RNA–Protein interactions for RNA: ENST00000539417.6

RPAIN-206, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,471 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-206ENST00000539417 PLEK2Q9NYT0 353 aa13.55□□□□□ -0.24
RPAIN-206ENST00000539417 LY6HO94772 140 aa13.54□□□□□ -0.24
RPAIN-206ENST00000539417 CLPTM1O96005 669 aa13.54□□□□□ -0.24
RPAIN-206ENST00000539417 PTHP01270 115 aa13.54□□□□□ -0.24
RPAIN-206ENST00000539417 ANOS1P23352 680 aa13.54□□□□□ -0.24
RPAIN-206ENST00000539417 ATP5J2P56134 94 aa13.54□□□□□ -0.24
RPAIN-206ENST00000539417 ESRRGP62508 458 aa13.54□□□□□ -0.24
RPAIN-206ENST00000539417 EFNB3Q15768 340 aa13.54□□□□□ -0.24
RPAIN-206ENST00000539417 SPATA46Q5T0L3 261 aa13.54□□□□□ -0.24
RPAIN-206ENST00000539417 SLX4IPQ5VYV7 408 aa13.54□□□□□ -0.24
RPAIN-206ENST00000539417 C12orf73Q69YU5 71 aa13.54□□□□□ -0.24
RPAIN-206ENST00000539417 ALDH16A1Q8IZ83 802 aa13.54□□□□□ -0.24
RPAIN-206ENST00000539417 LRRC75A-AS1Q8N1F1 130 aa13.54□□□□□ -0.24
RPAIN-206ENST00000539417 PQLC1Q8N2U9 271 aa13.54□□□□□ -0.24
RPAIN-206ENST00000539417 CBR4Q8N4T8 237 aa13.54□□□□□ -0.24
RPAIN-206ENST00000539417 OR10H5Q8NGA6 315 aa13.54□□□□□ -0.24
RPAIN-206ENST00000539417 OR1F12Q8NHA8 337 aa13.54□□□□□ -0.24
RPAIN-206ENST00000539417 MRPL24Q96A35 216 aaKnown RBP13.54□□□□□ -0.24
RPAIN-206ENST00000539417 ZMYND19Q96E35 227 aaPredicted RBP13.54□□□□□ -0.24
RPAIN-206ENST00000539417 DOK1Q99704 481 aa13.54□□□□□ -0.24
RPAIN-206ENST00000539417 PLK3Q9H4B4 646 aa13.54□□□□□ -0.24
RPAIN-206ENST00000539417 RIBC2Q9H4K1 309 aa13.54□□□□□ -0.24
RPAIN-206ENST00000539417 ARID1AO14497 2285 aa13.54□□□□□ -0.24
RPAIN-206ENST00000539417 PRR23D1E9PI22 279 aaPredicted RBP13.53□□□□□ -0.24
RPAIN-206ENST00000539417 BAG2O95816 211 aa13.53□□□□□ -0.24
RPAIN-206ENST00000539417 HMGN1P05114 100 aa13.53□□□□□ -0.24
RPAIN-206ENST00000539417 ALPLP05186 524 aa13.53□□□□□ -0.24
RPAIN-206ENST00000539417 LCKP06239 509 aa13.53□□□□□ -0.24
RPAIN-206ENST00000539417 PRR23D2P0DMB1 279 aaPredicted RBP13.53□□□□□ -0.24
RPAIN-206ENST00000539417 SLC2A5P22732 501 aa13.53□□□□□ -0.24
RPAIN-206ENST00000539417 EFNB1P98172 346 aa13.53□□□□□ -0.24
RPAIN-206ENST00000539417 MAD2L1BPQ15013 274 aaPredicted RBP13.53□□□□□ -0.24
RPAIN-206ENST00000539417 RAB35Q15286 201 aa13.53□□□□□ -0.24
RPAIN-206ENST00000539417 SNAPC1Q16533 368 aa13.53□□□□□ -0.24
RPAIN-206ENST00000539417 Q5PR19 223 aa13.53□□□□□ -0.24
RPAIN-206ENST00000539417 NAA40Q86UY6 237 aa13.53□□□□□ -0.24
RPAIN-206ENST00000539417 OR1J2Q8NGS2 313 aa13.53□□□□□ -0.24
RPAIN-206ENST00000539417 OR1J1Q8NGS3 322 aa13.53□□□□□ -0.24
RPAIN-206ENST00000539417 WACQ9BTA9 647 aa13.53□□□□□ -0.24
RPAIN-206ENST00000539417 GABARAPL3Q9BY60 117 aa13.53□□□□□ -0.24
RPAIN-206ENST00000539417 CMAHPQ9Y471 501 aa13.53□□□□□ -0.24
RPAIN-206ENST00000539417 B9A039 149 aa13.52□□□□□ -0.25
RPAIN-206ENST00000539417 ZNF593O00488 134 aaPredicted RBP13.52□□□□□ -0.25
RPAIN-206ENST00000539417 GLCEO94923 617 aa13.52□□□□□ -0.25
RPAIN-206ENST00000539417 SPARCP09486 303 aa13.52□□□□□ -0.25
RPAIN-206ENST00000539417 COX5BP10606 129 aa13.52□□□□□ -0.25
RPAIN-206ENST00000539417 ZNF823P16415 610 aa13.52□□□□□ -0.25
RPAIN-206ENST00000539417 PCSK6P29122 969 aa13.52□□□□□ -0.25
RPAIN-206ENST00000539417 FMO3P31513 532 aa13.52□□□□□ -0.25
RPAIN-206ENST00000539417 MPV17P39210 176 aa13.52□□□□□ -0.25
RPAIN-206ENST00000539417 ALKBH6Q3KRA9 238 aa13.52□□□□□ -0.25
RPAIN-206ENST00000539417 ZIK1Q3SY52 487 aaPredicted RBP13.52□□□□□ -0.25
RPAIN-206ENST00000539417 ELFN2Q5R3F8 820 aa13.52□□□□□ -0.25
RPAIN-206ENST00000539417 SPNS3Q6ZMD2 512 aa13.52□□□□□ -0.25
RPAIN-206ENST00000539417 GJC3Q8NFK1 279 aa13.52□□□□□ -0.25
RPAIN-206ENST00000539417 ABHD4Q8TB40 342 aa13.52□□□□□ -0.25
RPAIN-206ENST00000539417 GTF3AQ92664 365 aaKnown RBP13.52□□□□□ -0.25
RPAIN-206ENST00000539417 C4orf45Q96LM5 186 aa13.52□□□□□ -0.25
RPAIN-206ENST00000539417 SORCS2Q96PQ0 1159 aa13.52□□□□□ -0.25
RPAIN-206ENST00000539417 AMELYQ99218 206 aa13.52□□□□□ -0.25
RPAIN-206ENST00000539417 RBM4BQ9BQ04 359 aaKnown RBP13.52□□□□□ -0.25
RPAIN-206ENST00000539417 CDADC1Q9BWV3 514 aa13.52□□□□□ -0.25
RPAIN-206ENST00000539417 DUSP13Q9UII6 198 aa13.52□□□□□ -0.25
RPAIN-206ENST00000539417 SPEF1Q9Y4P9 236 aa13.52□□□□□ -0.25
RPAIN-206ENST00000539417 CCDC182A6NF36 153 aa13.51□□□□□ -0.25
RPAIN-206ENST00000539417 SELENOFO60613 162 aa13.51□□□□□ -0.25
RPAIN-206ENST00000539417 GSTT1P30711 240 aa13.51□□□□□ -0.25
RPAIN-206ENST00000539417 ALDH3B1P43353 468 aa13.51□□□□□ -0.25
RPAIN-206ENST00000539417 ENTPD1P49961 510 aa13.51□□□□□ -0.25
RPAIN-206ENST00000539417 PCK2Q16822 640 aa13.51□□□□□ -0.25
RPAIN-206ENST00000539417 KRTAP27-1Q3LI81 207 aa13.51□□□□□ -0.25
RPAIN-206ENST00000539417 KLHL12Q53G59 568 aa13.51□□□□□ -0.25
RPAIN-206ENST00000539417 RGS7BPQ6MZT1 257 aaPredicted RBP13.51□□□□□ -0.25
RPAIN-206ENST00000539417 CXXC5Q7LFL8 322 aaKnown RBP13.51□□□□□ -0.25
RPAIN-206ENST00000539417 DCXRQ7Z4W1 244 aa13.51□□□□□ -0.25
RPAIN-206ENST00000539417 ERI1Q8IV48 349 aaKnown RBP13.51□□□□□ -0.25
RPAIN-206ENST00000539417 TIGD4Q8IY51 512 aa13.51□□□□□ -0.25
RPAIN-206ENST00000539417 TCEANCQ8N8B7 351 aa13.51□□□□□ -0.25
RPAIN-206ENST00000539417 SLC25A40Q8TBP6 338 aa13.51□□□□□ -0.25
RPAIN-206ENST00000539417 UBE2FQ969M7 185 aa13.51□□□□□ -0.25
RPAIN-206ENST00000539417 MARS2Q96GW9 593 aaKnown RBP13.51□□□□□ -0.25
RPAIN-206ENST00000539417 MBOAT4Q96T53 435 aa13.51□□□□□ -0.25
RPAIN-206ENST00000539417 OR2J1Q9GZK6 312 aa13.51□□□□□ -0.25
RPAIN-206ENST00000539417 MARCH7Q9H992 704 aa13.51□□□□□ -0.25
RPAIN-206ENST00000539417 USE1Q9NZ43 259 aa13.51□□□□□ -0.25
RPAIN-206ENST00000539417 KCNG2Q9UJ96 466 aa13.51□□□□□ -0.25
RPAIN-206ENST00000539417 NDRG4Q9ULP0 352 aaKnown RBP13.51□□□□□ -0.25
RPAIN-206ENST00000539417 STARD10Q9Y365 291 aa13.51□□□□□ -0.25
RPAIN-206ENST00000539417 GRIP1Q9Y3R0 1128 aa13.51□□□□□ -0.25
RPAIN-206ENST00000539417 C5orf63A6NC05 138 aa13.5□□□□□ -0.25
RPAIN-206ENST00000539417 E9PQ18 207 aa13.5□□□□□ -0.25
RPAIN-206ENST00000539417 H7C417 338 aa13.5□□□□□ -0.25
RPAIN-206ENST00000539417 TLX2O43763 284 aaPredicted RBP13.5□□□□□ -0.25
RPAIN-206ENST00000539417 ICMTO60725 284 aa13.5□□□□□ -0.25
RPAIN-206ENST00000539417 TMCC2O75069 709 aa13.5□□□□□ -0.25
RPAIN-206ENST00000539417 ABHD16AO95870 558 aa13.5□□□□□ -0.25
RPAIN-206ENST00000539417 ZNF250P15622 560 aa13.5□□□□□ -0.25
RPAIN-206ENST00000539417 RAD52P43351 418 aa13.5□□□□□ -0.25
RPAIN-206ENST00000539417 HCCSP53701 268 aa13.5□□□□□ -0.25
RPAIN-206ENST00000539417 SNRPD2P62316 118 aaKnown RBP13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms