RNA–Protein interactions for RNA: ENST00000543397.1

SRGAP1-206, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 1 (best) BASIC

Gene SRGAP1, Length 5,652 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-206ENST00000543397 NTNG1Q9Y2I2 539 aa6.27□□□□□ -1.41
SRGAP1-206ENST00000543397 ASB4Q9Y574 426 aa6.27□□□□□ -1.41
SRGAP1-206ENST00000543397 RGPD4Q7Z3J3 1758 aa6.27□□□□□ -1.41
SRGAP1-206ENST00000543397 NAP1L6A6NFF2 107 aa6.27□□□□□ -1.41
SRGAP1-206ENST00000543397 SPINT2O43291 252 aa6.27□□□□□ -1.41
SRGAP1-206ENST00000543397 RP2O75695 350 aa6.27□□□□□ -1.41
SRGAP1-206ENST00000543397 IFNA1P01562 189 aa6.27□□□□□ -1.41
SRGAP1-206ENST00000543397 BLVRBP30043 206 aaPredicted RBP6.27□□□□□ -1.41
SRGAP1-206ENST00000543397 ZNF93P35789 620 aaPredicted RBP6.27□□□□□ -1.41
SRGAP1-206ENST00000543397 SNCAP37840 140 aa6.27□□□□□ -1.41
SRGAP1-206ENST00000543397 HIKESHIQ53FT3 197 aa6.27□□□□□ -1.41
SRGAP1-206ENST00000543397 GPR155Q7Z3F1 870 aa6.27□□□□□ -1.41
SRGAP1-206ENST00000543397 WDR5BQ86VZ2 330 aa6.27□□□□□ -1.41
SRGAP1-206ENST00000543397 SLC22A24Q8N4F4 322 aa6.27□□□□□ -1.41
SRGAP1-206ENST00000543397 TMEM185AQ8NFB2 350 aa6.27□□□□□ -1.41
SRGAP1-206ENST00000543397 LIN7BQ9HAP6 207 aa6.27□□□□□ -1.41
SRGAP1-206ENST00000543397 SHROOM3Q8TF72 1996 aa6.27□□□□□ -1.41
SRGAP1-206ENST00000543397 A0A0A6YYD5 115 aa6.27□□□□□ -1.41
SRGAP1-206ENST00000543397 IGHV3-15A0A0B4J1V0 119 aa6.27□□□□□ -1.41
SRGAP1-206ENST00000543397 A0A0B4J293 547 aa6.27□□□□□ -1.41
SRGAP1-206ENST00000543397 MOSPD3O75425 235 aa6.27□□□□□ -1.41
SRGAP1-206ENST00000543397 IFNA17P01571 189 aa6.27□□□□□ -1.41
SRGAP1-206ENST00000543397 HLA-DMAP28067 261 aa6.27□□□□□ -1.41
SRGAP1-206ENST00000543397 VEGFCP49767 419 aa6.27□□□□□ -1.41
SRGAP1-206ENST00000543397 MEOX1P50221 254 aa6.27□□□□□ -1.41
SRGAP1-206ENST00000543397 TAS2R46P59540 309 aa6.27□□□□□ -1.41
SRGAP1-206ENST00000543397 RPS18P62269 152 aaKnown RBP6.27□□□□□ -1.41
SRGAP1-206ENST00000543397 NFATC3Q12968 1075 aa6.27□□□□□ -1.41
SRGAP1-206ENST00000543397 ZNF718Q3SXZ3 478 aa6.27□□□□□ -1.41
SRGAP1-206ENST00000543397 GPR157Q5UAW9 335 aa6.27□□□□□ -1.41
SRGAP1-206ENST00000543397 USP51Q70EK9 711 aa6.27□□□□□ -1.41
SRGAP1-206ENST00000543397 TRILQ7L0X0 811 aa6.27□□□□□ -1.41
SRGAP1-206ENST00000543397 SLC16A9Q7RTY1 509 aa6.27□□□□□ -1.41
SRGAP1-206ENST00000543397 MOGAT3Q86VF5 341 aa6.27□□□□□ -1.41
SRGAP1-206ENST00000543397 NDNFQ8TB73 568 aa6.27□□□□□ -1.41
SRGAP1-206ENST00000543397 ZFAND1Q8TCF1 268 aa6.27□□□□□ -1.41
SRGAP1-206ENST00000543397 RAB3CQ96E17 227 aa6.27□□□□□ -1.41
SRGAP1-206ENST00000543397 MED29Q9NX70 200 aa6.27□□□□□ -1.41
SRGAP1-206ENST00000543397 MTCH1Q9NZJ7 389 aa6.27□□□□□ -1.41
SRGAP1-206ENST00000543397 EBF1Q9UH73 591 aa6.27□□□□□ -1.41
SRGAP1-206ENST00000543397 CEP250Q9BV73 2442 aa6.26□□□□□ -1.41
SRGAP1-206ENST00000543397 C5orf49A4QMS7 147 aa6.26□□□□□ -1.41
SRGAP1-206ENST00000543397 GABRPO00591 440 aa6.26□□□□□ -1.41
SRGAP1-206ENST00000543397 GFRA3O60609 400 aa6.26□□□□□ -1.41
SRGAP1-206ENST00000543397 GAAP10253 952 aa6.26□□□□□ -1.41
SRGAP1-206ENST00000543397 CCL4P13236 92 aa6.26□□□□□ -1.41
SRGAP1-206ENST00000543397 SDHAP31040 664 aa6.26□□□□□ -1.41
SRGAP1-206ENST00000543397 POLR2IP36954 125 aaKnown RBP6.26□□□□□ -1.41
SRGAP1-206ENST00000543397 ALKBH1Q13686 389 aaKnown RBP6.26□□□□□ -1.41
SRGAP1-206ENST00000543397 NKG7Q16617 165 aa6.26□□□□□ -1.41
SRGAP1-206ENST00000543397 EMC4Q5J8M3 183 aa6.26□□□□□ -1.41
SRGAP1-206ENST00000543397 TMEM108Q6UXF1 575 aa6.26□□□□□ -1.41
SRGAP1-206ENST00000543397 DLEU7Q6UYE1 221 aa6.26□□□□□ -1.41
SRGAP1-206ENST00000543397 CATSPERDQ86XM0 798 aa6.26□□□□□ -1.41
SRGAP1-206ENST00000543397 ZNF561Q8N587 486 aa6.26□□□□□ -1.41
SRGAP1-206ENST00000543397 OR2Y1Q8NGV0 311 aa6.26□□□□□ -1.41
SRGAP1-206ENST00000543397 FNDC9Q8TBE3 224 aa6.26□□□□□ -1.41
SRGAP1-206ENST00000543397 ROBO4Q8WZ75 1007 aa6.26□□□□□ -1.41
SRGAP1-206ENST00000543397 EMG1Q92979 244 aaKnown RBP6.26□□□□□ -1.41
SRGAP1-206ENST00000543397 FGGYQ96C11 551 aa6.26□□□□□ -1.41
SRGAP1-206ENST00000543397 HRASLS5Q96KN8 279 aa6.26□□□□□ -1.41
SRGAP1-206ENST00000543397 DCLRE1CQ96SD1 692 aaKnown RBP6.26□□□□□ -1.41
SRGAP1-206ENST00000543397 NIPSNAP1Q9BPW8 284 aa6.26□□□□□ -1.41
SRGAP1-206ENST00000543397 ZFP64Q9NPA5 681 aa6.26□□□□□ -1.41
SRGAP1-206ENST00000543397 GFOD1Q9NXC2 390 aa6.26□□□□□ -1.41
SRGAP1-206ENST00000543397 SLC5A6Q9Y289 635 aa6.26□□□□□ -1.41
SRGAP1-206ENST00000543397 POLDIP2Q9Y2S7 368 aa6.26□□□□□ -1.41
SRGAP1-206ENST00000543397 UNC13CQ8NB66 2214 aa6.26□□□□□ -1.41
SRGAP1-206ENST00000543397 CEBPZOSA8MTT3 80 aa6.26□□□□□ -1.41
SRGAP1-206ENST00000543397 B8ZZF3 427 aa6.26□□□□□ -1.41
SRGAP1-206ENST00000543397 GUSBP08236 651 aa6.26□□□□□ -1.41
SRGAP1-206ENST00000543397 OR8U9P0C7N5 309 aa6.26□□□□□ -1.41
SRGAP1-206ENST00000543397 BMP5P22003 454 aa6.26□□□□□ -1.41
SRGAP1-206ENST00000543397 CRHBPP24387 322 aa6.26□□□□□ -1.41
SRGAP1-206ENST00000543397 CD82P27701 267 aa6.26□□□□□ -1.41
SRGAP1-206ENST00000543397 CA5AP35218 305 aa6.26□□□□□ -1.41
SRGAP1-206ENST00000543397 TLE4Q04727 773 aa6.26□□□□□ -1.41
SRGAP1-206ENST00000543397 RPL18Q07020 188 aaKnown RBP6.26□□□□□ -1.41
SRGAP1-206ENST00000543397 ZNF169Q14929 603 aaPredicted RBP6.26□□□□□ -1.41
SRGAP1-206ENST00000543397 PAN3Q58A45 887 aaKnown RBP6.26□□□□□ -1.41
SRGAP1-206ENST00000543397 TMEM211Q6ICI0 200 aa6.26□□□□□ -1.41
SRGAP1-206ENST00000543397 WDR74Q6RFH5 385 aaPredicted RBP6.26□□□□□ -1.41
SRGAP1-206ENST00000543397 DNAJC22Q8N4W6 341 aa6.26□□□□□ -1.41
SRGAP1-206ENST00000543397 SLC15A4Q8N697 577 aa6.26□□□□□ -1.41
SRGAP1-206ENST00000543397 LINC01555Q8NAE3 123 aa6.26□□□□□ -1.41
SRGAP1-206ENST00000543397 FAM83FQ8NEG4 500 aaPredicted RBP6.26□□□□□ -1.41
SRGAP1-206ENST00000543397 CT55Q8WUE5 264 aa6.26□□□□□ -1.41
SRGAP1-206ENST00000543397 NUDT8Q8WV74 236 aa6.26□□□□□ -1.41
SRGAP1-206ENST00000543397 OR2A5Q96R48 311 aa6.26□□□□□ -1.41
SRGAP1-206ENST00000543397 PRDM7Q9NQW5 492 aa6.26□□□□□ -1.41
SRGAP1-206ENST00000543397 FAM53CQ9NYF3 392 aa6.26□□□□□ -1.41
SRGAP1-206ENST00000543397 GPR55Q9Y2T6 319 aaPredicted RBP6.26□□□□□ -1.41
SRGAP1-206ENST00000543397 LSM5Q9Y4Y9 91 aaKnown RBP6.26□□□□□ -1.41
SRGAP1-206ENST00000543397 LOC102724200A0A096LPH7 203 aaPredicted RBP6.26□□□□□ -1.41
SRGAP1-206ENST00000543397 FAM90A27PA6NNH2 459 aa6.26□□□□□ -1.41
SRGAP1-206ENST00000543397 C21orf140B9A014 251 aa6.26□□□□□ -1.41
SRGAP1-206ENST00000543397 M0R135 149 aa6.26□□□□□ -1.41
SRGAP1-206ENST00000543397 FAM157BP0CG42 384 aa6.26□□□□□ -1.41
SRGAP1-206ENST00000543397 NAGAP17050 411 aa6.26□□□□□ -1.41
SRGAP1-206ENST00000543397 NFYBP25208 207 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms