RNA–Protein interactions for RNA: ENST00000540166.5

DDB1-217, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 3,906 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-217ENST00000540166 SPACA1Q9HBV2 294 aa7.88□□□□□ -1.15
DDB1-217ENST00000540166 EXOSC3Q9NQT5 275 aaKnown RBP7.88□□□□□ -1.15
DDB1-217ENST00000540166 CARHSP1Q9Y2V2 147 aaKnown RBP7.88□□□□□ -1.15
DDB1-217ENST00000540166 MEMO1Q9Y316 297 aa7.88□□□□□ -1.15
DDB1-217ENST00000540166 ETV7Q9Y603 341 aa7.88□□□□□ -1.15
DDB1-217ENST00000540166 A0A1B0GV50 99 aa7.88□□□□□ -1.15
DDB1-217ENST00000540166 PMS2P1A4D2B8 440 aa7.88□□□□□ -1.15
DDB1-217ENST00000540166 DCTN6O00399 190 aa7.88□□□□□ -1.15
DDB1-217ENST00000540166 PHOX2AO14813 284 aa7.88□□□□□ -1.15
DDB1-217ENST00000540166 YIF1AO95070 293 aa7.88□□□□□ -1.15
DDB1-217ENST00000540166 IGHV2-70P01814 119 aa7.88□□□□□ -1.15
DDB1-217ENST00000540166 CALCBP10092 127 aa7.88□□□□□ -1.15
DDB1-217ENST00000540166 TAS2R60P59551 318 aa7.88□□□□□ -1.15
DDB1-217ENST00000540166 CDK5R1Q15078 307 aa7.88□□□□□ -1.15
DDB1-217ENST00000540166 DECR1Q16698 335 aa7.88□□□□□ -1.15
DDB1-217ENST00000540166 TEX30Q5JUR7 227 aa7.88□□□□□ -1.15
DDB1-217ENST00000540166 SLC35F2Q8IXU6 374 aa7.88□□□□□ -1.15
DDB1-217ENST00000540166 POMGNT2Q8NAT1 580 aa7.88□□□□□ -1.15
DDB1-217ENST00000540166 DOK4Q8TEW6 326 aa7.88□□□□□ -1.15
DDB1-217ENST00000540166 MIB2Q96AX9 1013 aa7.88□□□□□ -1.15
DDB1-217ENST00000540166 SLC25A36Q96CQ1 311 aa7.88□□□□□ -1.15
DDB1-217ENST00000540166 ZNF649Q9BS31 505 aa7.88□□□□□ -1.15
DDB1-217ENST00000540166 PLEKHA1Q9HB21 404 aa7.88□□□□□ -1.15
DDB1-217ENST00000540166 SIDT1Q9NXL6 827 aaKnown RBP7.88□□□□□ -1.15
DDB1-217ENST00000540166 ZNF230Q9UIE0 474 aaPredicted RBP7.88□□□□□ -1.15
DDB1-217ENST00000540166 FOXJ3Q9UPW0 622 aa7.88□□□□□ -1.15
DDB1-217ENST00000540166 CSAG2Q9Y5P2 127 aa7.88□□□□□ -1.15
DDB1-217ENST00000540166 PUS1Q9Y606 427 aaKnown RBP eCLIP7.88□□□□□ -1.15
DDB1-217ENST00000540166 PTPRDP23468 1912 aa7.87□□□□□ -1.15
DDB1-217ENST00000540166 DUXAA6NLW8 204 aa7.87□□□□□ -1.15
DDB1-217ENST00000540166 H2AFB1P0C5Y9 115 aa7.87□□□□□ -1.15
DDB1-217ENST00000540166 TBXA2RP21731 343 aa7.87□□□□□ -1.15
DDB1-217ENST00000540166 MST1P26927 711 aa7.87□□□□□ -1.15
DDB1-217ENST00000540166 MAP3K8P41279 467 aa7.87□□□□□ -1.15
DDB1-217ENST00000540166 ACY1Q03154 408 aa7.87□□□□□ -1.15
DDB1-217ENST00000540166 INPP5JQ15735 1006 aaPredicted RBP7.87□□□□□ -1.15
DDB1-217ENST00000540166 C2orf68Q2NKX9 166 aa7.87□□□□□ -1.15
DDB1-217ENST00000540166 HIST2H3PS2Q5TEC6 136 aa7.87□□□□□ -1.15
DDB1-217ENST00000540166 HIST2H3AQ71DI3 136 aa7.87□□□□□ -1.15
DDB1-217ENST00000540166 GALNT16Q8N428 558 aa7.87□□□□□ -1.15
DDB1-217ENST00000540166 MORN4Q8NDC4 146 aa7.87□□□□□ -1.15
DDB1-217ENST00000540166 NUP43Q8NFH3 380 aa7.87□□□□□ -1.15
DDB1-217ENST00000540166 HIST1H2BAQ96A08 127 aa7.87□□□□□ -1.15
DDB1-217ENST00000540166 C16orf58Q96GQ5 468 aa7.87□□□□□ -1.15
DDB1-217ENST00000540166 KIRREL1Q96J84 757 aa7.87□□□□□ -1.15
DDB1-217ENST00000540166 DMRTA2Q96SC8 542 aa7.87□□□□□ -1.15
DDB1-217ENST00000540166 PBDC1Q9BVG4 233 aa7.87□□□□□ -1.15
DDB1-217ENST00000540166 A0A087WZY1 265 aa7.87□□□□□ -1.15
DDB1-217ENST00000540166 P2RX6O15547 441 aa7.87□□□□□ -1.15
DDB1-217ENST00000540166 VEGFDO43915 354 aa7.87□□□□□ -1.15
DDB1-217ENST00000540166 OR2C1O95371 312 aa7.87□□□□□ -1.15
DDB1-217ENST00000540166 PMP2P02689 132 aa7.87□□□□□ -1.15
DDB1-217ENST00000540166 DAOP14920 347 aa7.87□□□□□ -1.15
DDB1-217ENST00000540166 PSMB6P28072 239 aa7.87□□□□□ -1.15
DDB1-217ENST00000540166 FRKP42685 505 aaPredicted RBP7.87□□□□□ -1.15
DDB1-217ENST00000540166 PLA2G7Q13093 441 aa7.87□□□□□ -1.15
DDB1-217ENST00000540166 EIF2B1Q14232 305 aaKnown RBP7.87□□□□□ -1.15
DDB1-217ENST00000540166 C1orf189Q5VU69 101 aa7.87□□□□□ -1.15
DDB1-217ENST00000540166 OR4C11Q6IEV9 310 aa7.87□□□□□ -1.15
DDB1-217ENST00000540166 JMJD6Q6NYC1 403 aaPredicted RBP7.87□□□□□ -1.15
DDB1-217ENST00000540166 ARHGAP11AQ6P4F7 1023 aa7.87□□□□□ -1.15
DDB1-217ENST00000540166 OR5AK2Q8NH90 309 aa7.87□□□□□ -1.15
DDB1-217ENST00000540166 GTF3AQ92664 365 aaKnown RBP7.87□□□□□ -1.15
DDB1-217ENST00000540166 HCAR1Q9BXC0 346 aa7.87□□□□□ -1.15
DDB1-217ENST00000540166 ULBP3Q9BZM4 244 aa7.87□□□□□ -1.15
DDB1-217ENST00000540166 SELENOIQ9C0D9 397 aa7.87□□□□□ -1.15
DDB1-217ENST00000540166 PCBD2Q9H0N5 130 aa7.87□□□□□ -1.15
DDB1-217ENST00000540166 SEC61A2Q9H9S3 476 aa7.87□□□□□ -1.15
DDB1-217ENST00000540166 ADAP2Q9NPF8 381 aa7.87□□□□□ -1.15
DDB1-217ENST00000540166 ZNF223Q9UK11 482 aaPredicted RBP7.87□□□□□ -1.15
DDB1-217ENST00000540166 TNFSF18Q9UNG2 199 aa7.87□□□□□ -1.15
DDB1-217ENST00000540166 CXorf51AA0A1B0GTR3 108 aa7.87□□□□□ -1.15
DDB1-217ENST00000540166 TVP23AA6NH52 213 aa7.87□□□□□ -1.15
DDB1-217ENST00000540166 H7C417 338 aa7.87□□□□□ -1.15
DDB1-217ENST00000540166 ACTL6AO96019 429 aa7.87□□□□□ -1.15
DDB1-217ENST00000540166 HLA-DQA2P01906 255 aa7.87□□□□□ -1.15
DDB1-217ENST00000540166 ACP1P24666 158 aa7.87□□□□□ -1.15
DDB1-217ENST00000540166 CAMLGP49069 296 aa7.87□□□□□ -1.15
DDB1-217ENST00000540166 SPCS3P61009 180 aa7.87□□□□□ -1.15
DDB1-217ENST00000540166 PDE7AQ13946 482 aa7.87□□□□□ -1.15
DDB1-217ENST00000540166 ZNF345Q14585 488 aa7.87□□□□□ -1.15
DDB1-217ENST00000540166 NKAIN2Q5VXU1 208 aa7.87□□□□□ -1.15
DDB1-217ENST00000540166 SDR9C7Q8NEX9 313 aa7.87□□□□□ -1.15
DDB1-217ENST00000540166 OR1J2Q8NGS2 313 aa7.87□□□□□ -1.15
DDB1-217ENST00000540166 TMEM239Q8WW34 195 aa7.87□□□□□ -1.15
DDB1-217ENST00000540166 TAAR9Q96RI9 348 aa7.87□□□□□ -1.15
DDB1-217ENST00000540166 JAM3Q9BX67 310 aa7.87□□□□□ -1.15
DDB1-217ENST00000540166 CST11Q9H112 138 aa7.87□□□□□ -1.15
DDB1-217ENST00000540166 ALX4Q9H161 411 aaPredicted RBP7.87□□□□□ -1.15
DDB1-217ENST00000540166 GLIPR2Q9H4G4 154 aa7.87□□□□□ -1.15
DDB1-217ENST00000540166 MTFP1Q9UDX5 166 aa7.87□□□□□ -1.15
DDB1-217ENST00000540166 ZNF587BE7ETH6 402 aa7.86□□□□□ -1.15
DDB1-217ENST00000540166 ATXN7O15265 892 aaPredicted RBP7.86□□□□□ -1.15
DDB1-217ENST00000540166 SRPX2O60687 465 aaPredicted RBP7.86□□□□□ -1.15
DDB1-217ENST00000540166 ARG1P05089 322 aa7.86□□□□□ -1.15
DDB1-217ENST00000540166 OR2T7P0C7T2 308 aa7.86□□□□□ -1.15
DDB1-217ENST00000540166 F3P13726 295 aa7.86□□□□□ -1.15
DDB1-217ENST00000540166 SELLP14151 372 aa7.86□□□□□ -1.15
DDB1-217ENST00000540166 RAP1AP62834 184 aa7.86□□□□□ -1.15
DDB1-217ENST00000540166 EBPQ15125 230 aaKnown RBP7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms