RNA–Protein interactions for RNA: ENST00000540725.5

SNHG1-213, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 1 (best) BASIC

Gene SNHG1, Length 1,374 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-213ENST00000540725 FAM122BQ7Z309 247 aa11.91□□□□□ -0.5
SNHG1-213ENST00000540725 DEFB108BQ8NET1 73 aa11.91□□□□□ -0.5
SNHG1-213ENST00000540725 SGMS2Q8NHU3 365 aa11.91□□□□□ -0.5
SNHG1-213ENST00000540725 ITLN1Q8WWA0 313 aa11.91□□□□□ -0.5
SNHG1-213ENST00000540725 SLC7A6Q92536 515 aa11.91□□□□□ -0.5
SNHG1-213ENST00000540725 POP5Q969H6 163 aaKnown RBP11.91□□□□□ -0.5
SNHG1-213ENST00000540725 HSH2DQ96JZ2 352 aa11.91□□□□□ -0.5
SNHG1-213ENST00000540725 NDEL1Q9GZM8 345 aa11.91□□□□□ -0.5
SNHG1-213ENST00000540725 NTN4Q9HB63 628 aa11.91□□□□□ -0.5
SNHG1-213ENST00000540725 PATZ1Q9HBE1 687 aaKnown RBP11.91□□□□□ -0.5
SNHG1-213ENST00000540725 MMP26Q9NRE1 261 aa11.91□□□□□ -0.5
SNHG1-213ENST00000540725 DDX28Q9NUL7 540 aaKnown RBP11.91□□□□□ -0.5
SNHG1-213ENST00000540725 PLEK2Q9NYT0 353 aa11.91□□□□□ -0.5
SNHG1-213ENST00000540725 PPP1R3CQ9UQK1 317 aa11.91□□□□□ -0.5
SNHG1-213ENST00000540725 POLR3KQ9Y2Y1 108 aaPredicted RBP11.91□□□□□ -0.5
SNHG1-213ENST00000540725 PPIAL4AQ9Y536 164 aa11.91□□□□□ -0.5
SNHG1-213ENST00000540725 GSTA4O15217 222 aa11.9□□□□□ -0.5
SNHG1-213ENST00000540725 SURF4O15260 269 aa11.9□□□□□ -0.5
SNHG1-213ENST00000540725 ERFP50548 548 aa11.9□□□□□ -0.5
SNHG1-213ENST00000540725 SEC61A1P61619 476 aaKnown RBP11.9□□□□□ -0.5
SNHG1-213ENST00000540725 BTG1P62324 171 aa11.9□□□□□ -0.5
SNHG1-213ENST00000540725 KRR1Q13601 381 aaKnown RBP11.9□□□□□ -0.5
SNHG1-213ENST00000540725 ZMYND11Q15326 602 aa11.9□□□□□ -0.5
SNHG1-213ENST00000540725 ARMCX4Q5H9R4 360 aa11.9□□□□□ -0.5
SNHG1-213ENST00000540725 OTPQ5XKR4 325 aa11.9□□□□□ -0.5
SNHG1-213ENST00000540725 C1orf94Q6P1W5 598 aa11.9□□□□□ -0.5
SNHG1-213ENST00000540725 LRRC28Q86X40 367 aaPredicted RBP11.9□□□□□ -0.5
SNHG1-213ENST00000540725 RASD2Q96D21 266 aa11.9□□□□□ -0.5
SNHG1-213ENST00000540725 HAVCR1Q96D42 359 aa11.9□□□□□ -0.5
SNHG1-213ENST00000540725 COG8Q96MW5 612 aa11.9□□□□□ -0.5
SNHG1-213ENST00000540725 SIGLEC11Q96RL6 698 aa11.9□□□□□ -0.5
SNHG1-213ENST00000540725 SYT4Q9H2B2 425 aa11.9□□□□□ -0.5
SNHG1-213ENST00000540725 ANKRD19PQ9H560 264 aa11.9□□□□□ -0.5
SNHG1-213ENST00000540725 RERGLQ9H628 205 aa11.9□□□□□ -0.5
SNHG1-213ENST00000540725 ASH2LQ9UBL3 628 aa11.9□□□□□ -0.5
SNHG1-213ENST00000540725 IL19Q9UHD0 177 aa11.9□□□□□ -0.5
SNHG1-213ENST00000540725 TMEM5Q9Y2B1 443 aa11.9□□□□□ -0.5
SNHG1-213ENST00000540725 AUP1Q9Y679 476 aa11.9□□□□□ -0.5
SNHG1-213ENST00000540725 OR6C6A6NF89 314 aa11.89□□□□□ -0.51
SNHG1-213ENST00000540725 A8MXK9 166 aa11.89□□□□□ -0.51
SNHG1-213ENST00000540725 F5H0A9 414 aaPredicted RBP11.89□□□□□ -0.51
SNHG1-213ENST00000540725 TRAPPC2LH3BP13 241 aa11.89□□□□□ -0.51
SNHG1-213ENST00000540725 NME4O00746 187 aa11.89□□□□□ -0.51
SNHG1-213ENST00000540725 SLC16A7O60669 478 aa11.89□□□□□ -0.51
SNHG1-213ENST00000540725 NDUFB2O95178 105 aa11.89□□□□□ -0.51
SNHG1-213ENST00000540725 SERPINA1P01009 418 aa11.89□□□□□ -0.51
SNHG1-213ENST00000540725 ZNF12P17014 697 aa11.89□□□□□ -0.51
SNHG1-213ENST00000540725 SLC6A9P48067 706 aa11.89□□□□□ -0.51
SNHG1-213ENST00000540725 SLC7A2P52569 658 aa11.89□□□□□ -0.51
SNHG1-213ENST00000540725 GUCY1A3Q02108 690 aa11.89□□□□□ -0.51
SNHG1-213ENST00000540725 ZNF154Q13106 437 aa11.89□□□□□ -0.51
SNHG1-213ENST00000540725 TUSC1Q2TAM9 212 aa11.89□□□□□ -0.51
SNHG1-213ENST00000540725 RBMS3Q6XE24 437 aaKnown RBP11.89□□□□□ -0.51
SNHG1-213ENST00000540725 CYP4Z1Q86W10 505 aa11.89□□□□□ -0.51
SNHG1-213ENST00000540725 SIGLECL1Q8N7X8 197 aa11.89□□□□□ -0.51
SNHG1-213ENST00000540725 RP9Q8TA86 221 aaKnown RBP11.89□□□□□ -0.51
SNHG1-213ENST00000540725 SLC7A13Q8TCU3 470 aa11.89□□□□□ -0.51
SNHG1-213ENST00000540725 PTP4A1Q93096 173 aa11.89□□□□□ -0.51
SNHG1-213ENST00000540725 FAM46AQ96IP4 442 aaKnown RBP11.89□□□□□ -0.51
SNHG1-213ENST00000540725 OR2V2Q96R30 315 aa11.89□□□□□ -0.51
SNHG1-213ENST00000540725 NMNAT1Q9HAN9 279 aaPredicted RBP11.89□□□□□ -0.51
SNHG1-213ENST00000540725 ZNF69Q9UC07 566 aa11.89□□□□□ -0.51
SNHG1-213ENST00000540725 NUP50Q9UKX7 468 aa11.89□□□□□ -0.51
SNHG1-213ENST00000540725 COA3Q9Y2R0 106 aaPredicted RBP11.89□□□□□ -0.51
SNHG1-213ENST00000540725 ENPP4Q9Y6X5 453 aa11.89□□□□□ -0.51
SNHG1-213ENST00000540725 TRRAPQ9Y4A5 3859 aa11.89□□□□□ -0.51
SNHG1-213ENST00000540725 IMPA2O14732 288 aa11.88□□□□□ -0.51
SNHG1-213ENST00000540725 PTP4A3O75365 173 aa11.88□□□□□ -0.51
SNHG1-213ENST00000540725 KHDRBS3O75525 346 aaKnown RBP11.88□□□□□ -0.51
SNHG1-213ENST00000540725 DBHP09172 617 aa11.88□□□□□ -0.51
SNHG1-213ENST00000540725 COX4I1P13073 169 aa11.88□□□□□ -0.51
SNHG1-213ENST00000540725 RAC2P15153 192 aa11.88□□□□□ -0.51
SNHG1-213ENST00000540725 SDHAP31040 664 aa11.88□□□□□ -0.51
SNHG1-213ENST00000540725 MDH2P40926 338 aaKnown RBP11.88□□□□□ -0.51
SNHG1-213ENST00000540725 GSK3BP49841 420 aa11.88□□□□□ -0.51
SNHG1-213ENST00000540725 MMP16P51512 607 aa11.88□□□□□ -0.51
SNHG1-213ENST00000540725 LSM6P62312 80 aaKnown RBP11.88□□□□□ -0.51
SNHG1-213ENST00000540725 CCDC92Q53HC0 331 aaPredicted RBP11.88□□□□□ -0.51
SNHG1-213ENST00000540725 ESCO2Q56NI9 601 aa11.88□□□□□ -0.51
SNHG1-213ENST00000540725 KLF17Q5JT82 389 aaPredicted RBP11.88□□□□□ -0.51
SNHG1-213ENST00000540725 GPR139Q6DWJ6 353 aa11.88□□□□□ -0.51
SNHG1-213ENST00000540725 DOK3Q7L591 496 aa11.88□□□□□ -0.51
SNHG1-213ENST00000540725 TSEN54Q7Z6J9 526 aaKnown RBP11.88□□□□□ -0.51
SNHG1-213ENST00000540725 GLB1L2Q8IW92 636 aa11.88□□□□□ -0.51
SNHG1-213ENST00000540725 OR5AS1Q8N127 324 aa11.88□□□□□ -0.51
SNHG1-213ENST00000540725 OR1F12Q8NHA8 337 aa11.88□□□□□ -0.51
SNHG1-213ENST00000540725 MRI1Q9BV20 369 aa11.88□□□□□ -0.51
SNHG1-213ENST00000540725 NRIP3Q9NQ35 241 aa11.88□□□□□ -0.51
SNHG1-213ENST00000540725 PTTG3PQ9NZH4 202 aa11.88□□□□□ -0.51
SNHG1-213ENST00000540725 VSX1Q9NZR4 365 aaPredicted RBP11.88□□□□□ -0.51
SNHG1-213ENST00000540725 ATPIF1Q9UII2 106 aa11.88□□□□□ -0.51
SNHG1-213ENST00000540725 SIGLEC7Q9Y286 467 aa11.88□□□□□ -0.51
SNHG1-213ENST00000540725 INSIG2Q9Y5U4 225 aa11.88□□□□□ -0.51
SNHG1-213ENST00000540725 TMEM178BH3BS89 294 aa11.87□□□□□ -0.51
SNHG1-213ENST00000540725 J3QW42 95 aa11.87□□□□□ -0.51
SNHG1-213ENST00000540725 SOCS2O14508 198 aa11.87□□□□□ -0.51
SNHG1-213ENST00000540725 RER1O15258 196 aa11.87□□□□□ -0.51
SNHG1-213ENST00000540725 H1F0P07305 194 aaKnown RBP11.87□□□□□ -0.51
SNHG1-213ENST00000540725 HKR1P10072 659 aa11.87□□□□□ -0.51
SNHG1-213ENST00000540725 RGS6P49758 472 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 110.5 ms