RNA–Protein interactions for RNA: ENST00000543542.1

LTBR-212, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 367 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-212ENST00000543542 AGAP6Q5VW22 663 aa5.47□□□□□ -1.53
LTBR-212ENST00000543542 RGS7BPQ6MZT1 257 aaPredicted RBP5.47□□□□□ -1.53
LTBR-212ENST00000543542 SLC18B1Q6NT16 456 aa5.47□□□□□ -1.53
LTBR-212ENST00000543542 KCTD18Q6PI47 426 aaPredicted RBP5.47□□□□□ -1.53
LTBR-212ENST00000543542 IZUMO2Q6UXV1 221 aa5.47□□□□□ -1.53
LTBR-212ENST00000543542 C20orf204Q6ZNR8 217 aa5.47□□□□□ -1.53
LTBR-212ENST00000543542 CFAP77Q6ZQR2 320 aa5.47□□□□□ -1.53
LTBR-212ENST00000543542 VASH1Q7L8A9 365 aaPredicted RBP5.47□□□□□ -1.53
LTBR-212ENST00000543542 SLC16A9Q7RTY1 509 aa5.47□□□□□ -1.53
LTBR-212ENST00000543542 KRT77Q7Z794 578 aa5.47□□□□□ -1.53
LTBR-212ENST00000543542 ZNF584Q8IVC4 421 aa5.47□□□□□ -1.53
LTBR-212ENST00000543542 ENTHD1Q8IYW4 607 aa5.47□□□□□ -1.53
LTBR-212ENST00000543542 C8orf59Q8N0T1 100 aaPredicted RBP5.47□□□□□ -1.53
LTBR-212ENST00000543542 ZNF283Q8N7M2 679 aa5.47□□□□□ -1.53
LTBR-212ENST00000543542 ZNF454Q8N9F8 522 aa5.47□□□□□ -1.53
LTBR-212ENST00000543542 OR1J1Q8NGS3 322 aa5.47□□□□□ -1.53
LTBR-212ENST00000543542 ABHD4Q8TB40 342 aa5.47□□□□□ -1.53
LTBR-212ENST00000543542 SMAP2Q8WU79 429 aaPredicted RBP5.47□□□□□ -1.53
LTBR-212ENST00000543542 TMEM171Q8WVE6 324 aa5.47□□□□□ -1.53
LTBR-212ENST00000543542 NRG4Q8WWG1 115 aa5.47□□□□□ -1.53
LTBR-212ENST00000543542 SLC7A6Q92536 515 aa5.47□□□□□ -1.53
LTBR-212ENST00000543542 UBE2FQ969M7 185 aa5.47□□□□□ -1.53
LTBR-212ENST00000543542 SLAMF6Q96DU3 332 aa5.47□□□□□ -1.53
LTBR-212ENST00000543542 C4orf45Q96LM5 186 aa5.47□□□□□ -1.53
LTBR-212ENST00000543542 ZNF582Q96NG8 517 aaPredicted RBP5.47□□□□□ -1.53
LTBR-212ENST00000543542 TBX5Q99593 518 aa5.47□□□□□ -1.53
LTBR-212ENST00000543542 CCL19Q99731 98 aa5.47□□□□□ -1.53
LTBR-212ENST00000543542 COQ7Q99807 217 aa5.47□□□□□ -1.53
LTBR-212ENST00000543542 DHRS9Q9BPW9 319 aa5.47□□□□□ -1.53
LTBR-212ENST00000543542 ADI1Q9BV57 179 aa5.47□□□□□ -1.53
LTBR-212ENST00000543542 TTTY10Q9BZA0 68 aa5.47□□□□□ -1.53
LTBR-212ENST00000543542 ELOVL3Q9HB03 270 aa5.47□□□□□ -1.53
LTBR-212ENST00000543542 AASSQ9UDR5 926 aa5.47□□□□□ -1.53
LTBR-212ENST00000543542 WARS2Q9UGM6 360 aaKnown RBP5.47□□□□□ -1.53
LTBR-212ENST00000543542 CYB5R1Q9UHQ9 305 aa5.47□□□□□ -1.53
LTBR-212ENST00000543542 IKZF2Q9UKS7 526 aa5.47□□□□□ -1.53
LTBR-212ENST00000543542 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP5.47□□□□□ -1.53
LTBR-212ENST00000543542 LAMP3Q9UQV4 416 aa5.47□□□□□ -1.53
LTBR-212ENST00000543542 CMAHPQ9Y471 501 aa5.47□□□□□ -1.53
LTBR-212ENST00000543542 TMEM14AQ9Y6G1 99 aa5.47□□□□□ -1.53
LTBR-212ENST00000543542 HEATR1Q9H583 2144 aaKnown RBP5.47□□□□□ -1.53
LTBR-212ENST00000543542 SPTBN1Q01082 2364 aaKnown RBP5.47□□□□□ -1.53
LTBR-212ENST00000543542 LRBAP50851 2863 aa5.46□□□□□ -1.53
LTBR-212ENST00000543542 FASNP49327 2511 aaKnown RBP5.46□□□□□ -1.53
LTBR-212ENST00000543542 CELSR2Q9HCU4 2923 aa5.46□□□□□ -1.54
LTBR-212ENST00000543542 LOC100509620A0A075B734 347 aa5.46□□□□□ -1.54
LTBR-212ENST00000543542 A0A1W2PPW3 197 aa5.46□□□□□ -1.54
LTBR-212ENST00000543542 FAM221AA4D161 298 aa5.46□□□□□ -1.54
LTBR-212ENST00000543542 CCDC182A6NF36 153 aa5.46□□□□□ -1.54
LTBR-212ENST00000543542 E7EQL1 145 aa5.46□□□□□ -1.54
LTBR-212ENST00000543542 H0YAE9 185 aa5.46□□□□□ -1.54
LTBR-212ENST00000543542 PHYHO14832 338 aa5.46□□□□□ -1.54
LTBR-212ENST00000543542 TBX1O43435 398 aa5.46□□□□□ -1.54
LTBR-212ENST00000543542 SYNGR3O43761 229 aa5.46□□□□□ -1.54
LTBR-212ENST00000543542 APOL3O95236 402 aa5.46□□□□□ -1.54
LTBR-212ENST00000543542 APOC1P02654 83 aa5.46□□□□□ -1.54
LTBR-212ENST00000543542 RAF1P04049 648 aa5.46□□□□□ -1.54
LTBR-212ENST00000543542 LCATP04180 440 aa5.46□□□□□ -1.54
LTBR-212ENST00000543542 ANXA2P07355 339 aaKnown RBP5.46□□□□□ -1.54
LTBR-212ENST00000543542 DBHP09172 617 aa5.46□□□□□ -1.54
LTBR-212ENST00000543542 BMP4P12644 408 aa5.46□□□□□ -1.54
LTBR-212ENST00000543542 ZNF35P13682 527 aa5.46□□□□□ -1.54
LTBR-212ENST00000543542 NR4A1P22736 598 aa5.46□□□□□ -1.54
LTBR-212ENST00000543542 LOXP28300 417 aaPredicted RBP5.46□□□□□ -1.54
LTBR-212ENST00000543542 GCH1P30793 250 aa5.46□□□□□ -1.54
LTBR-212ENST00000543542 HTR1FP30939 366 aa5.46□□□□□ -1.54
LTBR-212ENST00000543542 THBS4P35443 961 aa5.46□□□□□ -1.54
LTBR-212ENST00000543542 MTNR1AP48039 350 aa5.46□□□□□ -1.54
LTBR-212ENST00000543542 HSPA13P48723 471 aa5.46□□□□□ -1.54
LTBR-212ENST00000543542 RGS6P49758 472 aa5.46□□□□□ -1.54
LTBR-212ENST00000543542 PRKXP51817 358 aa5.46□□□□□ -1.54
LTBR-212ENST00000543542 NUDT6P53370 316 aa5.46□□□□□ -1.54
LTBR-212ENST00000543542 HCCSP53701 268 aa5.46□□□□□ -1.54
LTBR-212ENST00000543542 UCP2P55851 309 aa5.46□□□□□ -1.54
LTBR-212ENST00000543542 KRTAP10-9P60411 292 aa5.46□□□□□ -1.54
LTBR-212ENST00000543542 SNRPGP62308 76 aaKnown RBP5.46□□□□□ -1.54
LTBR-212ENST00000543542 GRB2P62993 217 aaKnown RBP5.46□□□□□ -1.54
LTBR-212ENST00000543542 MALLQ13021 153 aa5.46□□□□□ -1.54
LTBR-212ENST00000543542 TMED1Q13445 227 aa5.46□□□□□ -1.54
LTBR-212ENST00000543542 IL18R1Q13478 541 aa5.46□□□□□ -1.54
LTBR-212ENST00000543542 SNCBQ16143 134 aa5.46□□□□□ -1.54
LTBR-212ENST00000543542 OCLNQ16625 522 aa5.46□□□□□ -1.54
LTBR-212ENST00000543542 ZNF718Q3SXZ3 478 aa5.46□□□□□ -1.54
LTBR-212ENST00000543542 TEX30Q5JUR7 227 aa5.46□□□□□ -1.54
LTBR-212ENST00000543542 SPATA46Q5T0L3 261 aa5.46□□□□□ -1.54
LTBR-212ENST00000543542 C6orf52Q5T4I8 152 aa5.46□□□□□ -1.54
LTBR-212ENST00000543542 ZNF691Q5VV52 312 aa5.46□□□□□ -1.54
LTBR-212ENST00000543542 ZNF544Q6NX49 715 aa5.46□□□□□ -1.54
LTBR-212ENST00000543542 SLC35F2Q8IXU6 374 aa5.46□□□□□ -1.54
LTBR-212ENST00000543542 TIGD4Q8IY51 512 aa5.46□□□□□ -1.54
LTBR-212ENST00000543542 MUC15Q8N387 334 aa5.46□□□□□ -1.54
LTBR-212ENST00000543542 PAQR4Q8N4S7 273 aaPredicted RBP5.46□□□□□ -1.54
LTBR-212ENST00000543542 ZNF611Q8N823 705 aa5.46□□□□□ -1.54
LTBR-212ENST00000543542 NUP37Q8NFH4 326 aa5.46□□□□□ -1.54
LTBR-212ENST00000543542 OR10H4Q8NGA5 316 aa5.46□□□□□ -1.54
LTBR-212ENST00000543542 OR5L1Q8NGL2 311 aa5.46□□□□□ -1.54
LTBR-212ENST00000543542 OTOSQ8NHW6 89 aa5.46□□□□□ -1.54
LTBR-212ENST00000543542 NRGNQ92686 78 aa5.46□□□□□ -1.54
LTBR-212ENST00000543542 RNFT2Q96EX2 444 aa5.46□□□□□ -1.54
LTBR-212ENST00000543542 MRPL48Q96GC5 212 aaKnown RBP5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 89.5 ms