RNA–Protein interactions for RNA: ENST00000538838.5

TMEM260-202, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best) BASIC

Gene TMEM260, Length 1,638 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-202ENST00000538838 NPAP1Q9NZP6 1156 aa20.45■□□□□ 0.87
TMEM260-202ENST00000538838 ERVK-18Q9QC07 812 aa20.45■□□□□ 0.87
TMEM260-202ENST00000538838 GCN1Q92616 2671 aaKnown RBP20.45■□□□□ 0.86
TMEM260-202ENST00000538838 PSMD9O00233 223 aa20.45■□□□□ 0.86
TMEM260-202ENST00000538838 CBR1P16152 277 aa20.45■□□□□ 0.86
TMEM260-202ENST00000538838 C21orf33P30042 268 aaPredicted RBP20.45■□□□□ 0.86
TMEM260-202ENST00000538838 ZNF83P51522 516 aa20.45■□□□□ 0.86
TMEM260-202ENST00000538838 IDH3GP51553 393 aaPredicted RBP20.45■□□□□ 0.86
TMEM260-202ENST00000538838 CHN2P52757 468 aa20.45■□□□□ 0.86
TMEM260-202ENST00000538838 ELFN2Q5R3F8 820 aa20.45■□□□□ 0.86
TMEM260-202ENST00000538838 LHFPL3Q86UP9 236 aa20.45■□□□□ 0.86
TMEM260-202ENST00000538838 CPEB3Q8NE35 698 aaKnown RBP20.45■□□□□ 0.86
TMEM260-202ENST00000538838 RNF133Q8WVZ7 376 aa20.45■□□□□ 0.86
TMEM260-202ENST00000538838 IPCEF1Q8WWN9 437 aaPredicted RBP20.45■□□□□ 0.86
TMEM260-202ENST00000538838 MYDGFQ969H8 173 aa20.45■□□□□ 0.86
TMEM260-202ENST00000538838 CENPMQ9NSP4 180 aa20.45■□□□□ 0.86
TMEM260-202ENST00000538838 NDRG3Q9UGV2 375 aa20.45■□□□□ 0.86
TMEM260-202ENST00000538838 UTP20O75691 2785 aaKnown RBP20.44■□□□□ 0.86
TMEM260-202ENST00000538838 ANKHD1Q8IWZ3 2542 aaKnown RBP20.44■□□□□ 0.86
TMEM260-202ENST00000538838 TUBAL3A6NHL2 446 aa20.44■□□□□ 0.86
TMEM260-202ENST00000538838 MAGEB4O15481 346 aaPredicted RBP20.44■□□□□ 0.86
TMEM260-202ENST00000538838 IGKV3-15P01624 115 aa20.44■□□□□ 0.86
TMEM260-202ENST00000538838 CDK1P06493 297 aa20.44■□□□□ 0.86
TMEM260-202ENST00000538838 ZNF14P17017 642 aaPredicted RBP20.44■□□□□ 0.86
TMEM260-202ENST00000538838 EEF1B2P24534 225 aaKnown RBP20.44■□□□□ 0.86
TMEM260-202ENST00000538838 DCKP27707 260 aa20.44■□□□□ 0.86
TMEM260-202ENST00000538838 ZNF322Q6U7Q0 402 aaPredicted RBP20.44■□□□□ 0.86
TMEM260-202ENST00000538838 LRRN1Q6UXK5 716 aa20.44■□□□□ 0.86
TMEM260-202ENST00000538838 JAM3Q9BX67 310 aa20.44■□□□□ 0.86
TMEM260-202ENST00000538838 YTHDF1Q9BYJ9 559 aaKnown RBP20.44■□□□□ 0.86
TMEM260-202ENST00000538838 HDHD2Q9H0R4 259 aa20.44■□□□□ 0.86
TMEM260-202ENST00000538838 ERVK13-1Q9NX77 482 aa20.44■□□□□ 0.86
TMEM260-202ENST00000538838 ZNF878C9JN71 531 aa20.43■□□□□ 0.86
TMEM260-202ENST00000538838 PHYHO14832 338 aa20.43■□□□□ 0.86
TMEM260-202ENST00000538838 SYNGR3O43761 229 aa20.43■□□□□ 0.86
TMEM260-202ENST00000538838 HTR1AP08908 422 aa20.43■□□□□ 0.86
TMEM260-202ENST00000538838 LIMS3P0CW19 117 aa20.43■□□□□ 0.86
TMEM260-202ENST00000538838 LIMS4P0CW20 117 aa20.43■□□□□ 0.86
TMEM260-202ENST00000538838 APEX1P27695 318 aaKnown RBP20.43■□□□□ 0.86
TMEM260-202ENST00000538838 HTR5AP47898 357 aa20.43■□□□□ 0.86
TMEM260-202ENST00000538838 ETV1P50549 477 aa20.43■□□□□ 0.86
TMEM260-202ENST00000538838 GABARAPL2P60520 117 aa20.43■□□□□ 0.86
TMEM260-202ENST00000538838 ASB17Q8WXJ9 295 aa20.43■□□□□ 0.86
TMEM260-202ENST00000538838 SLC7A6Q92536 515 aa20.43■□□□□ 0.86
TMEM260-202ENST00000538838 ATF6BQ99941 703 aa20.43■□□□□ 0.86
TMEM260-202ENST00000538838 ZNF649Q9BS31 505 aa20.43■□□□□ 0.86
TMEM260-202ENST00000538838 CRNNQ9UBG3 495 aaPredicted RBP20.43■□□□□ 0.86
TMEM260-202ENST00000538838 OR6C6A6NF89 314 aa20.42■□□□□ 0.86
TMEM260-202ENST00000538838 PLP2Q04941 152 aa20.42■□□□□ 0.86
TMEM260-202ENST00000538838 C1QTNF12Q5T7M4 302 aa20.42■□□□□ 0.86
TMEM260-202ENST00000538838 ALDH16A1Q8IZ83 802 aa20.42■□□□□ 0.86
TMEM260-202ENST00000538838 OR1F12Q8NHA8 337 aa20.42■□□□□ 0.86
TMEM260-202ENST00000538838 OR8B4Q96RC9 309 aa20.42■□□□□ 0.86
TMEM260-202ENST00000538838 SIGLEC11Q96RL6 698 aa20.42■□□□□ 0.86
TMEM260-202ENST00000538838 ALG8Q9BVK2 526 aa20.42■□□□□ 0.86
TMEM260-202ENST00000538838 INPP5EQ9NRR6 644 aa20.42■□□□□ 0.86
TMEM260-202ENST00000538838 DDX28Q9NUL7 540 aaKnown RBP20.42■□□□□ 0.86
TMEM260-202ENST00000538838 SLCO1C1Q9NYB5 712 aa20.42■□□□□ 0.86
TMEM260-202ENST00000538838 IKZF2Q9UKS7 526 aa20.42■□□□□ 0.86
TMEM260-202ENST00000538838 EXOSC1Q9Y3B2 195 aaKnown RBP20.42■□□□□ 0.86
TMEM260-202ENST00000538838 KLF2Q9Y5W3 355 aaPredicted RBP20.42■□□□□ 0.86
TMEM260-202ENST00000538838 IGHV1-18A0A0C4DH31 117 aa20.42■□□□□ 0.86
TMEM260-202ENST00000538838 IQCMA0A1B0GVH7 501 aa20.42■□□□□ 0.86
TMEM260-202ENST00000538838 M0R1B8 84 aa20.42■□□□□ 0.86
TMEM260-202ENST00000538838 RGS10O43665 173 aa20.42■□□□□ 0.86
TMEM260-202ENST00000538838 IGLV1-44P01699 117 aa20.42■□□□□ 0.86
TMEM260-202ENST00000538838 MT-ND2P03891 347 aa20.42■□□□□ 0.86
TMEM260-202ENST00000538838 SERPINA5P05154 406 aa20.42■□□□□ 0.86
TMEM260-202ENST00000538838 CECR9P0C854 216 aa20.42■□□□□ 0.86
TMEM260-202ENST00000538838 IGFBP2P18065 325 aa20.42■□□□□ 0.86
TMEM260-202ENST00000538838 MYL12AP19105 171 aa20.42■□□□□ 0.86
TMEM260-202ENST00000538838 OPRL1P41146 370 aa20.42■□□□□ 0.86
TMEM260-202ENST00000538838 CDH15P55291 814 aa20.42■□□□□ 0.86
TMEM260-202ENST00000538838 KRT77Q7Z794 578 aa20.42■□□□□ 0.86
TMEM260-202ENST00000538838 CCDC90BQ9GZT6 254 aa20.42■□□□□ 0.86
TMEM260-202ENST00000538838 CLEC2DQ9UHP7 191 aa20.42■□□□□ 0.86
TMEM260-202ENST00000538838 COL12A1Q99715 3063 aa20.41■□□□□ 0.86
TMEM260-202ENST00000538838 A1L4Q6 167 aa20.41■□□□□ 0.86
TMEM260-202ENST00000538838 PRSS44E7EML9 344 aa20.41■□□□□ 0.86
TMEM260-202ENST00000538838 TNFAIP8O95379 198 aa20.41■□□□□ 0.86
TMEM260-202ENST00000538838 CCL2P13500 99 aa20.41■□□□□ 0.86
TMEM260-202ENST00000538838 GALEQ14376 348 aa20.41■□□□□ 0.86
TMEM260-202ENST00000538838 KCTD21Q4G0X4 260 aa20.41■□□□□ 0.86
TMEM260-202ENST00000538838 TP53I3Q53FA7 332 aa20.41■□□□□ 0.86
TMEM260-202ENST00000538838 KCTD18Q6PI47 426 aaPredicted RBP20.41■□□□□ 0.86
TMEM260-202ENST00000538838 SNX33Q8WV41 574 aa20.41■□□□□ 0.86
TMEM260-202ENST00000538838 COQ7Q99807 217 aa20.41■□□□□ 0.86
TMEM260-202ENST00000538838 MOV10Q9HCE1 1003 aaKnown RBP20.41■□□□□ 0.86
TMEM260-202ENST00000538838 MRM2Q9UI43 246 aaKnown RBP20.41■□□□□ 0.86
TMEM260-202ENST00000538838 FBXL3Q9UKT7 428 aa20.41■□□□□ 0.86
TMEM260-202ENST00000538838 LRP12Q9Y561 859 aa20.41■□□□□ 0.86
TMEM260-202ENST00000538838 LOC100509620A0A075B734 347 aa20.4■□□□□ 0.86
TMEM260-202ENST00000538838 CLDN1O95832 211 aa20.4■□□□□ 0.86
TMEM260-202ENST00000538838 DBHP09172 617 aa20.4■□□□□ 0.86
TMEM260-202ENST00000538838 H2BFMP0C1H6 154 aa20.4■□□□□ 0.86
TMEM260-202ENST00000538838 STOMP27105 288 aa20.4■□□□□ 0.86
TMEM260-202ENST00000538838 ROM1Q03395 351 aa20.4■□□□□ 0.86
TMEM260-202ENST00000538838 EGR3Q06889 387 aa20.4■□□□□ 0.86
TMEM260-202ENST00000538838 TAF13Q15543 124 aa20.4■□□□□ 0.86
TMEM260-202ENST00000538838 PLEKHG7Q6ZR37 379 aa20.4■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms