RNA–Protein interactions for RNA: ENST00000540017.6

SNRPA1-203, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 506 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-203ENST00000540017 PROKR2Q8NFJ6 384 aa15.67■□□□□ 0.1
SNRPA1-203ENST00000540017 OR1F12Q8NHA8 337 aa15.67■□□□□ 0.1
SNRPA1-203ENST00000540017 ABHD4Q8TB40 342 aa15.67■□□□□ 0.1
SNRPA1-203ENST00000540017 SLC25A40Q8TBP6 338 aa15.67■□□□□ 0.1
SNRPA1-203ENST00000540017 C10orf105Q8TEF2 133 aa15.67■□□□□ 0.1
SNRPA1-203ENST00000540017 GTF3AQ92664 365 aaKnown RBP15.67■□□□□ 0.1
SNRPA1-203ENST00000540017 NRBF2Q96F24 287 aa15.67■□□□□ 0.1
SNRPA1-203ENST00000540017 RHNO1Q9BSD3 238 aa15.67■□□□□ 0.1
SNRPA1-203ENST00000540017 HCAR1Q9BXC0 346 aa15.67■□□□□ 0.1
SNRPA1-203ENST00000540017 OR2J1Q9GZK6 312 aa15.67■□□□□ 0.1
SNRPA1-203ENST00000540017 RAB1BQ9H0U4 201 aa15.67■□□□□ 0.1
SNRPA1-203ENST00000540017 POFUT1Q9H488 388 aa15.67■□□□□ 0.1
SNRPA1-203ENST00000540017 MED20Q9H944 212 aa15.67■□□□□ 0.1
SNRPA1-203ENST00000540017 CMC2Q9NRP2 79 aa15.67■□□□□ 0.1
SNRPA1-203ENST00000540017 TAAR3PQ9P1P4 343 aa15.67■□□□□ 0.1
SNRPA1-203ENST00000540017 FBXO9Q9UK97 447 aaPredicted RBP15.67■□□□□ 0.1
SNRPA1-203ENST00000540017 MTORP42345 2549 aa15.67■□□□□ 0.1
SNRPA1-203ENST00000540017 CR1P17927 2039 aa15.67■□□□□ 0.1
SNRPA1-203ENST00000540017 A0A1W2PPW3 197 aa15.66■□□□□ 0.1
SNRPA1-203ENST00000540017 HLA-DQA2P01906 255 aa15.66■□□□□ 0.1
SNRPA1-203ENST00000540017 NAT2P11245 290 aa15.66■□□□□ 0.1
SNRPA1-203ENST00000540017 OSMP13725 252 aa15.66■□□□□ 0.1
SNRPA1-203ENST00000540017 GRK5P34947 590 aa15.66■□□□□ 0.1
SNRPA1-203ENST00000540017 RPS27P42677 84 aaKnown RBP15.66■□□□□ 0.1
SNRPA1-203ENST00000540017 DAPP51397 102 aa15.66■□□□□ 0.1
SNRPA1-203ENST00000540017 DSCR9P59020 149 aa15.66■□□□□ 0.1
SNRPA1-203ENST00000540017 PPP1CBP62140 327 aa15.66■□□□□ 0.1
SNRPA1-203ENST00000540017 GINS1Q14691 196 aa15.66■□□□□ 0.1
SNRPA1-203ENST00000540017 RSPO1Q2MKA7 263 aaPredicted RBP15.66■□□□□ 0.1
SNRPA1-203ENST00000540017 SLC18B1Q6NT16 456 aa15.66■□□□□ 0.1
SNRPA1-203ENST00000540017 FAHD1Q6P587 224 aa15.66■□□□□ 0.1
SNRPA1-203ENST00000540017 AMIGO2Q86SJ2 522 aa15.66■□□□□ 0.1
SNRPA1-203ENST00000540017 ATG16L2Q8NAA4 619 aa15.66■□□□□ 0.1
SNRPA1-203ENST00000540017 GJC3Q8NFK1 279 aa15.66■□□□□ 0.1
SNRPA1-203ENST00000540017 OR2T4Q8NH00 348 aa15.66■□□□□ 0.1
SNRPA1-203ENST00000540017 OR5K1Q8NHB7 308 aa15.66■□□□□ 0.1
SNRPA1-203ENST00000540017 LRTOMTQ8WZ04 291 aa15.66■□□□□ 0.1
SNRPA1-203ENST00000540017 FAM168AQ92567 244 aa15.66■□□□□ 0.1
SNRPA1-203ENST00000540017 ZNF556Q9HAH1 456 aa15.66■□□□□ 0.1
SNRPA1-203ENST00000540017 CYB5R1Q9UHQ9 305 aa15.66■□□□□ 0.1
SNRPA1-203ENST00000540017 GRIP1Q9Y3R0 1128 aa15.66■□□□□ 0.1
SNRPA1-203ENST00000540017 CHD3Q12873 2000 aaKnown RBP15.66■□□□□ 0.1
SNRPA1-203ENST00000540017 FAM183AA6NL82 134 aa15.65■□□□□ 0.1
SNRPA1-203ENST00000540017 RIIAD1A6NNX1 92 aa15.65■□□□□ 0.1
SNRPA1-203ENST00000540017 CIB2O75838 187 aa15.65■□□□□ 0.1
SNRPA1-203ENST00000540017 ABHD16AO95870 558 aa15.65■□□□□ 0.1
SNRPA1-203ENST00000540017 IGHV3-13P01766 116 aa15.65■□□□□ 0.1
SNRPA1-203ENST00000540017 SPI1P17947 270 aa15.65■□□□□ 0.1
SNRPA1-203ENST00000540017 SLC25A1P53007 311 aa15.65■□□□□ 0.1
SNRPA1-203ENST00000540017 CDK5Q00535 292 aa15.65■□□□□ 0.1
SNRPA1-203ENST00000540017 KRTAP1-1Q07627 177 aa15.65■□□□□ 0.1
SNRPA1-203ENST00000540017 ELFN2Q5R3F8 820 aa15.65■□□□□ 0.1
SNRPA1-203ENST00000540017 TMEM236Q5W0B7 351 aa15.65■□□□□ 0.1
SNRPA1-203ENST00000540017 CLEC9AQ6UXN8 241 aa15.65■□□□□ 0.1
SNRPA1-203ENST00000540017 KLF14Q8TD94 323 aaPredicted RBP15.65■□□□□ 0.1
SNRPA1-203ENST00000540017 IPCEF1Q8WWN9 437 aaPredicted RBP15.65■□□□□ 0.1
SNRPA1-203ENST00000540017 NEU4Q8WWR8 484 aaPredicted RBP15.65■□□□□ 0.1
SNRPA1-203ENST00000540017 PTP4A1Q93096 173 aa15.65■□□□□ 0.1
SNRPA1-203ENST00000540017 MS4A5Q9H3V2 200 aa15.65■□□□□ 0.1
SNRPA1-203ENST00000540017 WDR76Q9H967 626 aa15.65■□□□□ 0.1
SNRPA1-203ENST00000540017 LYNX1G3V0Z9 82 aa15.64■□□□□ 0.09
SNRPA1-203ENST00000540017 EBAG9O00559 213 aa15.64■□□□□ 0.09
SNRPA1-203ENST00000540017 IFNGP01579 166 aa15.64■□□□□ 0.09
SNRPA1-203ENST00000540017 LYNX1P0DP58 116 aa15.64■□□□□ 0.09
SNRPA1-203ENST00000540017 DAOP14920 347 aa15.64■□□□□ 0.09
SNRPA1-203ENST00000540017 FASP25445 335 aa15.64■□□□□ 0.09
SNRPA1-203ENST00000540017 PDLIM4P50479 330 aa15.64■□□□□ 0.09
SNRPA1-203ENST00000540017 ARHGDIAP52565 204 aa15.64■□□□□ 0.09
SNRPA1-203ENST00000540017 NKPD1Q17RQ9 610 aa15.64■□□□□ 0.09
SNRPA1-203ENST00000540017 ZNF718Q3SXZ3 478 aa15.64■□□□□ 0.09
SNRPA1-203ENST00000540017 LINC01590Q5TEZ4 76 aa15.64■□□□□ 0.09
SNRPA1-203ENST00000540017 MBNL2Q5VZF2 373 aaKnown RBP15.64■□□□□ 0.09
SNRPA1-203ENST00000540017 SLC27A4Q6P1M0 643 aa15.64■□□□□ 0.09
SNRPA1-203ENST00000540017 TMEM154Q6P9G4 183 aa15.64■□□□□ 0.09
SNRPA1-203ENST00000540017 ZNF511Q8NB15 262 aa15.64■□□□□ 0.09
SNRPA1-203ENST00000540017 OR10S1Q8NGN2 331 aa15.64■□□□□ 0.09
SNRPA1-203ENST00000540017 MAP6Q96JE9 813 aa15.64■□□□□ 0.09
SNRPA1-203ENST00000540017 CDADC1Q9BWV3 514 aa15.64■□□□□ 0.09
SNRPA1-203ENST00000540017 ELOVL3Q9HB03 270 aa15.64■□□□□ 0.09
SNRPA1-203ENST00000540017 PNRC2Q9NPJ4 139 aaKnown RBP15.64■□□□□ 0.09
SNRPA1-203ENST00000540017 TBCCD1Q9NVR7 557 aa15.64■□□□□ 0.09
SNRPA1-203ENST00000540017 ATPIF1Q9UII2 106 aa15.64■□□□□ 0.09
SNRPA1-203ENST00000540017 STARD10Q9Y365 291 aa15.64■□□□□ 0.09
SNRPA1-203ENST00000540017 COMMD3-BMI1R4GMX3 469 aa15.64■□□□□ 0.09
SNRPA1-203ENST00000540017 VWC2LB2RUY7 222 aa15.63■□□□□ 0.09
SNRPA1-203ENST00000540017 MITFO75030 526 aaPredicted RBP15.63■□□□□ 0.09
SNRPA1-203ENST00000540017 NCR1O76036 304 aa15.63■□□□□ 0.09
SNRPA1-203ENST00000540017 HPXP02790 462 aa15.63■□□□□ 0.09
SNRPA1-203ENST00000540017 CSF3P09919 207 aa15.63■□□□□ 0.09
SNRPA1-203ENST00000540017 ZNF3P17036 446 aa15.63■□□□□ 0.09
SNRPA1-203ENST00000540017 SELENOVP59797 346 aa15.63■□□□□ 0.09
SNRPA1-203ENST00000540017 KPNB1Q14974 876 aaKnown RBP15.63■□□□□ 0.09
SNRPA1-203ENST00000540017 CARTPTQ16568 116 aa15.63■□□□□ 0.09
SNRPA1-203ENST00000540017 KRTAP27-1Q3LI81 207 aa15.63■□□□□ 0.09
SNRPA1-203ENST00000540017 COQ7Q99807 217 aa15.63■□□□□ 0.09
SNRPA1-203ENST00000540017 HDHD2Q9H0R4 259 aa15.63■□□□□ 0.09
SNRPA1-203ENST00000540017 HINT3Q9NQE9 182 aaKnown RBP15.63■□□□□ 0.09
SNRPA1-203ENST00000540017 PAPOLBQ9NRJ5 636 aaKnown RBP15.63■□□□□ 0.09
SNRPA1-203ENST00000540017 SLCO1C1Q9NYB5 712 aa15.63■□□□□ 0.09
SNRPA1-203ENST00000540017 G3V2T6 193 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms