RNA–Protein interactions for RNA: ENST00000541363.5

HMGA2-210, Transcript of high mobility group AT-hook 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA2, Length 8,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-210ENST00000541363 PPP2CBP62714 309 aa14.09□□□□□ -0.15
HMGA2-210ENST00000541363 LEXMQ3ZCV2 418 aa14.09□□□□□ -0.15
HMGA2-210ENST00000541363 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa14.09□□□□□ -0.15
HMGA2-210ENST00000541363 C17orf78Q8N4C9 275 aa14.09□□□□□ -0.15
HMGA2-210ENST00000541363 MDGA1Q8NFP4 955 aa14.09□□□□□ -0.15
HMGA2-210ENST00000541363 ROBO1Q9Y6N7 1651 aa14.09□□□□□ -0.15
HMGA2-210ENST00000541363 GCGP01275 180 aa14.09□□□□□ -0.15
HMGA2-210ENST00000541363 FKBP2P26885 142 aaKnown RBP14.09□□□□□ -0.15
HMGA2-210ENST00000541363 FOXA1P55317 472 aa14.09□□□□□ -0.15
HMGA2-210ENST00000541363 OR51F2Q8NH61 342 aa14.09□□□□□ -0.15
HMGA2-210ENST00000541363 PLEKHA2Q9HB19 425 aa14.09□□□□□ -0.15
HMGA2-210ENST00000541363 GDF2Q9UK05 429 aaPredicted RBP14.09□□□□□ -0.15
HMGA2-210ENST00000541363 GPR45Q9Y5Y3 372 aa14.09□□□□□ -0.15
HMGA2-210ENST00000541363 MST1RQ04912 1400 aa14.09□□□□□ -0.15
HMGA2-210ENST00000541363 SHROOM3Q8TF72 1996 aa14.09□□□□□ -0.15
HMGA2-210ENST00000541363 DGAT2L7PQ6IED9 249 aa14.09□□□□□ -0.15
HMGA2-210ENST00000541363 PRSS3P2Q8NHM4 247 aa14.09□□□□□ -0.15
HMGA2-210ENST00000541363 AKR7LQ8NHP1 331 aa14.09□□□□□ -0.15
HMGA2-210ENST00000541363 DTD1Q8TEA8 209 aa14.09□□□□□ -0.15
HMGA2-210ENST00000541363 ISG20Q96AZ6 181 aaKnown RBP14.09□□□□□ -0.15
HMGA2-210ENST00000541363 CMBLQ96DG6 245 aa14.09□□□□□ -0.15
HMGA2-210ENST00000541363 ATP5SQ99766 215 aa14.09□□□□□ -0.15
HMGA2-210ENST00000541363 NDRG4Q9ULP0 352 aaKnown RBP14.09□□□□□ -0.15
HMGA2-210ENST00000541363 AQP8O94778 261 aa14.09□□□□□ -0.15
HMGA2-210ENST00000541363 SPCS3P61009 180 aa14.09□□□□□ -0.15
HMGA2-210ENST00000541363 EXT1Q16394 746 aa14.09□□□□□ -0.15
HMGA2-210ENST00000541363 SLC38A9Q8NBW4 561 aa14.09□□□□□ -0.15
HMGA2-210ENST00000541363 ANKRD26Q9UPS8 1709 aa14.09□□□□□ -0.15
HMGA2-210ENST00000541363 NEURL1O76050 574 aa14.09□□□□□ -0.15
HMGA2-210ENST00000541363 FPR3P25089 353 aa14.09□□□□□ -0.15
HMGA2-210ENST00000541363 IRS1P35568 1242 aa14.09□□□□□ -0.15
HMGA2-210ENST00000541363 TGFBR1P36897 503 aa14.09□□□□□ -0.15
HMGA2-210ENST00000541363 Q3ZCU0 254 aa14.09□□□□□ -0.15
HMGA2-210ENST00000541363 MT-ATP6P00846 226 aa14.08□□□□□ -0.15
HMGA2-210ENST00000541363 RPL12P30050 165 aaKnown RBP14.08□□□□□ -0.15
HMGA2-210ENST00000541363 LSRQ86X29 649 aaPredicted RBP14.08□□□□□ -0.15
HMGA2-210ENST00000541363 SLC35B4Q969S0 331 aa14.08□□□□□ -0.15
HMGA2-210ENST00000541363 TMEM231Q9H6L2 316 aa14.08□□□□□ -0.15
HMGA2-210ENST00000541363 GPR173Q9NS66 373 aa14.08□□□□□ -0.15
HMGA2-210ENST00000541363 ZNF354AO60765 605 aaPredicted RBP14.08□□□□□ -0.16
HMGA2-210ENST00000541363 MAT1AQ00266 395 aaKnown RBP14.08□□□□□ -0.16
HMGA2-210ENST00000541363 OR5D13Q8NGL4 314 aa14.08□□□□□ -0.16
HMGA2-210ENST00000541363 PSORS1C1Q9UIG5 152 aa14.08□□□□□ -0.16
HMGA2-210ENST00000541363 FER1L4A9Z1Z3 1794 aa14.08□□□□□ -0.16
HMGA2-210ENST00000541363 SLC5A2P31639 672 aa14.08□□□□□ -0.16
HMGA2-210ENST00000541363 DDOSTP39656 456 aa14.08□□□□□ -0.16
HMGA2-210ENST00000541363 SELENOFO60613 162 aa14.08□□□□□ -0.16
HMGA2-210ENST00000541363 DUS4LO95620 317 aaKnown RBP14.08□□□□□ -0.16
HMGA2-210ENST00000541363 GALR1P47211 349 aa14.08□□□□□ -0.16
HMGA2-210ENST00000541363 UQCRFS1P47985 274 aa14.08□□□□□ -0.16
HMGA2-210ENST00000541363 SRP9P49458 86 aaKnown RBP14.08□□□□□ -0.16
HMGA2-210ENST00000541363 FOXK2Q01167 660 aa14.08□□□□□ -0.16
HMGA2-210ENST00000541363 ZNF141Q15928 474 aa14.08□□□□□ -0.16
HMGA2-210ENST00000541363 TTC9Q92623 222 aa14.08□□□□□ -0.16
HMGA2-210ENST00000541363 TRDV1A0A1B0GX56 115 aa14.08□□□□□ -0.16
HMGA2-210ENST00000541363 MS4A18H0YCH9 400 aa14.08□□□□□ -0.16
HMGA2-210ENST00000541363 DNASE2O00115 360 aaPredicted RBP14.08□□□□□ -0.16
HMGA2-210ENST00000541363 TTRP02766 147 aa14.08□□□□□ -0.16
HMGA2-210ENST00000541363 CD200P41217 278 aa14.08□□□□□ -0.16
HMGA2-210ENST00000541363 CLEC12BQ2HXU8 276 aa14.08□□□□□ -0.16
HMGA2-210ENST00000541363 MS4A18Q3C1V0 323 aa14.08□□□□□ -0.16
HMGA2-210ENST00000541363 GPRIN1Q7Z2K8 1008 aa14.08□□□□□ -0.16
HMGA2-210ENST00000541363 TMEM208Q9BTX3 173 aa14.08□□□□□ -0.16
HMGA2-210ENST00000541363 GJA4P35212 333 aa14.08□□□□□ -0.16
HMGA2-210ENST00000541363 OR3A1P47881 315 aa14.08□□□□□ -0.16
HMGA2-210ENST00000541363 ZNF385BQ569K4 471 aa14.08□□□□□ -0.16
HMGA2-210ENST00000541363 ATG101Q9BSB4 218 aa14.08□□□□□ -0.16
HMGA2-210ENST00000541363 OCEL1Q9H607 264 aa14.08□□□□□ -0.16
HMGA2-210ENST00000541363 LSM2Q9Y333 95 aaKnown RBP14.08□□□□□ -0.16
HMGA2-210ENST00000541363 SNX11Q9Y5W9 270 aa14.08□□□□□ -0.16
HMGA2-210ENST00000541363 MEIKINA0A087WXM9 373 aa14.07□□□□□ -0.16
HMGA2-210ENST00000541363 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.07□□□□□ -0.16
HMGA2-210ENST00000541363 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.07□□□□□ -0.16
HMGA2-210ENST00000541363 H0YGG7 62 aa14.07□□□□□ -0.16
HMGA2-210ENST00000541363 CYB561P49447 251 aa14.07□□□□□ -0.16
HMGA2-210ENST00000541363 BATF2Q8N1L9 274 aa14.07□□□□□ -0.16
HMGA2-210ENST00000541363 BADQ92934 168 aa14.07□□□□□ -0.16
HMGA2-210ENST00000541363 CTSFQ9UBX1 484 aa14.07□□□□□ -0.16
HMGA2-210ENST00000541363 A3GALT2U3KPV4 340 aa14.07□□□□□ -0.16
HMGA2-210ENST00000541363 ABCD3P28288 659 aa14.07□□□□□ -0.16
HMGA2-210ENST00000541363 RPS19P39019 145 aaKnown RBP14.07□□□□□ -0.16
HMGA2-210ENST00000541363 TAS2R60P59551 318 aa14.07□□□□□ -0.16
HMGA2-210ENST00000541363 Q56UQ5 140 aa14.07□□□□□ -0.16
HMGA2-210ENST00000541363 MED25Q71SY5 747 aa14.07□□□□□ -0.16
HMGA2-210ENST00000541363 PRSS45Q7RTY3 260 aa14.07□□□□□ -0.16
HMGA2-210ENST00000541363 OLIG1Q8TAK6 271 aa14.07□□□□□ -0.16
HMGA2-210ENST00000541363 FAM117AQ9C073 453 aa14.07□□□□□ -0.16
HMGA2-210ENST00000541363 NID2Q14112 1375 aa14.07□□□□□ -0.16
HMGA2-210ENST00000541363 M0R143 59 aa14.07□□□□□ -0.16
HMGA2-210ENST00000541363 PSMB6P28072 239 aa14.07□□□□□ -0.16
HMGA2-210ENST00000541363 RPL24P83731 157 aaKnown RBP14.07□□□□□ -0.16
HMGA2-210ENST00000541363 CMTM4Q8IZR5 234 aa14.07□□□□□ -0.16
HMGA2-210ENST00000541363 UBALD1Q8TB05 177 aa14.07□□□□□ -0.16
HMGA2-210ENST00000541363 NDUFB11Q9NX14 153 aa14.07□□□□□ -0.16
HMGA2-210ENST00000541363 CLEC5AQ9NY25 188 aa14.07□□□□□ -0.16
HMGA2-210ENST00000541363 NDRG3Q9UGV2 375 aa14.07□□□□□ -0.16
HMGA2-210ENST00000541363 DIMT1Q9UNQ2 313 aaKnown RBP14.07□□□□□ -0.16
HMGA2-210ENST00000541363 SIRPB1O00241 398 aa14.07□□□□□ -0.16
HMGA2-210ENST00000541363 ACOT8O14734 319 aa14.07□□□□□ -0.16
HMGA2-210ENST00000541363 HPP00738 406 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms