61
PAAF1-214ENST00000544552 CFAP54Q96N23 3096 aa11.26□□□□□ -0.61
PAAF1-214ENST00000544552 hCG_2014768A0A024R1R8 64 aa11.25□□□□□ -0.61
PAAF1-214ENST00000544552 TRAV8-7A0A075B6U6 113 aa11.25□□□□□ -0.61
PAAF1-214ENST00000544552 MEGF11A6BM72 1044 aa11.25□□□□□ -0.61
PAAF1-214ENST00000544552 TTRP02766 147 aa11.25□□□□□ -0.61
PAAF1-214ENST00000544552 NTF4P34130 210 aa11.25□□□□□ -0.61
PAAF1-214ENST00000544552 NR4A2P43354 598 aa11.25□□□□□ -0.61
PAAF1-214ENST00000544552 PITPNBP48739 271 aa11.25□□□□□ -0.61
PAAF1-214ENST00000544552 CCL11P51671 97 aa11.25□□□□□ -0.61
PAAF1-214ENST00000544552 PSMA6P60900 246 aaKnown RBP11.25□□□□□ -0.61
PAAF1-214ENST00000544552 IL18Q14116 193 aa11.25□□□□□ -0.61
PAAF1-214ENST00000544552 ENDOGQ14249 297 aaKnown RBP11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms