RNA–Protein interactions for RNA: ENST00000542179.1

LDHA-220, Transcript of lactate dehydrogenase A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDHA, Length 1,288 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHA-220ENST00000542179 FABP5Q01469 135 aa8.12□□□□□ -1.11
LDHA-220ENST00000542179 ROR2Q01974 943 aaKnown RBP8.12□□□□□ -1.11
LDHA-220ENST00000542179 ENDOGQ14249 297 aaKnown RBP8.12□□□□□ -1.11
LDHA-220ENST00000542179 SPCS2Q15005 226 aa8.12□□□□□ -1.11
LDHA-220ENST00000542179 SGCAQ16586 387 aa8.12□□□□□ -1.11
LDHA-220ENST00000542179 CEACAM16Q2WEN9 425 aa8.12□□□□□ -1.11
LDHA-220ENST00000542179 OTPQ5XKR4 325 aa8.12□□□□□ -1.11
LDHA-220ENST00000542179 ARL9Q6T311 187 aa8.12□□□□□ -1.11
LDHA-220ENST00000542179 LRRN1Q6UXK5 716 aa8.12□□□□□ -1.11
LDHA-220ENST00000542179 RPTNQ6XPR3 784 aa8.12□□□□□ -1.11
LDHA-220ENST00000542179 USP43Q70EL4 1123 aa8.12□□□□□ -1.11
LDHA-220ENST00000542179 FAM214BQ7L5A3 538 aa8.12□□□□□ -1.11
LDHA-220ENST00000542179 NUFIP2Q7Z417 695 aaKnown RBP8.12□□□□□ -1.11
LDHA-220ENST00000542179 ABHD12BQ7Z5M8 362 aaPredicted RBP8.12□□□□□ -1.11
LDHA-220ENST00000542179 ZSCAN2Q7Z7L9 614 aaPredicted RBP8.12□□□□□ -1.11
LDHA-220ENST00000542179 LINC00346Q8IVM7 164 aa8.12□□□□□ -1.11
LDHA-220ENST00000542179 ZNF100Q8IYN0 542 aa8.12□□□□□ -1.11
LDHA-220ENST00000542179 CISD2Q8N5K1 135 aaKnown RBP8.12□□□□□ -1.11
LDHA-220ENST00000542179 ZFP41Q8N8Y5 198 aa8.12□□□□□ -1.11
LDHA-220ENST00000542179 GJC3Q8NFK1 279 aa8.12□□□□□ -1.11
LDHA-220ENST00000542179 KBTBD8Q8NFY9 601 aa8.12□□□□□ -1.11
LDHA-220ENST00000542179 OR5M9Q8NGP3 310 aa8.12□□□□□ -1.11
LDHA-220ENST00000542179 MBD3L2Q8NHZ7 208 aaPredicted RBP8.12□□□□□ -1.11
LDHA-220ENST00000542179 FAM57AQ8TBR7 257 aa8.12□□□□□ -1.11
LDHA-220ENST00000542179 GHSRQ92847 366 aa8.12□□□□□ -1.11
LDHA-220ENST00000542179 SLAMF6Q96DU3 332 aa8.12□□□□□ -1.11
LDHA-220ENST00000542179 FOXB1Q99853 325 aa8.12□□□□□ -1.11
LDHA-220ENST00000542179 CHCHD6Q9BRQ6 235 aa8.12□□□□□ -1.11
LDHA-220ENST00000542179 CENPOQ9BU64 300 aa8.12□□□□□ -1.11
LDHA-220ENST00000542179 ZNF416Q9BWM5 594 aa8.12□□□□□ -1.11
LDHA-220ENST00000542179 TTTY10Q9BZA0 68 aa8.12□□□□□ -1.11
LDHA-220ENST00000542179 NIPAL2Q9H841 368 aa8.12□□□□□ -1.11
LDHA-220ENST00000542179 PNRC2Q9NPJ4 139 aaKnown RBP8.12□□□□□ -1.11
LDHA-220ENST00000542179 SLC7A10Q9NS82 523 aa8.12□□□□□ -1.11
LDHA-220ENST00000542179 TXNL4BQ9NX01 149 aaKnown RBP8.12□□□□□ -1.11
LDHA-220ENST00000542179 LUZP4Q9P127 313 aa8.12□□□□□ -1.11
LDHA-220ENST00000542179 ASH2LQ9UBL3 628 aa8.12□□□□□ -1.11
LDHA-220ENST00000542179 MALT1Q9UDY8 824 aa8.12□□□□□ -1.11
LDHA-220ENST00000542179 CLEC4AQ9UMR7 237 aa8.12□□□□□ -1.11
LDHA-220ENST00000542179 GRIP1Q9Y3R0 1128 aa8.12□□□□□ -1.11
LDHA-220ENST00000542179 PTPRQQ9UMZ3 2332 aa8.12□□□□□ -1.11
LDHA-220ENST00000542179 DNAJC13O75165 2243 aa8.11□□□□□ -1.11
LDHA-220ENST00000542179 TRBV2A0A0J9YWF9 115 aa8.11□□□□□ -1.11
LDHA-220ENST00000542179 LOC100506127A0A0U1RQW1 187 aa8.11□□□□□ -1.11
LDHA-220ENST00000542179 CYSRT1A8MQ03 144 aa8.11□□□□□ -1.11
LDHA-220ENST00000542179 ZNF878C9JN71 531 aa8.11□□□□□ -1.11
LDHA-220ENST00000542179 ZNF587BE7ETH6 402 aa8.11□□□□□ -1.11
LDHA-220ENST00000542179 PSMD9O00233 223 aa8.11□□□□□ -1.11
LDHA-220ENST00000542179 KRT33AO76009 404 aa8.11□□□□□ -1.11
LDHA-220ENST00000542179 EDNRAP25101 427 aa8.11□□□□□ -1.11
LDHA-220ENST00000542179 PSMB10P40306 273 aa8.11□□□□□ -1.11
LDHA-220ENST00000542179 GDI2P50395 445 aaKnown RBP8.11□□□□□ -1.11
LDHA-220ENST00000542179 SH3BGRP55822 239 aaPredicted RBP8.11□□□□□ -1.11
LDHA-220ENST00000542179 NANOS3P60323 173 aaKnown RBP8.11□□□□□ -1.11
LDHA-220ENST00000542179 LSM3P62310 102 aaKnown RBP8.11□□□□□ -1.11
LDHA-220ENST00000542179 KLRB1Q12918 225 aa8.11□□□□□ -1.11
LDHA-220ENST00000542179 ALKBH1Q13686 389 aaKnown RBP8.11□□□□□ -1.11
LDHA-220ENST00000542179 EIF2S3LQ2VIR3 472 aaKnown RBP8.11□□□□□ -1.11
LDHA-220ENST00000542179 SOWAHCQ53LP3 525 aaPredicted RBP8.11□□□□□ -1.11
LDHA-220ENST00000542179 YIF1BQ5BJH7 314 aa8.11□□□□□ -1.11
LDHA-220ENST00000542179 C1orf185Q5T7R7 199 aa8.11□□□□□ -1.11
LDHA-220ENST00000542179 FBXW9Q5XUX1 488 aa8.11□□□□□ -1.11
LDHA-220ENST00000542179 RTL6Q6ICC9 239 aa8.11□□□□□ -1.11
LDHA-220ENST00000542179 ZNF544Q6NX49 715 aa8.11□□□□□ -1.11
LDHA-220ENST00000542179 ZNF585AQ6P3V2 769 aa8.11□□□□□ -1.11
LDHA-220ENST00000542179 CORO6Q6QEF8 472 aa8.11□□□□□ -1.11
LDHA-220ENST00000542179 TMEM91Q6ZNR0 172 aa8.11□□□□□ -1.11
LDHA-220ENST00000542179 CFAP77Q6ZQR2 320 aa8.11□□□□□ -1.11
LDHA-220ENST00000542179 SLC22A24Q8N4F4 322 aa8.11□□□□□ -1.11
LDHA-220ENST00000542179 TEX19Q8NA77 164 aa8.11□□□□□ -1.11
LDHA-220ENST00000542179 C9orf106Q8NAJ2 232 aa8.11□□□□□ -1.11
LDHA-220ENST00000542179 OR10S1Q8NGN2 331 aa8.11□□□□□ -1.11
LDHA-220ENST00000542179 OR6K3Q8NGY3 331 aa8.11□□□□□ -1.11
LDHA-220ENST00000542179 OR2G2Q8NGZ5 317 aa8.11□□□□□ -1.11
LDHA-220ENST00000542179 ABHD4Q8TB40 342 aa8.11□□□□□ -1.11
LDHA-220ENST00000542179 DYNC2LI1Q8TCX1 351 aa8.11□□□□□ -1.11
LDHA-220ENST00000542179 PHYHIPQ92561 330 aa8.11□□□□□ -1.11
LDHA-220ENST00000542179 TMEM203Q969S6 136 aa8.11□□□□□ -1.11
LDHA-220ENST00000542179 SNRNP40Q96DI7 357 aaKnown RBP8.11□□□□□ -1.11
LDHA-220ENST00000542179 TRMT61AQ96FX7 289 aaKnown RBP8.11□□□□□ -1.11
LDHA-220ENST00000542179 ZFP3Q96NJ6 502 aa8.11□□□□□ -1.11
LDHA-220ENST00000542179 DACH2Q96NX9 599 aa8.11□□□□□ -1.11
LDHA-220ENST00000542179 ALKBH3Q96Q83 286 aaPredicted RBP8.11□□□□□ -1.11
LDHA-220ENST00000542179 TMED9Q9BVK6 235 aa8.11□□□□□ -1.11
LDHA-220ENST00000542179 SLC25A18Q9H1K4 315 aa8.11□□□□□ -1.11
LDHA-220ENST00000542179 DCSTAMPQ9H295 470 aa8.11□□□□□ -1.11
LDHA-220ENST00000542179 KCNN2Q9H2S1 579 aa8.11□□□□□ -1.11
LDHA-220ENST00000542179 DDX28Q9NUL7 540 aaKnown RBP8.11□□□□□ -1.11
LDHA-220ENST00000542179 FRRS1LQ9P0K9 344 aa8.11□□□□□ -1.11
LDHA-220ENST00000542179 UPB1Q9UBR1 384 aa8.11□□□□□ -1.11
LDHA-220ENST00000542179 ZNF835Q9Y2P0 537 aa8.11□□□□□ -1.11
LDHA-220ENST00000542179 GSTK1Q9Y2Q3 226 aa8.11□□□□□ -1.11
LDHA-220ENST00000542179 POLR1DQ9Y2S0 133 aa8.11□□□□□ -1.11
LDHA-220ENST00000542179 EMC9Q9Y3B6 208 aa8.11□□□□□ -1.11
LDHA-220ENST00000542179 LRP12Q9Y561 859 aa8.11□□□□□ -1.11
LDHA-220ENST00000542179 R4GMQ9 66 aa8.11□□□□□ -1.11
LDHA-220ENST00000542179 CEP295Q9C0D2 2601 aa8.11□□□□□ -1.11
LDHA-220ENST00000542179 PNMA8CA0A1B0GUJ8 204 aa8.1□□□□□ -1.11
LDHA-220ENST00000542179 TMEM212A6NML5 194 aa8.1□□□□□ -1.11
LDHA-220ENST00000542179 OR4C45A6NMZ5 311 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms