RNA–Protein interactions for RNA: ENST00000539506.5

SFSWAP-208, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 3,149 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-208ENST00000539506 ABCD4O14678 606 aa11.28□□□□□ -0.6
SFSWAP-208ENST00000539506 NDUFA2O43678 99 aa11.28□□□□□ -0.6
SFSWAP-208ENST00000539506 LDOC1O95751 146 aaPredicted RBP11.28□□□□□ -0.6
SFSWAP-208ENST00000539506 BGLAPP02818 100 aa11.28□□□□□ -0.6
SFSWAP-208ENST00000539506 RBM39Q14498 530 aaKnown RBP11.28□□□□□ -0.6
SFSWAP-208ENST00000539506 GLYATL3Q5SZD4 288 aa11.28□□□□□ -0.6
SFSWAP-208ENST00000539506 EEF1A1P5Q5VTE0 462 aa11.28□□□□□ -0.6
SFSWAP-208ENST00000539506 FOXRED2Q8IWF2 684 aa11.28□□□□□ -0.6
SFSWAP-208ENST00000539506 PARP12Q9H0J9 701 aaKnown RBP11.28□□□□□ -0.6
SFSWAP-208ENST00000539506 TREM1Q9NP99 234 aa11.28□□□□□ -0.6
SFSWAP-208ENST00000539506 SHPKQ9UHJ6 478 aa11.28□□□□□ -0.6
SFSWAP-208ENST00000539506 ZNF175Q9Y473 711 aa11.28□□□□□ -0.6
SFSWAP-208ENST00000539506 TMEM150CB9EJG8 249 aa11.27□□□□□ -0.6
SFSWAP-208ENST00000539506 MPZL1O95297 269 aa11.27□□□□□ -0.6
SFSWAP-208ENST00000539506 PNPP00491 289 aa11.27□□□□□ -0.6
SFSWAP-208ENST00000539506 ADCYAP1P18509 176 aa11.27□□□□□ -0.6
SFSWAP-208ENST00000539506 PI3P19957 117 aa11.27□□□□□ -0.6
SFSWAP-208ENST00000539506 CNR1P21554 472 aa11.27□□□□□ -0.6
SFSWAP-208ENST00000539506 RORAP35398 523 aa11.27□□□□□ -0.6
SFSWAP-208ENST00000539506 PLEKHN1Q494U1 663 aaPredicted RBP11.27□□□□□ -0.6
SFSWAP-208ENST00000539506 WDR38Q5JTN6 314 aa11.27□□□□□ -0.6
SFSWAP-208ENST00000539506 SYT13Q7L8C5 426 aa11.27□□□□□ -0.6
SFSWAP-208ENST00000539506 KRT77Q7Z794 578 aa11.27□□□□□ -0.6
SFSWAP-208ENST00000539506 CHST4Q8NCG5 386 aa11.27□□□□□ -0.6
SFSWAP-208ENST00000539506 BHLHE23Q8NDY6 225 aa11.27□□□□□ -0.6
SFSWAP-208ENST00000539506 TMPRSS13Q9BYE2 586 aa11.27□□□□□ -0.6
SFSWAP-208ENST00000539506 PRELID3BQ9Y3B1 194 aa11.27□□□□□ -0.6
SFSWAP-208ENST00000539506 SPAG17Q6Q759 2223 aa11.27□□□□□ -0.61
SFSWAP-208ENST00000539506 ABCA7Q8IZY2 2146 aa11.27□□□□□ -0.61
SFSWAP-208ENST00000539506 METTL12A8MUP2 240 aa11.27□□□□□ -0.61
SFSWAP-208ENST00000539506 F8W036 122 aa11.27□□□□□ -0.61
SFSWAP-208ENST00000539506 CD34P28906 385 aa11.27□□□□□ -0.61
SFSWAP-208ENST00000539506 CD38P28907 300 aa11.27□□□□□ -0.61
SFSWAP-208ENST00000539506 NR0B1P51843 470 aaKnown RBP11.27□□□□□ -0.61
SFSWAP-208ENST00000539506 OR1D5P58170 312 aa11.27□□□□□ -0.61
SFSWAP-208ENST00000539506 BLOC1S1P78537 153 aa11.27□□□□□ -0.61
SFSWAP-208ENST00000539506 DHRS2Q13268 280 aa11.27□□□□□ -0.61
SFSWAP-208ENST00000539506 EBPQ15125 230 aaKnown RBP11.27□□□□□ -0.61
SFSWAP-208ENST00000539506 WDFY1Q8IWB7 410 aa11.27□□□□□ -0.61
SFSWAP-208ENST00000539506 OR10R2Q8NGX6 335 aa11.27□□□□□ -0.61
SFSWAP-208ENST00000539506 OR6K3Q8NGY3 331 aa11.27□□□□□ -0.61
SFSWAP-208ENST00000539506 OR1L3Q8NH93 324 aa11.27□□□□□ -0.61
SFSWAP-208ENST00000539506 SLC6A7Q99884 636 aa11.27□□□□□ -0.61
SFSWAP-208ENST00000539506 PELOQ9BRX2 385 aaKnown RBP11.27□□□□□ -0.61
SFSWAP-208ENST00000539506 LAT2Q9GZY6 243 aa11.27□□□□□ -0.61
SFSWAP-208ENST00000539506 TLNRD1Q9H1K6 362 aa11.27□□□□□ -0.61
SFSWAP-208ENST00000539506 SLC6A15Q9H2J7 730 aa11.27□□□□□ -0.61
SFSWAP-208ENST00000539506 UCK1Q9HA47 277 aa11.27□□□□□ -0.61
SFSWAP-208ENST00000539506 ELOVL3Q9HB03 270 aa11.27□□□□□ -0.61
SFSWAP-208ENST00000539506 EMC3Q9P0I2 261 aa11.27□□□□□ -0.61
SFSWAP-208ENST00000539506 TMED7Q9Y3B3 224 aa11.27□□□□□ -0.61
SFSWAP-208ENST00000539506 FREM3P0C091 2139 aa11.27□□□□□ -0.61
SFSWAP-208ENST00000539506 TRBV5-7A0A0A0MS05 114 aa11.26□□□□□ -0.61
SFSWAP-208ENST00000539506 RFPL4AA6NLU0 287 aa11.26□□□□□ -0.61
SFSWAP-208ENST00000539506 RFPL4AL1F8VTS6 287 aa11.26□□□□□ -0.61
SFSWAP-208ENST00000539506 TACSTD2P09758 323 aa11.26□□□□□ -0.61
SFSWAP-208ENST00000539506 PVALBP20472 110 aaPredicted RBP11.26□□□□□ -0.61
SFSWAP-208ENST00000539506 CDNFQ49AH0 187 aa11.26□□□□□ -0.61
SFSWAP-208ENST00000539506 JMJD6Q6NYC1 403 aaPredicted RBP11.26□□□□□ -0.61
SFSWAP-208ENST00000539506 BPIFB2Q8N4F0 458 aa11.26□□□□□ -0.61
SFSWAP-208ENST00000539506 OR6N1Q8NGY5 312 aa11.26□□□□□ -0.61
SFSWAP-208ENST00000539506 CCNL2Q96S94 520 aaPredicted RBP11.26□□□□□ -0.61
SFSWAP-208ENST00000539506 SELENOIQ9C0D9 397 aa11.26□□□□□ -0.61
SFSWAP-208ENST00000539506 RASL12Q9NYN1 266 aa11.26□□□□□ -0.61
SFSWAP-208ENST00000539506 COMMD9Q9P000 198 aa11.26□□□□□ -0.61
SFSWAP-208ENST00000539506 B9D1Q9UPM9 204 aa11.26□□□□□ -0.61
SFSWAP-208ENST00000539506 C5orf51A6NDU8 294 aa11.26□□□□□ -0.61
SFSWAP-208ENST00000539506 EIF1AYO14602 144 aaKnown RBP11.26□□□□□ -0.61
SFSWAP-208ENST00000539506 ADAM10O14672 748 aa11.26□□□□□ -0.61
SFSWAP-208ENST00000539506 TO15178 435 aa11.26□□□□□ -0.61
SFSWAP-208ENST00000539506 SPARCP09486 303 aa11.26□□□□□ -0.61
SFSWAP-208ENST00000539506 TGIF1Q15583 401 aa11.26□□□□□ -0.61
SFSWAP-208ENST00000539506 C16orf47Q6ZP98 133 aaPredicted RBP11.26□□□□□ -0.61
SFSWAP-208ENST00000539506 GKN2Q86XP6 184 aa11.26□□□□□ -0.61
SFSWAP-208ENST00000539506 TMED6Q8WW62 240 aa11.26□□□□□ -0.61
SFSWAP-208ENST00000539506 MRPL48Q96GC5 212 aaKnown RBP11.26□□□□□ -0.61
SFSWAP-208ENST00000539506 SPACA5Q96QH8 159 aa11.26□□□□□ -0.61
SFSWAP-208ENST00000539506 FER1L5A0AVI2 2057 aa11.26□□□□□ -0.61
SFSWAP-208ENST00000539506 NUP210LQ5VU65 1888 aa11.26□□□□□ -0.61
SFSWAP-208ENST00000539506 TUBAL3A6NHL2 446 aa11.26□□□□□ -0.61
SFSWAP-208ENST00000539506 TSPAN2O60636 221 aa11.26□□□□□ -0.61
SFSWAP-208ENST00000539506 ACTL6AO96019 429 aa11.26□□□□□ -0.61
SFSWAP-208ENST00000539506 RD3LP0DJH9 198 aa11.26□□□□□ -0.61
SFSWAP-208ENST00000539506 CALCBP10092 127 aa11.26□□□□□ -0.61
SFSWAP-208ENST00000539506 FOLR1P15328 257 aa11.26□□□□□ -0.61
SFSWAP-208ENST00000539506 NPBWR1P48145 328 aa11.26□□□□□ -0.61
SFSWAP-208ENST00000539506 CXADRP78310 365 aa11.26□□□□□ -0.61
SFSWAP-208ENST00000539506 ATPAF1Q5TC12 328 aaPredicted RBP11.26□□□□□ -0.61
SFSWAP-208ENST00000539506 NAXDQ8IW45 347 aa11.26□□□□□ -0.61
SFSWAP-208ENST00000539506 TSTD1Q8NFU3 115 aa11.26□□□□□ -0.61
SFSWAP-208ENST00000539506 COMMD4Q9H0A8 199 aa11.26□□□□□ -0.61
SFSWAP-208ENST00000539506 DNTTIP1Q9H147 329 aa11.26□□□□□ -0.61
SFSWAP-208ENST00000539506 HRH4Q9H3N8 390 aa11.26□□□□□ -0.61
SFSWAP-208ENST00000539506 MRPL22Q9NWU5 206 aaKnown RBP11.26□□□□□ -0.61
SFSWAP-208ENST00000539506 TAS2R4Q9NYW5 299 aa11.26□□□□□ -0.61
SFSWAP-208ENST00000539506 MBD2Q9UBB5 411 aa11.26□□□□□ -0.61
SFSWAP-208ENST00000539506 GLS2Q9UI32 602 aa11.26□□□□□ -0.61
SFSWAP-208ENST00000539506 A0A1B0GTQ1 180 aa11.25□□□□□ -0.61
SFSWAP-208ENST00000539506 SULT1B1O43704 296 aa11.25□□□□□ -0.61
SFSWAP-208ENST00000539506 CSF1P09603 554 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms