RNA–Protein interactions for RNA: ENST00000542033.5

USP28-210, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 2

Gene USP28, Length 852 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-210ENST00000542033 IRF8Q02556 426 aa2.65□□□□□ -1.99
USP28-210ENST00000542033 TLE4Q04727 773 aa2.65□□□□□ -1.99
USP28-210ENST00000542033 ECH1Q13011 328 aa2.65□□□□□ -1.99
USP28-210ENST00000542033 KIAA0141Q14154 515 aaPredicted RBP2.65□□□□□ -1.99
USP28-210ENST00000542033 LY6DQ14210 128 aa2.65□□□□□ -1.99
USP28-210ENST00000542033 GANABQ14697 944 aaKnown RBP2.65□□□□□ -1.99
USP28-210ENST00000542033 MPPED2Q15777 294 aa2.65□□□□□ -1.99
USP28-210ENST00000542033 CHI3L2Q15782 390 aa2.65□□□□□ -1.99
USP28-210ENST00000542033 DGUOKQ16854 277 aa2.65□□□□□ -1.99
USP28-210ENST00000542033 ZNF630Q2M218 657 aaPredicted RBP2.65□□□□□ -1.99
USP28-210ENST00000542033 C5orf64Q2M2E5 130 aa2.65□□□□□ -1.99
USP28-210ENST00000542033 ZNF699Q32M78 642 aa2.65□□□□□ -1.99
USP28-210ENST00000542033 PARP15Q460N3 678 aa2.65□□□□□ -1.99
USP28-210ENST00000542033 C14orf28Q4W4Y0 310 aa2.65□□□□□ -1.99
USP28-210ENST00000542033 HIKESHIQ53FT3 197 aa2.65□□□□□ -1.99
USP28-210ENST00000542033 SPANXN2Q5MJ10 180 aa2.65□□□□□ -1.99
USP28-210ENST00000542033 DCAF12Q5T6F0 453 aa2.65□□□□□ -1.99
USP28-210ENST00000542033 ANKRD22Q5VYY1 191 aa2.65□□□□□ -1.99
USP28-210ENST00000542033 REP15Q6BDI9 236 aa2.65□□□□□ -1.99
USP28-210ENST00000542033 ACSM5Q6NUN0 579 aa2.65□□□□□ -1.99
USP28-210ENST00000542033 LPCAT3Q6P1A2 487 aa2.65□□□□□ -1.99
USP28-210ENST00000542033 ULK3Q6PHR2 472 aa2.65□□□□□ -1.99
USP28-210ENST00000542033 TEX261Q6UWH6 196 aa2.65□□□□□ -1.99
USP28-210ENST00000542033 BTNL3Q6UXE8 466 aa2.65□□□□□ -1.99
USP28-210ENST00000542033 C3P1Q6ZMU1 363 aa2.65□□□□□ -1.99
USP28-210ENST00000542033 HSD17B13Q7Z5P4 300 aaPredicted RBP2.65□□□□□ -1.99
USP28-210ENST00000542033 SERINC5Q86VE9 423 aa2.65□□□□□ -1.99
USP28-210ENST00000542033 COMMD7Q86VX2 200 aa2.65□□□□□ -1.99
USP28-210ENST00000542033 CATSPER3Q86XQ3 398 aa2.65□□□□□ -1.99
USP28-210ENST00000542033 KATNAL2Q8IYT4 538 aa2.65□□□□□ -1.99
USP28-210ENST00000542033 ARRDC1Q8N5I2 433 aa2.65□□□□□ -1.99
USP28-210ENST00000542033 ZNF283Q8N7M2 679 aa2.65□□□□□ -1.99
USP28-210ENST00000542033 OR2M7Q8NG81 312 aa2.65□□□□□ -1.99
USP28-210ENST00000542033 OR4M2Q8NGB6 313 aa2.65□□□□□ -1.99
USP28-210ENST00000542033 OR5AU1Q8NGC0 362 aa2.65□□□□□ -1.99
USP28-210ENST00000542033 OR13D1Q8NGV5 346 aa2.65□□□□□ -1.99
USP28-210ENST00000542033 OR2L2Q8NH16 312 aa2.65□□□□□ -1.99
USP28-210ENST00000542033 RHOXF1Q8NHV9 184 aa2.65□□□□□ -1.99
USP28-210ENST00000542033 ACTL9Q8TC94 416 aa2.65□□□□□ -1.99
USP28-210ENST00000542033 FBXO25Q8TCJ0 367 aa2.65□□□□□ -1.99
USP28-210ENST00000542033 ACTRT1Q8TDG2 376 aa2.65□□□□□ -1.99
USP28-210ENST00000542033 NPRL2Q8WTW4 380 aa2.65□□□□□ -1.99
USP28-210ENST00000542033 DCAKDQ8WVC6 231 aa2.65□□□□□ -1.99
USP28-210ENST00000542033 PIH1D2Q8WWB5 315 aa2.65□□□□□ -1.99
USP28-210ENST00000542033 RAB1CQ92928 201 aa2.65□□□□□ -1.99
USP28-210ENST00000542033 KIAA1143Q96AT1 154 aaPredicted RBP2.65□□□□□ -1.99
USP28-210ENST00000542033 CCDC124Q96CT7 223 aaKnown RBP2.65□□□□□ -1.99
USP28-210ENST00000542033 HAVCR1Q96D42 359 aa2.65□□□□□ -1.99
USP28-210ENST00000542033 RAB3CQ96E17 227 aa2.65□□□□□ -1.99
USP28-210ENST00000542033 SMIM12Q96EX1 92 aa2.65□□□□□ -1.99
USP28-210ENST00000542033 DCUN1D1Q96GG9 259 aa2.65□□□□□ -1.99
USP28-210ENST00000542033 NARS2Q96I59 477 aaKnown RBP2.65□□□□□ -1.99
USP28-210ENST00000542033 PACRGQ96M98 296 aaPredicted RBP2.65□□□□□ -1.99
USP28-210ENST00000542033 GLT1D1Q96MS3 346 aa2.65□□□□□ -1.99
USP28-210ENST00000542033 NOL4LQ96MY1 436 aaPredicted RBP2.65□□□□□ -1.99
USP28-210ENST00000542033 CPXM1Q96SM3 734 aa2.65□□□□□ -1.99
USP28-210ENST00000542033 NIPSNAP1Q9BPW8 284 aa2.65□□□□□ -1.99
USP28-210ENST00000542033 AIF1LQ9BQI0 150 aa2.65□□□□□ -1.99
USP28-210ENST00000542033 EBF4Q9BQW3 602 aa2.65□□□□□ -1.99
USP28-210ENST00000542033 PYGO2Q9BRQ0 406 aa2.65□□□□□ -1.99
USP28-210ENST00000542033 PCBD2Q9H0N5 130 aa2.65□□□□□ -1.99
USP28-210ENST00000542033 ING2Q9H160 280 aa2.65□□□□□ -1.99
USP28-210ENST00000542033 POLR3FQ9H1D9 316 aaPredicted RBP2.65□□□□□ -1.99
USP28-210ENST00000542033 VCX2Q9H322 139 aa2.65□□□□□ -1.99
USP28-210ENST00000542033 TRABDQ9H4I3 376 aa2.65□□□□□ -1.99
USP28-210ENST00000542033 AUNIPQ9H7T9 357 aa2.65□□□□□ -1.99
USP28-210ENST00000542033 NHEJ1Q9H9Q4 299 aaPredicted RBP2.65□□□□□ -1.99
USP28-210ENST00000542033 CCNB1IP1Q9NPC3 277 aa2.65□□□□□ -1.99
USP28-210ENST00000542033 FAM49BQ9NUQ9 324 aa2.65□□□□□ -1.99
USP28-210ENST00000542033 PAK1IP1Q9NWT1 392 aaPredicted RBP2.65□□□□□ -1.99
USP28-210ENST00000542033 CLEC5AQ9NY25 188 aa2.65□□□□□ -1.99
USP28-210ENST00000542033 DUX4Q9UBX2 424 aa2.65□□□□□ -1.99
USP28-210ENST00000542033 SEC14L4Q9UDX3 406 aa2.65□□□□□ -1.99
USP28-210ENST00000542033 OR12D3Q9UGF7 316 aa2.65□□□□□ -1.99
USP28-210ENST00000542033 PCYOX1Q9UHG3 505 aa2.65□□□□□ -1.99
USP28-210ENST00000542033 OPN4Q9UHM6 478 aa2.65□□□□□ -1.99
USP28-210ENST00000542033 RWDD2AQ9UIY3 292 aa2.65□□□□□ -1.99
USP28-210ENST00000542033 C3orf18Q9UK00 162 aa2.65□□□□□ -1.99
USP28-210ENST00000542033 KLK13Q9UKR3 277 aa2.65□□□□□ -1.99
USP28-210ENST00000542033 FBXO5Q9UKT4 447 aa2.65□□□□□ -1.99
USP28-210ENST00000542033 IKZF3Q9UKT9 509 aa2.65□□□□□ -1.99
USP28-210ENST00000542033 PSG11Q9UQ72 335 aa2.65□□□□□ -1.99
USP28-210ENST00000542033 SLC22A13Q9Y226 551 aa2.65□□□□□ -1.99
USP28-210ENST00000542033 RNF6Q9Y252 685 aa2.65□□□□□ -1.99
USP28-210ENST00000542033 MRPS33Q9Y291 106 aaKnown RBP2.65□□□□□ -1.99
USP28-210ENST00000542033 KLHDC2Q9Y2U9 406 aa2.65□□□□□ -1.99
USP28-210ENST00000542033 PRG3Q9Y2Y8 225 aaPredicted RBP2.65□□□□□ -1.99
USP28-210ENST00000542033 OR51B4Q9Y5P0 310 aa2.65□□□□□ -1.99
USP28-210ENST00000542033 U3KQ87 197 aa2.65□□□□□ -1.99
USP28-210ENST00000542033 RIC1Q4ADV7 1423 aa2.65□□□□□ -1.99
USP28-210ENST00000542033 ADAMTS12P58397 1594 aa2.65□□□□□ -1.99
USP28-210ENST00000542033 MYH10P35580 1976 aa2.65□□□□□ -1.99
USP28-210ENST00000542033 USP42Q9H9J4 1324 aaKnown RBP2.65□□□□□ -1.99
USP28-210ENST00000542033 SPHKAPQ2M3C7 1700 aa2.65□□□□□ -1.99
USP28-210ENST00000542033 ABCA6Q8N139 1617 aa2.64□□□□□ -1.99
USP28-210ENST00000542033 MYH4Q9Y623 1939 aa2.64□□□□□ -1.99
USP28-210ENST00000542033 ABCC6O95255 1503 aa2.64□□□□□ -1.99
USP28-210ENST00000542033 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP2.64□□□□□ -1.99
USP28-210ENST00000542033 IGHV4-30-2A0A087WSY4 118 aa2.64□□□□□ -1.99
USP28-210ENST00000542033 HSFX4A0A1B0GTS1 333 aaPredicted RBP2.64□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms