RNA–Protein interactions for RNA: ENST00000544474.5

PDZD4-209, Transcript of PDZ domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene PDZD4, Length 3,418 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD4-209ENST00000544474 ACKR3P25106 362 aa11.61□□□□□ -0.55
PDZD4-209ENST00000544474 CD1CP29017 333 aa11.61□□□□□ -0.55
PDZD4-209ENST00000544474 SMAD4Q13485 552 aaKnown RBP11.61□□□□□ -0.55
PDZD4-209ENST00000544474 TMEM244Q5VVB8 128 aa11.61□□□□□ -0.55
PDZD4-209ENST00000544474 PRAMEF8Q5VWM4 474 aa11.61□□□□□ -0.55
PDZD4-209ENST00000544474 PRAMEF7Q5VXH5 474 aa11.61□□□□□ -0.55
PDZD4-209ENST00000544474 ENPP7Q6UWV6 458 aa11.61□□□□□ -0.55
PDZD4-209ENST00000544474 OR6X1Q8NH79 312 aa11.61□□□□□ -0.55
PDZD4-209ENST00000544474 NPRL2Q8WTW4 380 aa11.61□□□□□ -0.55
PDZD4-209ENST00000544474 RIMS4Q9H426 269 aaPredicted RBP11.61□□□□□ -0.55
PDZD4-209ENST00000544474 PLEKHA1Q9HB21 404 aa11.61□□□□□ -0.55
PDZD4-209ENST00000544474 STEAP1Q9UHE8 339 aa11.61□□□□□ -0.55
PDZD4-209ENST00000544474 TMED7Q9Y3B3 224 aa11.61□□□□□ -0.55
PDZD4-209ENST00000544474 TRPM6Q9BX84 2022 aa11.6□□□□□ -0.55
PDZD4-209ENST00000544474 COL4A6Q14031 1691 aa11.6□□□□□ -0.55
PDZD4-209ENST00000544474 ZNF25P17030 456 aaPredicted RBP11.6□□□□□ -0.55
PDZD4-209ENST00000544474 C5AR1P21730 350 aa11.6□□□□□ -0.55
PDZD4-209ENST00000544474 TSFMP43897 325 aaKnown RBP11.6□□□□□ -0.55
PDZD4-209ENST00000544474 NPY4RP50391 375 aa11.6□□□□□ -0.55
PDZD4-209ENST00000544474 C2orf76Q3KRA6 126 aa11.6□□□□□ -0.55
PDZD4-209ENST00000544474 RNASE10Q5GAN6 216 aaKnown RBP11.6□□□□□ -0.55
PDZD4-209ENST00000544474 PRSS41Q7RTY9 318 aa11.6□□□□□ -0.55
PDZD4-209ENST00000544474 GPBAR1Q8TDU6 330 aa11.6□□□□□ -0.55
PDZD4-209ENST00000544474 KISS1RQ969F8 398 aaPredicted RBP11.6□□□□□ -0.55
PDZD4-209ENST00000544474 ARRDC3Q96B67 414 aa11.6□□□□□ -0.55
PDZD4-209ENST00000544474 CYYR1Q96J86 154 aa11.6□□□□□ -0.55
PDZD4-209ENST00000544474 LINC00615Q96LM1 132 aaPredicted RBP11.6□□□□□ -0.55
PDZD4-209ENST00000544474 NECAB3Q96P71 396 aaPredicted RBP11.6□□□□□ -0.55
PDZD4-209ENST00000544474 COMMD4Q9H0A8 199 aa11.6□□□□□ -0.55
PDZD4-209ENST00000544474 FBXO7Q9Y3I1 522 aa11.6□□□□□ -0.55
PDZD4-209ENST00000544474 MMACHCQ9Y4U1 282 aa11.6□□□□□ -0.55
PDZD4-209ENST00000544474 A0A0A6YYH2 397 aa11.6□□□□□ -0.55
PDZD4-209ENST00000544474 A6NJ64 397 aa11.6□□□□□ -0.55
PDZD4-209ENST00000544474 NDUFS1P28331 727 aa11.6□□□□□ -0.55
PDZD4-209ENST00000544474 CTXN1P60606 82 aa11.6□□□□□ -0.55
PDZD4-209ENST00000544474 HNRNPKP61978 463 aaKnown RBP eCLIP11.6□□□□□ -0.55
PDZD4-209ENST00000544474 TNFRSF9Q07011 255 aa11.6□□□□□ -0.55
PDZD4-209ENST00000544474 MEP1BQ16820 701 aa11.6□□□□□ -0.55
PDZD4-209ENST00000544474 CLEC12BQ2HXU8 276 aa11.6□□□□□ -0.55
PDZD4-209ENST00000544474 IL34Q6ZMJ4 242 aa11.6□□□□□ -0.55
PDZD4-209ENST00000544474 ACOT7LQ6ZUV0 252 aa11.6□□□□□ -0.55
PDZD4-209ENST00000544474 CCDC107Q8WV48 283 aa11.6□□□□□ -0.55
PDZD4-209ENST00000544474 FGF13Q92913 245 aa11.6□□□□□ -0.55
PDZD4-209ENST00000544474 IP6K3Q96PC2 410 aa11.6□□□□□ -0.55
PDZD4-209ENST00000544474 ALG12Q9BV10 488 aa11.6□□□□□ -0.55
PDZD4-209ENST00000544474 RGCCQ9H4X1 137 aa11.6□□□□□ -0.55
PDZD4-209ENST00000544474 WDR76Q9H967 626 aa11.6□□□□□ -0.55
PDZD4-209ENST00000544474 SIRT7Q9NRC8 400 aa11.6□□□□□ -0.55
PDZD4-209ENST00000544474 SIGLEC7Q9Y286 467 aa11.6□□□□□ -0.55
PDZD4-209ENST00000544474 FRMPD3Q5JV73 1810 aa11.6□□□□□ -0.55
PDZD4-209ENST00000544474 RNASEK-C17orf49H0YIS7 233 aa11.6□□□□□ -0.55
PDZD4-209ENST00000544474 SULT2B1O00204 365 aa11.6□□□□□ -0.55
PDZD4-209ENST00000544474 BHLHE40O14503 412 aa11.6□□□□□ -0.55
PDZD4-209ENST00000544474 LRP3O75074 770 aa11.6□□□□□ -0.55
PDZD4-209ENST00000544474 RDH16O75452 317 aa11.6□□□□□ -0.55
PDZD4-209ENST00000544474 CD53P19397 219 aa11.6□□□□□ -0.55
PDZD4-209ENST00000544474 MDKP21741 143 aaPredicted RBP11.6□□□□□ -0.55
PDZD4-209ENST00000544474 ACTC1P68032 377 aa11.6□□□□□ -0.55
PDZD4-209ENST00000544474 ACTA1P68133 377 aa11.6□□□□□ -0.55
PDZD4-209ENST00000544474 PPP1R1AQ13522 171 aa11.6□□□□□ -0.55
PDZD4-209ENST00000544474 SSPNQ14714 243 aa11.6□□□□□ -0.55
PDZD4-209ENST00000544474 NSUN5P2Q63ZY6 315 aa11.6□□□□□ -0.55
PDZD4-209ENST00000544474 SLC48A1Q6P1K1 146 aa11.6□□□□□ -0.55
PDZD4-209ENST00000544474 SLC36A1Q7Z2H8 476 aa11.6□□□□□ -0.55
PDZD4-209ENST00000544474 P4HA3Q7Z4N8 544 aa11.6□□□□□ -0.55
PDZD4-209ENST00000544474 ZNF584Q8IVC4 421 aa11.6□□□□□ -0.55
PDZD4-209ENST00000544474 GABRG1Q8N1C3 465 aa11.6□□□□□ -0.55
PDZD4-209ENST00000544474 SDF2Q99470 211 aa11.6□□□□□ -0.55
PDZD4-209ENST00000544474 TMEM74BQ9NUR3 256 aa11.6□□□□□ -0.55
PDZD4-209ENST00000544474 ST6GALNAC2Q9UJ37 374 aa11.6□□□□□ -0.55
PDZD4-209ENST00000544474 GDF2Q9UK05 429 aaPredicted RBP11.6□□□□□ -0.55
PDZD4-209ENST00000544474 PRR32B1ATL7 298 aa11.59□□□□□ -0.55
PDZD4-209ENST00000544474 OPN1LWP04000 364 aa11.59□□□□□ -0.55
PDZD4-209ENST00000544474 ERCC1P07992 297 aaPredicted RBP11.59□□□□□ -0.55
PDZD4-209ENST00000544474 CEBPBP17676 345 aa11.59□□□□□ -0.55
PDZD4-209ENST00000544474 SERPINF1P36955 418 aa11.59□□□□□ -0.55
PDZD4-209ENST00000544474 ABHD17CQ6PCB6 329 aa11.59□□□□□ -0.55
PDZD4-209ENST00000544474 DND1Q8IYX4 353 aaKnown RBP11.59□□□□□ -0.55
PDZD4-209ENST00000544474 ZNF101Q8IZC7 436 aa11.59□□□□□ -0.55
PDZD4-209ENST00000544474 OR10J5Q8NHC4 309 aa11.59□□□□□ -0.55
PDZD4-209ENST00000544474 FOXRED1Q96CU9 486 aaPredicted RBP11.59□□□□□ -0.55
PDZD4-209ENST00000544474 MS4A6EQ96DS6 147 aa11.59□□□□□ -0.55
PDZD4-209ENST00000544474 GFI1Q99684 422 aa11.59□□□□□ -0.55
PDZD4-209ENST00000544474 UTP23Q9BRU9 249 aaKnown RBP11.59□□□□□ -0.55
PDZD4-209ENST00000544474 POTEKPQ9BYX7 375 aa11.59□□□□□ -0.55
PDZD4-209ENST00000544474 MSRAQ9UJ68 235 aa11.59□□□□□ -0.55
PDZD4-209ENST00000544474 FBXL21Q9UKT6 434 aa11.59□□□□□ -0.55
PDZD4-209ENST00000544474 TNFSF18Q9UNG2 199 aa11.59□□□□□ -0.55
PDZD4-209ENST00000544474 KLHDC2Q9Y2U9 406 aa11.59□□□□□ -0.55
PDZD4-209ENST00000544474 SDCBPO00560 298 aaPredicted RBP11.59□□□□□ -0.55
PDZD4-209ENST00000544474 FGF16O43320 207 aa11.59□□□□□ -0.55
PDZD4-209ENST00000544474 CYTIPO60759 359 aa11.59□□□□□ -0.55
PDZD4-209ENST00000544474 DNASE1L1P49184 302 aa11.59□□□□□ -0.55
PDZD4-209ENST00000544474 INPP5JQ15735 1006 aaPredicted RBP11.59□□□□□ -0.55
PDZD4-209ENST00000544474 ACTBL2Q562R1 376 aa11.59□□□□□ -0.55
PDZD4-209ENST00000544474 DCST2Q5T1A1 773 aa11.59□□□□□ -0.55
PDZD4-209ENST00000544474 RPL22L1Q6P5R6 122 aaKnown RBP11.59□□□□□ -0.55
PDZD4-209ENST00000544474 SPNS3Q6ZMD2 512 aa11.59□□□□□ -0.55
PDZD4-209ENST00000544474 TMPRSS11FQ6ZWK6 438 aa11.59□□□□□ -0.55
PDZD4-209ENST00000544474 EID2Q8N6I1 236 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms