RNA–Protein interactions for RNA: ENST00000543939.5

COPS7A-218, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 1,728 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-218ENST00000543939 APEX1P27695 318 aaKnown RBP17.49■□□□□ 0.39
COPS7A-218ENST00000543939 ZNF79Q15937 498 aa17.49■□□□□ 0.39
COPS7A-218ENST00000543939 C3AR1Q16581 482 aa17.49■□□□□ 0.39
COPS7A-218ENST00000543939 ZNF181Q2M3W8 571 aa17.49■□□□□ 0.39
COPS7A-218ENST00000543939 RIPPLY2Q5TAB7 128 aa17.49■□□□□ 0.39
COPS7A-218ENST00000543939 STAC2Q6ZMT1 411 aa17.49■□□□□ 0.39
COPS7A-218ENST00000543939 GPR137CQ8N3F9 429 aa17.49■□□□□ 0.39
COPS7A-218ENST00000543939 FNDC9Q8TBE3 224 aa17.49■□□□□ 0.39
COPS7A-218ENST00000543939 CPT1CQ8TCG5 803 aa17.49■□□□□ 0.39
COPS7A-218ENST00000543939 TMEM106AQ96A25 262 aa17.49■□□□□ 0.39
COPS7A-218ENST00000543939 WDYHV1Q96HA8 205 aa17.49■□□□□ 0.39
COPS7A-218ENST00000543939 EXO5Q9H790 373 aa17.49■□□□□ 0.39
COPS7A-218ENST00000543939 NIPAL2Q9H841 368 aa17.49■□□□□ 0.39
COPS7A-218ENST00000543939 ANKRD61A6NGH8 418 aa17.48■□□□□ 0.39
COPS7A-218ENST00000543939 ATF1P18846 271 aa17.48■□□□□ 0.39
COPS7A-218ENST00000543939 HIST1H3AP68431 136 aa17.48■□□□□ 0.39
COPS7A-218ENST00000543939 RGS21Q2M5E4 152 aa17.48■□□□□ 0.39
COPS7A-218ENST00000543939 HIST2H3PS2Q5TEC6 136 aa17.48■□□□□ 0.39
COPS7A-218ENST00000543939 FAM27BQ5VT28 67 aa17.48■□□□□ 0.39
COPS7A-218ENST00000543939 PLXDC2Q6UX71 529 aa17.48■□□□□ 0.39
COPS7A-218ENST00000543939 ZNF704Q6ZNC4 412 aaPredicted RBP17.48■□□□□ 0.39
COPS7A-218ENST00000543939 HIST2H3AQ71DI3 136 aa17.48■□□□□ 0.39
COPS7A-218ENST00000543939 LINGO2Q7L985 606 aa17.48■□□□□ 0.39
COPS7A-218ENST00000543939 TSEN15Q8WW01 171 aaKnown RBP17.48■□□□□ 0.39
COPS7A-218ENST00000543939 CCDC32Q9BV29 185 aa17.48■□□□□ 0.39
COPS7A-218ENST00000543939 SLITRK2Q9H156 845 aa17.48■□□□□ 0.39
COPS7A-218ENST00000543939 RNF122Q9H9V4 155 aa17.48■□□□□ 0.39
COPS7A-218ENST00000543939 CRLF2Q9HC73 371 aa17.48■□□□□ 0.39
COPS7A-218ENST00000543939 ABCB10Q9NRK6 738 aa17.48■□□□□ 0.39
COPS7A-218ENST00000543939 NOSIPQ9Y314 301 aaKnown RBP17.48■□□□□ 0.39
COPS7A-218ENST00000543939 FABP12A6NFH5 140 aa17.47■□□□□ 0.39
COPS7A-218ENST00000543939 H3BSH0 61 aa17.47■□□□□ 0.39
COPS7A-218ENST00000543939 TFECO14948 347 aaPredicted RBP17.47■□□□□ 0.39
COPS7A-218ENST00000543939 SLC19A2O60779 497 aa17.47■□□□□ 0.39
COPS7A-218ENST00000543939 IGHG3P01860 377 aa17.47■□□□□ 0.39
COPS7A-218ENST00000543939 ACHEP22303 614 aa17.47■□□□□ 0.39
COPS7A-218ENST00000543939 EVX1P49640 407 aa17.47■□□□□ 0.39
COPS7A-218ENST00000543939 BCL2L15Q5TBC7 163 aa17.47■□□□□ 0.39
COPS7A-218ENST00000543939 CNIH2Q6PI25 160 aa17.47■□□□□ 0.39
COPS7A-218ENST00000543939 LRRTM1Q86UE6 522 aa17.47■□□□□ 0.39
COPS7A-218ENST00000543939 LYSMD2Q8IV50 215 aa17.47■□□□□ 0.39
COPS7A-218ENST00000543939 SOSTQ9BQB4 213 aa17.47■□□□□ 0.39
COPS7A-218ENST00000543939 SRRQ9GZT4 340 aa17.47■□□□□ 0.39
COPS7A-218ENST00000543939 BCO1Q9HAY6 547 aa17.47■□□□□ 0.39
COPS7A-218ENST00000543939 TCF7L1Q9HCS4 588 aa17.47■□□□□ 0.39
COPS7A-218ENST00000543939 DDX28Q9NUL7 540 aaKnown RBP17.47■□□□□ 0.39
COPS7A-218ENST00000543939 EMC3Q9P0I2 261 aa17.47■□□□□ 0.39
COPS7A-218ENST00000543939 ADAM30Q9UKF2 790 aa17.47■□□□□ 0.39
COPS7A-218ENST00000543939 AKAP13Q12802 2813 aa17.47■□□□□ 0.39
COPS7A-218ENST00000543939 ZNF724A8MTY0 619 aa17.47■□□□□ 0.39
COPS7A-218ENST00000543939 ZNF24P17028 368 aa17.47■□□□□ 0.39
COPS7A-218ENST00000543939 NPR2P20594 1047 aa17.47■□□□□ 0.39
COPS7A-218ENST00000543939 PSMA6P60900 246 aaKnown RBP17.47■□□□□ 0.39
COPS7A-218ENST00000543939 TAF13Q15543 124 aa17.47■□□□□ 0.39
COPS7A-218ENST00000543939 FAM131AQ6UXB0 335 aa17.47■□□□□ 0.39
COPS7A-218ENST00000543939 IGFL3Q6UXB1 125 aa17.47■□□□□ 0.39
COPS7A-218ENST00000543939 ELMOD2Q8IZ81 293 aa17.47■□□□□ 0.39
COPS7A-218ENST00000543939 GJC3Q8NFK1 279 aa17.47■□□□□ 0.39
COPS7A-218ENST00000543939 CHPT1Q8WUD6 406 aa17.47■□□□□ 0.39
COPS7A-218ENST00000543939 ASB5Q8WWX0 329 aa17.47■□□□□ 0.39
COPS7A-218ENST00000543939 ALKBH3Q96Q83 286 aaPredicted RBP17.47■□□□□ 0.39
COPS7A-218ENST00000543939 SCNM1Q9BWG6 230 aa17.47■□□□□ 0.39
COPS7A-218ENST00000543939 PRRG4Q9BZD6 226 aa17.47■□□□□ 0.39
COPS7A-218ENST00000543939 GPR35Q9HC97 309 aa17.47■□□□□ 0.39
COPS7A-218ENST00000543939 TMEM38BQ9NVV0 291 aa17.47■□□□□ 0.39
COPS7A-218ENST00000543939 ABRACLQ9P1F3 81 aa17.47■□□□□ 0.39
COPS7A-218ENST00000543939 HHLA2Q9UM44 414 aa17.47■□□□□ 0.39
COPS7A-218ENST00000543939 WASF3Q9UPY6 502 aa17.47■□□□□ 0.39
COPS7A-218ENST00000543939 TRAV8-7A0A075B6U6 113 aa17.46■□□□□ 0.39
COPS7A-218ENST00000543939 MRPL33O75394 65 aaKnown RBP17.46■□□□□ 0.39
COPS7A-218ENST00000543939 TTRP02766 147 aa17.46■□□□□ 0.39
COPS7A-218ENST00000543939 UBCP0CG48 685 aaKnown RBP17.46■□□□□ 0.39
COPS7A-218ENST00000543939 ADRA2CP18825 462 aa17.46■□□□□ 0.39
COPS7A-218ENST00000543939 CTSSP25774 331 aa17.46■□□□□ 0.39
COPS7A-218ENST00000543939 HSD11B1P28845 292 aa17.46■□□□□ 0.39
COPS7A-218ENST00000543939 TMEM244Q5VVB8 128 aa17.46■□□□□ 0.39
COPS7A-218ENST00000543939 STEAP3Q658P3 488 aa17.46■□□□□ 0.39
COPS7A-218ENST00000543939 METAP1DQ6UB28 335 aaPredicted RBP17.46■□□□□ 0.39
COPS7A-218ENST00000543939 Q6ZNX1 250 aa17.46■□□□□ 0.39
COPS7A-218ENST00000543939 CHMP1BQ7LBR1 199 aa17.46■□□□□ 0.39
COPS7A-218ENST00000543939 TUSC5Q8IXB3 177 aa17.46■□□□□ 0.39
COPS7A-218ENST00000543939 LRRC18Q8N456 261 aa17.46■□□□□ 0.39
COPS7A-218ENST00000543939 TRMT10AQ8TBZ6 339 aaKnown RBP17.46■□□□□ 0.39
COPS7A-218ENST00000543939 SH3GL3Q99963 347 aa17.46■□□□□ 0.39
COPS7A-218ENST00000543939 LINC00470Q9BZP3 86 aa17.46■□□□□ 0.39
COPS7A-218ENST00000543939 PBOV1Q9GZY1 135 aa17.46■□□□□ 0.39
COPS7A-218ENST00000543939 DHDHQ9UQ10 334 aa17.46■□□□□ 0.39
COPS7A-218ENST00000543939 SSUH2Q9Y2M2 353 aa17.46■□□□□ 0.39
COPS7A-218ENST00000543939 V9GY05 133 aa17.46■□□□□ 0.39
COPS7A-218ENST00000543939 CELSR3Q9NYQ7 3312 aa17.45■□□□□ 0.38
COPS7A-218ENST00000543939 LOC107986453A0A1B0GWG9 222 aa17.45■□□□□ 0.38
COPS7A-218ENST00000543939 ISPDA4D126 451 aa17.45■□□□□ 0.38
COPS7A-218ENST00000543939 DOK2O60496 412 aa17.45■□□□□ 0.38
COPS7A-218ENST00000543939 PAHP00439 452 aa17.45■□□□□ 0.38
COPS7A-218ENST00000543939 ELK1P19419 428 aa17.45■□□□□ 0.38
COPS7A-218ENST00000543939 GRB2P62993 217 aaKnown RBP17.45■□□□□ 0.38
COPS7A-218ENST00000543939 RNPS1Q15287 305 aaKnown RBP17.45■□□□□ 0.38
COPS7A-218ENST00000543939 XKRXQ6PP77 449 aa17.45■□□□□ 0.38
COPS7A-218ENST00000543939 ZC3HAV1Q7Z2W4 902 aaKnown RBP17.45■□□□□ 0.38
COPS7A-218ENST00000543939 ZADH2Q8N4Q0 377 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms