RNA–Protein interactions for RNA: ENST00000539982.5

CLSTN3-209, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-209ENST00000539982 PTOV1Q86YD1 416 aa9.68□□□□□ -0.86
CLSTN3-209ENST00000539982 ATG16L2Q8NAA4 619 aa9.68□□□□□ -0.86
CLSTN3-209ENST00000539982 OR8B3Q8NGG8 313 aa9.68□□□□□ -0.86
CLSTN3-209ENST00000539982 ZNF420Q8TAQ5 688 aaPredicted RBP9.68□□□□□ -0.86
CLSTN3-209ENST00000539982 BCAS4Q8TDM0 211 aa9.68□□□□□ -0.86
CLSTN3-209ENST00000539982 ADAMTS16Q8TE57 1224 aa9.68□□□□□ -0.86
CLSTN3-209ENST00000539982 C10orf82Q8WW14 230 aa9.68□□□□□ -0.86
CLSTN3-209ENST00000539982 HDAC2Q92769 488 aaKnown RBP9.68□□□□□ -0.86
CLSTN3-209ENST00000539982 PTP4A1Q93096 173 aa9.68□□□□□ -0.86
CLSTN3-209ENST00000539982 C7orf26Q96N11 449 aa9.68□□□□□ -0.86
CLSTN3-209ENST00000539982 OR8B2Q96RD0 313 aa9.68□□□□□ -0.86
CLSTN3-209ENST00000539982 POFUT1Q9H488 388 aa9.68□□□□□ -0.86
CLSTN3-209ENST00000539982 MEPEQ9NQ76 525 aaPredicted RBP9.68□□□□□ -0.86
CLSTN3-209ENST00000539982 ZKSCAN7Q9P0L1 754 aaPredicted RBP9.68□□□□□ -0.86
CLSTN3-209ENST00000539982 SLAMF8Q9P0V8 285 aa9.68□□□□□ -0.86
CLSTN3-209ENST00000539982 CLN8Q9UBY8 286 aa9.68□□□□□ -0.86
CLSTN3-209ENST00000539982 NDRG4Q9ULP0 352 aaKnown RBP9.68□□□□□ -0.86
CLSTN3-209ENST00000539982 KMT2CQ8NEZ4 4911 aaKnown RBP9.68□□□□□ -0.86
CLSTN3-209ENST00000539982 G3V4G9 280 aa9.67□□□□□ -0.86
CLSTN3-209ENST00000539982 P2RY10O00398 339 aa9.67□□□□□ -0.86
CLSTN3-209ENST00000539982 NDUFAB1O14561 156 aa9.67□□□□□ -0.86
CLSTN3-209ENST00000539982 CYB5R3P00387 301 aaPredicted RBP9.67□□□□□ -0.86
CLSTN3-209ENST00000539982 CSF1P09603 554 aa9.67□□□□□ -0.86
CLSTN3-209ENST00000539982 COX5BP10606 129 aa9.67□□□□□ -0.86
CLSTN3-209ENST00000539982 NR2C1P13056 603 aa9.67□□□□□ -0.86
CLSTN3-209ENST00000539982 AQP2P41181 271 aa9.67□□□□□ -0.86
CLSTN3-209ENST00000539982 GUCA1AP43080 201 aaPredicted RBP9.67□□□□□ -0.86
CLSTN3-209ENST00000539982 PITPNBP48739 271 aa9.67□□□□□ -0.86
CLSTN3-209ENST00000539982 CD47Q08722 323 aa9.67□□□□□ -0.86
CLSTN3-209ENST00000539982 RUNDC3AQ59EK9 446 aa9.67□□□□□ -0.86
CLSTN3-209ENST00000539982 REC114Q7Z4M0 266 aa9.67□□□□□ -0.86
CLSTN3-209ENST00000539982 SYT9Q86SS6 491 aa9.67□□□□□ -0.86
CLSTN3-209ENST00000539982 RBM45Q8IUH3 476 aaKnown RBP9.67□□□□□ -0.86
CLSTN3-209ENST00000539982 ZSCAN4Q8NAM6 433 aaPredicted RBP9.67□□□□□ -0.86
CLSTN3-209ENST00000539982 COG8Q96MW5 612 aa9.67□□□□□ -0.86
CLSTN3-209ENST00000539982 RBP7Q96R05 134 aa9.67□□□□□ -0.86
CLSTN3-209ENST00000539982 PCGF1Q9BSM1 259 aa9.67□□□□□ -0.86
CLSTN3-209ENST00000539982 C16orf95Q9H693 158 aa9.67□□□□□ -0.86
CLSTN3-209ENST00000539982 VAPAQ9P0L0 249 aa9.67□□□□□ -0.86
CLSTN3-209ENST00000539982 KIF17Q9P2E2 1029 aa9.67□□□□□ -0.86
CLSTN3-209ENST00000539982 CORO2BQ9UQ03 480 aa9.67□□□□□ -0.86
CLSTN3-209ENST00000539982 ANGPT4Q9Y264 503 aa9.67□□□□□ -0.86
CLSTN3-209ENST00000539982 STARD10Q9Y365 291 aa9.67□□□□□ -0.86
CLSTN3-209ENST00000539982 CENPVL3A0A0U1RRI6 287 aa9.66□□□□□ -0.86
CLSTN3-209ENST00000539982 NPIPB13A6NJU9 1138 aa9.66□□□□□ -0.86
CLSTN3-209ENST00000539982 LRRC30A6NM36 301 aa9.66□□□□□ -0.86
CLSTN3-209ENST00000539982 C12orf71A8MTZ7 269 aa9.66□□□□□ -0.86
CLSTN3-209ENST00000539982 EVPLLA8MZ36 301 aa9.66□□□□□ -0.86
CLSTN3-209ENST00000539982 NPIPB4C9JG80 1138 aa9.66□□□□□ -0.86
CLSTN3-209ENST00000539982 M0QX08 132 aa9.66□□□□□ -0.86
CLSTN3-209ENST00000539982 PHYHO14832 338 aa9.66□□□□□ -0.86
CLSTN3-209ENST00000539982 ENSAO43768 121 aaKnown RBP9.66□□□□□ -0.86
CLSTN3-209ENST00000539982 OR7A10O76100 309 aa9.66□□□□□ -0.86
CLSTN3-209ENST00000539982 MT-ND1P03886 318 aa9.66□□□□□ -0.86
CLSTN3-209ENST00000539982 TSPAN19P0C672 248 aa9.66□□□□□ -0.86
CLSTN3-209ENST00000539982 TROVE2P10155 538 aaKnown RBP eCLIP9.66□□□□□ -0.86
CLSTN3-209ENST00000539982 IER3P46695 156 aa9.66□□□□□ -0.86
CLSTN3-209ENST00000539982 PCBP3P57721 371 aaKnown RBP9.66□□□□□ -0.86
CLSTN3-209ENST00000539982 ZNF181Q2M3W8 571 aa9.66□□□□□ -0.86
CLSTN3-209ENST00000539982 WDR25Q64LD2 544 aaPredicted RBP9.66□□□□□ -0.86
CLSTN3-209ENST00000539982 ZNF841Q6ZN19 808 aa9.66□□□□□ -0.86
CLSTN3-209ENST00000539982 Q6ZSV7 163 aa9.66□□□□□ -0.86
CLSTN3-209ENST00000539982 FOXL2NBQ6ZUU3 175 aa9.66□□□□□ -0.86
CLSTN3-209ENST00000539982 PIGWQ7Z7B1 504 aa9.66□□□□□ -0.86
CLSTN3-209ENST00000539982 TSPYL5Q86VY4 417 aaPredicted RBP9.66□□□□□ -0.86
CLSTN3-209ENST00000539982 GPR32P1Q8NGA4 272 aa9.66□□□□□ -0.86
CLSTN3-209ENST00000539982 OR4D11Q8NGI4 311 aa9.66□□□□□ -0.86
CLSTN3-209ENST00000539982 MOSPD2Q8NHP6 518 aa9.66□□□□□ -0.86
CLSTN3-209ENST00000539982 FNDC8Q8TC99 324 aa9.66□□□□□ -0.86
CLSTN3-209ENST00000539982 GATAD2BQ8WXI9 593 aa9.66□□□□□ -0.86
CLSTN3-209ENST00000539982 MEGF10Q96KG7 1140 aa9.66□□□□□ -0.86
CLSTN3-209ENST00000539982 OR52B2Q96RD2 323 aa9.66□□□□□ -0.86
CLSTN3-209ENST00000539982 ELAC2Q9BQ52 826 aaKnown RBP9.66□□□□□ -0.86
CLSTN3-209ENST00000539982 PRSS27Q9BQR3 290 aa9.66□□□□□ -0.86
CLSTN3-209ENST00000539982 WACQ9BTA9 647 aa9.66□□□□□ -0.86
CLSTN3-209ENST00000539982 CDADC1Q9BWV3 514 aa9.66□□□□□ -0.86
CLSTN3-209ENST00000539982 TRIM15Q9C019 465 aa9.66□□□□□ -0.86
CLSTN3-209ENST00000539982 TXNIPQ9H3M7 391 aa9.66□□□□□ -0.86
CLSTN3-209ENST00000539982 IKZF5Q9H5V7 419 aa9.66□□□□□ -0.86
CLSTN3-209ENST00000539982 ACOXLQ9NUZ1 547 aa9.66□□□□□ -0.86
CLSTN3-209ENST00000539982 TRBV5-3A0A0A0MS03 114 aa9.65□□□□□ -0.86
CLSTN3-209ENST00000539982 ZNF879B4DU55 563 aa9.65□□□□□ -0.86
CLSTN3-209ENST00000539982 H0YL77 283 aa9.65□□□□□ -0.86
CLSTN3-209ENST00000539982 SNX3O60493 162 aa9.65□□□□□ -0.86
CLSTN3-209ENST00000539982 TOX4O94842 621 aa9.65□□□□□ -0.86
CLSTN3-209ENST00000539982 IGHV4-59P01825 116 aa9.65□□□□□ -0.86
CLSTN3-209ENST00000539982 PRB2P02812 416 aaPredicted RBP9.65□□□□□ -0.86
CLSTN3-209ENST00000539982 LIPFP07098 398 aa9.65□□□□□ -0.86
CLSTN3-209ENST00000539982 SFTPBP07988 381 aa9.65□□□□□ -0.86
CLSTN3-209ENST00000539982 RAC2P15153 192 aa9.65□□□□□ -0.86
CLSTN3-209ENST00000539982 MSR1P21757 451 aa9.65□□□□□ -0.86
CLSTN3-209ENST00000539982 CFHR2P36980 270 aa9.65□□□□□ -0.86
CLSTN3-209ENST00000539982 SRP9P49458 86 aaKnown RBP9.65□□□□□ -0.86
CLSTN3-209ENST00000539982 ERFP50548 548 aa9.65□□□□□ -0.86
CLSTN3-209ENST00000539982 ENDOGQ14249 297 aaKnown RBP9.65□□□□□ -0.86
CLSTN3-209ENST00000539982 LAPTM4AQ15012 233 aa9.65□□□□□ -0.86
CLSTN3-209ENST00000539982 FAM189A2Q15884 450 aa9.65□□□□□ -0.86
CLSTN3-209ENST00000539982 SAMD5Q5TGI4 173 aa9.65□□□□□ -0.86
CLSTN3-209ENST00000539982 CGB2Q6NT52 195 aa9.65□□□□□ -0.86
CLSTN3-209ENST00000539982 LYPD2Q6UXB3 125 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms