RNA–Protein interactions for RNA: ENST00000540159.3

BNIP3-202, Transcript of BCL2 interacting protein 3, humanhuman

TSL 1 (best)

Gene BNIP3, Length 3,066 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BNIP3-202ENST00000540159 RNF4P78317 190 aa12.22□□□□□ -0.45
BNIP3-202ENST00000540159 EMC4Q5J8M3 183 aa12.22□□□□□ -0.45
BNIP3-202ENST00000540159 GLT8D1Q68CQ7 371 aa12.22□□□□□ -0.45
BNIP3-202ENST00000540159 SEZ6L2Q6UXD5 910 aa12.22□□□□□ -0.45
BNIP3-202ENST00000540159 SYT13Q7L8C5 426 aa12.22□□□□□ -0.45
BNIP3-202ENST00000540159 BPIFB2Q8N4F0 458 aa12.22□□□□□ -0.45
BNIP3-202ENST00000540159 CLEC1AQ8NC01 280 aa12.22□□□□□ -0.45
BNIP3-202ENST00000540159 ZNF775Q96BV0 537 aaPredicted RBP12.22□□□□□ -0.45
BNIP3-202ENST00000540159 SLC41A2Q96JW4 573 aa12.22□□□□□ -0.45
BNIP3-202ENST00000540159 ZNF285Q96NJ3 590 aa12.22□□□□□ -0.45
BNIP3-202ENST00000540159 SLC6A7Q99884 636 aa12.22□□□□□ -0.45
BNIP3-202ENST00000540159 MFFQ9GZY8 342 aa12.22□□□□□ -0.45
BNIP3-202ENST00000540159 KLK13Q9UKR3 277 aa12.22□□□□□ -0.45
BNIP3-202ENST00000540159 RP2O75695 350 aa12.21□□□□□ -0.45
BNIP3-202ENST00000540159 PI3P19957 117 aa12.21□□□□□ -0.45
BNIP3-202ENST00000540159 PMPCAQ10713 525 aa12.21□□□□□ -0.45
BNIP3-202ENST00000540159 TUSC1Q2TAM9 212 aa12.21□□□□□ -0.45
BNIP3-202ENST00000540159 COX15Q7KZN9 410 aa12.21□□□□□ -0.45
BNIP3-202ENST00000540159 STPG2Q8N412 459 aa12.21□□□□□ -0.45
BNIP3-202ENST00000540159 LIPHQ8WWY8 451 aa12.21□□□□□ -0.45
BNIP3-202ENST00000540159 PELOQ9BRX2 385 aaKnown RBP12.21□□□□□ -0.45
BNIP3-202ENST00000540159 CNTD2Q9H8S5 307 aa12.21□□□□□ -0.45
BNIP3-202ENST00000540159 SLC22A11Q9NSA0 550 aa12.21□□□□□ -0.45
BNIP3-202ENST00000540159 EPHA6Q9UF33 1036 aa12.21□□□□□ -0.45
BNIP3-202ENST00000540159 KCNN3Q9UGI6 736 aa12.21□□□□□ -0.45
BNIP3-202ENST00000540159 SLC5A6Q9Y289 635 aa12.21□□□□□ -0.45
BNIP3-202ENST00000540159 NCOA6Q14686 2063 aaPredicted RBP12.21□□□□□ -0.46
BNIP3-202ENST00000540159 A0A1W2PPC1 479 aa12.21□□□□□ -0.46
BNIP3-202ENST00000540159 MS4A18H0YCH9 400 aa12.21□□□□□ -0.46
BNIP3-202ENST00000540159 HLA-AP01891 365 aaKnown RBP12.21□□□□□ -0.46
BNIP3-202ENST00000540159 OR4E1P0C645 316 aa12.21□□□□□ -0.46
BNIP3-202ENST00000540159 ABOP16442 354 aa12.21□□□□□ -0.46
BNIP3-202ENST00000540159 AKR1C4P17516 323 aa12.21□□□□□ -0.46
BNIP3-202ENST00000540159 AVPR2P30518 371 aa12.21□□□□□ -0.46
BNIP3-202ENST00000540159 MS4A18Q3C1V0 323 aa12.21□□□□□ -0.46
BNIP3-202ENST00000540159 GRINAQ7Z429 371 aa12.21□□□□□ -0.46
BNIP3-202ENST00000540159 SLC25A45Q8N413 288 aa12.21□□□□□ -0.46
BNIP3-202ENST00000540159 NAXEQ8NCW5 288 aa12.21□□□□□ -0.46
BNIP3-202ENST00000540159 OR2I1PQ8NGU4 316 aa12.21□□□□□ -0.46
BNIP3-202ENST00000540159 ANGPTL6Q8NI99 470 aa12.21□□□□□ -0.46
BNIP3-202ENST00000540159 DHRS9Q9BPW9 319 aa12.21□□□□□ -0.46
BNIP3-202ENST00000540159 EVA1AQ9H8M9 152 aa12.21□□□□□ -0.46
BNIP3-202ENST00000540159 SLC2A4RGQ9NR83 387 aa12.21□□□□□ -0.46
BNIP3-202ENST00000540159 HHLA2Q9UM44 414 aa12.21□□□□□ -0.46
BNIP3-202ENST00000540159 LOC400499M0QZD8 3231 aa12.21□□□□□ -0.46
BNIP3-202ENST00000540159 ZNF736B4DX44 427 aaPredicted RBP12.2□□□□□ -0.46
BNIP3-202ENST00000540159 RAMP1O60894 148 aa12.2□□□□□ -0.46
BNIP3-202ENST00000540159 SLC26A5P58743 744 aa12.2□□□□□ -0.46
BNIP3-202ENST00000540159 CXADRP78310 365 aa12.2□□□□□ -0.46
BNIP3-202ENST00000540159 ELP2Q6IA86 826 aa12.2□□□□□ -0.46
BNIP3-202ENST00000540159 STEAP2Q8NFT2 490 aa12.2□□□□□ -0.46
BNIP3-202ENST00000540159 ADAT3Q96EY9 351 aaPredicted RBP12.2□□□□□ -0.46
BNIP3-202ENST00000540159 FAM71F1Q96KD3 344 aaPredicted RBP12.2□□□□□ -0.46
BNIP3-202ENST00000540159 NICN1Q9BSH3 213 aa12.2□□□□□ -0.46
BNIP3-202ENST00000540159 BANF2Q9H503 90 aa12.2□□□□□ -0.46
BNIP3-202ENST00000540159 TNRC18O15417 2968 aaPredicted RBP12.2□□□□□ -0.46
BNIP3-202ENST00000540159 TRBV11-1A0A0K0K1C0 115 aa12.2□□□□□ -0.46
BNIP3-202ENST00000540159 H3BMH7 237 aa12.2□□□□□ -0.46
BNIP3-202ENST00000540159 PIAS2O75928 621 aa12.2□□□□□ -0.46
BNIP3-202ENST00000540159 NMBP08949 121 aa12.2□□□□□ -0.46
BNIP3-202ENST00000540159 MRPS10P82664 201 aaKnown RBP12.2□□□□□ -0.46
BNIP3-202ENST00000540159 GSG1LQ6UXU4 331 aa12.2□□□□□ -0.46
BNIP3-202ENST00000540159 NUP54Q7Z3B4 507 aa12.2□□□□□ -0.46
BNIP3-202ENST00000540159 CATSPERDQ86XM0 798 aa12.2□□□□□ -0.46
BNIP3-202ENST00000540159 ZNF101Q8IZC7 436 aa12.2□□□□□ -0.46
BNIP3-202ENST00000540159 OR6N1Q8NGY5 312 aa12.2□□□□□ -0.46
BNIP3-202ENST00000540159 MAFIPQ8WZ33 124 aa12.2□□□□□ -0.46
BNIP3-202ENST00000540159 CMTM3Q96MX0 182 aa12.2□□□□□ -0.46
BNIP3-202ENST00000540159 ZNF75AQ96N20 296 aa12.2□□□□□ -0.46
BNIP3-202ENST00000540159 SELENOIQ9C0D9 397 aa12.2□□□□□ -0.46
BNIP3-202ENST00000540159 PRMT8Q9NR22 394 aaPredicted RBP12.2□□□□□ -0.46
BNIP3-202ENST00000540159 MMACHCQ9Y4U1 282 aa12.2□□□□□ -0.46
BNIP3-202ENST00000540159 KNTC1P50748 2209 aa12.2□□□□□ -0.46
BNIP3-202ENST00000540159 NUP210LQ5VU65 1888 aa12.2□□□□□ -0.46
BNIP3-202ENST00000540159 A0A1B0GX78 115 aa12.19□□□□□ -0.46
BNIP3-202ENST00000540159 EEF1E1-BLOC1S5C9J1V9 151 aa12.19□□□□□ -0.46
BNIP3-202ENST00000540159 DUX1O43812 170 aa12.19□□□□□ -0.46
BNIP3-202ENST00000540159 FADS1O60427 444 aa12.19□□□□□ -0.46
BNIP3-202ENST00000540159 AKR1C2P52895 323 aa12.19□□□□□ -0.46
BNIP3-202ENST00000540159 AKR1C1Q04828 323 aa12.19□□□□□ -0.46
BNIP3-202ENST00000540159 NHLRC3Q5JS37 347 aa12.19□□□□□ -0.46
BNIP3-202ENST00000540159 BEST3Q8N1M1 668 aa12.19□□□□□ -0.46
BNIP3-202ENST00000540159 SPICQ8N5J4 248 aa12.19□□□□□ -0.46
BNIP3-202ENST00000540159 OR51E1Q8TCB6 317 aa12.19□□□□□ -0.46
BNIP3-202ENST00000540159 OR6C1Q96RD1 312 aa12.19□□□□□ -0.46
BNIP3-202ENST00000540159 PTTG3PQ9NZH4 202 aa12.19□□□□□ -0.46
BNIP3-202ENST00000540159 GPR179Q6PRD1 2367 aa12.19□□□□□ -0.46
BNIP3-202ENST00000540159 WIPF3A6NGB9 483 aa12.19□□□□□ -0.46
BNIP3-202ENST00000540159 DXOO77932 396 aaKnown RBP12.19□□□□□ -0.46
BNIP3-202ENST00000540159 ZNF432O94892 652 aa12.19□□□□□ -0.46
BNIP3-202ENST00000540159 DCNP07585 359 aaKnown RBP12.19□□□□□ -0.46
BNIP3-202ENST00000540159 CPN1P15169 458 aa12.19□□□□□ -0.46
BNIP3-202ENST00000540159 ZBTB44Q8NCP5 570 aa12.19□□□□□ -0.46
BNIP3-202ENST00000540159 OR10H5Q8NGA6 315 aa12.19□□□□□ -0.46
BNIP3-202ENST00000540159 C11orf40Q8WZ69 217 aa12.19□□□□□ -0.46
BNIP3-202ENST00000540159 ST8SIA4Q92187 359 aa12.19□□□□□ -0.46
BNIP3-202ENST00000540159 SLC25A28Q96A46 364 aa12.19□□□□□ -0.46
BNIP3-202ENST00000540159 NARS2Q96I59 477 aaKnown RBP12.19□□□□□ -0.46
BNIP3-202ENST00000540159 C13orf42A0A1B0GVH6 325 aa12.19□□□□□ -0.46
BNIP3-202ENST00000540159 hCG_1807616A0A1W2PRN6 198 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms