RNA–Protein interactions for RNA: ENST00000543545.5

CPSF7-221, Transcript of cleavage and polyadenylation specific factor 7, human

TSL 5

Gene CPSF7, Length 495 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CPSF7-221	ENST00000543545	VASH1	Q7L8A9	365 aa	Predicted RBP	8.83	□□□□□ -1
CPSF7-221	ENST00000543545	KRT77	Q7Z794	578 aa		8.83	□□□□□ -1
CPSF7-221	ENST00000543545	CDC20B	Q86Y33	519 aa		8.83	□□□□□ -1
CPSF7-221	ENST00000543545	ZNF540	Q8NDQ6	660 aa		8.83	□□□□□ -1
CPSF7-221	ENST00000543545	CPEB3	Q8NE35	698 aa	Known RBP	8.83	□□□□□ -1
CPSF7-221	ENST00000543545	IL17RD	Q8NFM7	739 aa		8.83	□□□□□ -1
CPSF7-221	ENST00000543545	OR2T27	Q8NH04	317 aa		8.83	□□□□□ -1
CPSF7-221	ENST00000543545	ASB17	Q8WXJ9	295 aa		8.83	□□□□□ -1
CPSF7-221	ENST00000543545	MAP6	Q96JE9	813 aa		8.83	□□□□□ -1
CPSF7-221	ENST00000543545	MNT	Q99583	582 aa		8.83	□□□□□ -1
CPSF7-221	ENST00000543545	ABHD6	Q9BV23	337 aa		8.83	□□□□□ -1
CPSF7-221	ENST00000543545	TTTY10	Q9BZA0	68 aa		8.83	□□□□□ -1
CPSF7-221	ENST00000543545	HDHD2	Q9H0R4	259 aa		8.83	□□□□□ -1
CPSF7-221	ENST00000543545	CHCHD3	Q9NX63	227 aa	Known RBP	8.83	□□□□□ -1
CPSF7-221	ENST00000543545	EIF3K	Q9UBQ5	218 aa	Known RBP	8.83	□□□□□ -1
CPSF7-221	ENST00000543545	KCNN3	Q9UGI6	736 aa		8.83	□□□□□ -1
CPSF7-221	ENST00000543545	POU2F3	Q9UKI9	436 aa		8.83	□□□□□ -1
CPSF7-221	ENST00000543545	NCOA6	Q14686	2063 aa	Predicted RBP	8.83	□□□□□ -1
CPSF7-221	ENST00000543545	DOPEY1	Q5JWR5	2465 aa		8.83	□□□□□ -1
CPSF7-221	ENST00000543545	FASN	P49327	2511 aa	Known RBP	8.83	□□□□□ -1
CPSF7-221	ENST00000543545	OR6C6	A6NF89	314 aa		8.82	□□□□□ -1
CPSF7-221	ENST00000543545	DPRX	A6NFQ7	191 aa		8.82	□□□□□ -1
CPSF7-221	ENST00000543545	PSMD9	O00233	223 aa		8.82	□□□□□ -1
CPSF7-221	ENST00000543545	ABCD4	O14678	606 aa		8.82	□□□□□ -1
CPSF7-221	ENST00000543545	PHYH	O14832	338 aa		8.82	□□□□□ -1
CPSF7-221	ENST00000543545	IGKV3-15	P01624	115 aa		8.82	□□□□□ -1
CPSF7-221	ENST00000543545	IGLV1-44	P01699	117 aa		8.82	□□□□□ -1
CPSF7-221	ENST00000543545	H2BFM	P0C1H6	154 aa		8.82	□□□□□ -1
CPSF7-221	ENST00000543545	PSKH1	P11801	424 aa		8.82	□□□□□ -1
CPSF7-221	ENST00000543545	ZNF14	P17017	642 aa	Predicted RBP	8.82	□□□□□ -1
CPSF7-221	ENST00000543545	EEF1B2	P24534	225 aa	Known RBP	8.82	□□□□□ -1
CPSF7-221	ENST00000543545	HSD11B1	P28845	292 aa		8.82	□□□□□ -1
CPSF7-221	ENST00000543545	NR1H2	P55055	460 aa		8.82	□□□□□ -1
CPSF7-221	ENST00000543545	CXCR4	P61073	352 aa		8.82	□□□□□ -1
CPSF7-221	ENST00000543545	ACTC1	P68032	377 aa		8.82	□□□□□ -1
CPSF7-221	ENST00000543545	ACTA1	P68133	377 aa		8.82	□□□□□ -1
CPSF7-221	ENST00000543545	HIST1H3A	P68431	136 aa		8.82	□□□□□ -1
CPSF7-221	ENST00000543545	NAAA	Q02083	359 aa		8.82	□□□□□ -1
CPSF7-221	ENST00000543545	BSPH1	Q075Z2	132 aa		8.82	□□□□□ -1
CPSF7-221	ENST00000543545	HIST2H3PS2	Q5TEC6	136 aa		8.82	□□□□□ -1
CPSF7-221	ENST00000543545	KCTD18	Q6PI47	426 aa	Predicted RBP	8.82	□□□□□ -1
CPSF7-221	ENST00000543545	ARL9	Q6T311	187 aa		8.82	□□□□□ -1
CPSF7-221	ENST00000543545	ZNF322	Q6U7Q0	402 aa	Predicted RBP	8.82	□□□□□ -1
CPSF7-221	ENST00000543545	AHSA2	Q719I0	299 aa		8.82	□□□□□ -1
CPSF7-221	ENST00000543545	HIST2H3A	Q71DI3	136 aa		8.82	□□□□□ -1
CPSF7-221	ENST00000543545	STX19	Q8N4C7	294 aa		8.82	□□□□□ -1
CPSF7-221	ENST00000543545	ACBD7	Q8N6N7	88 aa		8.82	□□□□□ -1
CPSF7-221	ENST00000543545	OR52I1	Q8NGK6	324 aa		8.82	□□□□□ -1
CPSF7-221	ENST00000543545	FBLIM1	Q8WUP2	373 aa		8.82	□□□□□ -1
CPSF7-221	ENST00000543545	SNX33	Q8WV41	574 aa		8.82	□□□□□ -1
CPSF7-221	ENST00000543545	SLC7A6	Q92536	515 aa		8.82	□□□□□ -1
CPSF7-221	ENST00000543545	GGH	Q92820	318 aa		8.82	□□□□□ -1
CPSF7-221	ENST00000543545	SPTSSA	Q969W0	71 aa		8.82	□□□□□ -1
CPSF7-221	ENST00000543545	MRPL48	Q96GC5	212 aa	Known RBP	8.82	□□□□□ -1
CPSF7-221	ENST00000543545	TMEM80	Q96HE8	168 aa		8.82	□□□□□ -1
CPSF7-221	ENST00000543545	MYCBP	Q99417	103 aa	Predicted RBP	8.82	□□□□□ -1
CPSF7-221	ENST00000543545	COQ7	Q99807	217 aa		8.82	□□□□□ -1
CPSF7-221	ENST00000543545	ATF6B	Q99941	703 aa		8.82	□□□□□ -1
CPSF7-221	ENST00000543545	MRO	Q9BYG7	248 aa		8.82	□□□□□ -1
CPSF7-221	ENST00000543545	OR51B6	Q9H340	312 aa		8.82	□□□□□ -1
CPSF7-221	ENST00000543545	ELOVL3	Q9HB03	270 aa		8.82	□□□□□ -1
CPSF7-221	ENST00000543545	CRNN	Q9UBG3	495 aa	Predicted RBP	8.82	□□□□□ -1
CPSF7-221	ENST00000543545	COPS3	Q9UNS2	423 aa		8.82	□□□□□ -1
CPSF7-221	ENST00000543545	EXOG	Q9Y2C4	368 aa	Known RBP	8.82	□□□□□ -1
CPSF7-221	ENST00000543545	KLHDC2	Q9Y2U9	406 aa		8.82	□□□□□ -1
CPSF7-221	ENST00000543545	TPRKB	Q9Y3C4	175 aa		8.82	□□□□□ -1
CPSF7-221	ENST00000543545	GRIP1	Q9Y3R0	1128 aa		8.82	□□□□□ -1
CPSF7-221	ENST00000543545	SPEF1	Q9Y4P9	236 aa		8.82	□□□□□ -1
CPSF7-221	ENST00000543545	N6AMT1	Q9Y5N5	214 aa		8.82	□□□□□ -1
CPSF7-221	ENST00000543545	ATP23	Q9Y6H3	246 aa		8.82	□□□□□ -1
CPSF7-221	ENST00000543545	USP9X	Q93008	2570 aa	Predicted RBP	8.82	□□□□□ -1
CPSF7-221	ENST00000543545		A0A1W2PQL4	384 aa	Predicted RBP	8.81	□□□□□ -1
CPSF7-221	ENST00000543545		A6NNC1	897 aa		8.81	□□□□□ -1
CPSF7-221	ENST00000543545	DEFB108A	A8MXU0	73 aa		8.81	□□□□□ -1
CPSF7-221	ENST00000543545	ZNF878	C9JN71	531 aa		8.81	□□□□□ -1
CPSF7-221	ENST00000543545	SLC1A7	O00341	560 aa		8.81	□□□□□ -1
CPSF7-221	ENST00000543545	SYNGR3	O43761	229 aa		8.81	□□□□□ -1
CPSF7-221	ENST00000543545	KRT8	P05787	483 aa		8.81	□□□□□ -1
CPSF7-221	ENST00000543545	DBH	P09172	617 aa		8.81	□□□□□ -1
CPSF7-221	ENST00000543545	COX5B	P10606	129 aa		8.81	□□□□□ -1
CPSF7-221	ENST00000543545	MYL12A	P19105	171 aa		8.81	□□□□□ -1
CPSF7-221	ENST00000543545	DCK	P27707	260 aa		8.81	□□□□□ -1
CPSF7-221	ENST00000543545	SLC6A9	P48067	706 aa		8.81	□□□□□ -1
CPSF7-221	ENST00000543545	PRKX	P51817	358 aa		8.81	□□□□□ -1
CPSF7-221	ENST00000543545	TPTE	P56180	551 aa		8.81	□□□□□ -1
CPSF7-221	ENST00000543545	GRB2	P62993	217 aa	Known RBP	8.81	□□□□□ -1
CPSF7-221	ENST00000543545	ST3GAL4	Q11206	333 aa		8.81	□□□□□ -1
CPSF7-221	ENST00000543545	DAZAP2	Q15038	168 aa	Predicted RBP	8.81	□□□□□ -1
CPSF7-221	ENST00000543545	C3orf36	Q3SXR2	165 aa		8.81	□□□□□ -1
CPSF7-221	ENST00000543545	NCMAP	Q5T1S8	102 aa		8.81	□□□□□ -1
CPSF7-221	ENST00000543545	LAIR2	Q6ISS4	152 aa		8.81	□□□□□ -1
CPSF7-221	ENST00000543545	ADAM5	Q6NVV9	412 aa		8.81	□□□□□ -1
CPSF7-221	ENST00000543545	VHLL	Q6RSH7	139 aa		8.81	□□□□□ -1
CPSF7-221	ENST00000543545	LRRN1	Q6UXK5	716 aa		8.81	□□□□□ -1
CPSF7-221	ENST00000543545	LHFPL3	Q86UP9	236 aa		8.81	□□□□□ -1
CPSF7-221	ENST00000543545	MYPOP	Q86VE0	399 aa	Predicted RBP	8.81	□□□□□ -1
CPSF7-221	ENST00000543545	ZNF584	Q8IVC4	421 aa		8.81	□□□□□ -1
CPSF7-221	ENST00000543545	ZNF283	Q8N7M2	679 aa		8.81	□□□□□ -1
CPSF7-221	ENST00000543545	ST7L	Q8TDW4	575 aa		8.81	□□□□□ -1
CPSF7-221	ENST00000543545	RNF133	Q8WVZ7	376 aa		8.81	□□□□□ -1

Retrieved 100 of 20,778 RNA–protein pairs in 46 ms