RNA–Protein interactions for RNA: ENST00000538834.5

CD9-208, Transcript of CD9 molecule, humanhuman

TSL 5

Gene CD9, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-208ENST00000538834 ERFP50548 548 aa11.73□□□□□ -0.53
CD9-208ENST00000538834 MMP15P51511 669 aa11.73□□□□□ -0.53
CD9-208ENST00000538834 ACTR3P61158 418 aa11.73□□□□□ -0.53
CD9-208ENST00000538834 CRMP1Q14194 572 aa11.73□□□□□ -0.53
CD9-208ENST00000538834 RFPL4BQ6ZWI9 263 aa11.73□□□□□ -0.53
CD9-208ENST00000538834 ZNF525Q8N782 197 aa11.73□□□□□ -0.53
CD9-208ENST00000538834 CYB561A3Q8NBI2 242 aa11.73□□□□□ -0.53
CD9-208ENST00000538834 GJC3Q8NFK1 279 aa11.73□□□□□ -0.53
CD9-208ENST00000538834 OR10S1Q8NGN2 331 aa11.73□□□□□ -0.53
CD9-208ENST00000538834 OR2T4Q8NH00 348 aa11.73□□□□□ -0.53
CD9-208ENST00000538834 NEU4Q8WWR8 484 aaPredicted RBP11.73□□□□□ -0.53
CD9-208ENST00000538834 C4orf45Q96LM5 186 aa11.73□□□□□ -0.53
CD9-208ENST00000538834 DCLRE1CQ96SD1 692 aaKnown RBP11.73□□□□□ -0.53
CD9-208ENST00000538834 COQ7Q99807 217 aa11.73□□□□□ -0.53
CD9-208ENST00000538834 SMR3AQ99954 134 aa11.73□□□□□ -0.53
CD9-208ENST00000538834 HCAR1Q9BXC0 346 aa11.73□□□□□ -0.53
CD9-208ENST00000538834 REG4Q9BYZ8 158 aa11.73□□□□□ -0.53
CD9-208ENST00000538834 GABARAPL1Q9H0R8 117 aa11.73□□□□□ -0.53
CD9-208ENST00000538834 MS4A5Q9H3V2 200 aa11.73□□□□□ -0.53
CD9-208ENST00000538834 MYOZ1Q9NP98 299 aaPredicted RBP11.73□□□□□ -0.53
CD9-208ENST00000538834 NKIRAS2Q9NYR9 191 aa11.73□□□□□ -0.53
CD9-208ENST00000538834 AP4S1Q9Y587 144 aa11.73□□□□□ -0.53
CD9-208ENST00000538834 NAV3Q8IVL0 2385 aa11.72□□□□□ -0.53
CD9-208ENST00000538834 NDUFS8O00217 210 aa11.72□□□□□ -0.53
CD9-208ENST00000538834 GNGT2O14610 69 aa11.72□□□□□ -0.53
CD9-208ENST00000538834 DOK2O60496 412 aa11.72□□□□□ -0.53
CD9-208ENST00000538834 CSF3P09919 207 aa11.72□□□□□ -0.53
CD9-208ENST00000538834 SPI1P17947 270 aa11.72□□□□□ -0.53
CD9-208ENST00000538834 NUDT6P53370 316 aa11.72□□□□□ -0.53
CD9-208ENST00000538834 ELFN2Q5R3F8 820 aa11.72□□□□□ -0.53
CD9-208ENST00000538834 C1orf146Q5VVC0 180 aa11.72□□□□□ -0.53
CD9-208ENST00000538834 KDM4DQ6B0I6 523 aa11.72□□□□□ -0.53
CD9-208ENST00000538834 CFAP77Q6ZQR2 320 aa11.72□□□□□ -0.53
CD9-208ENST00000538834 ZNF786Q8N393 782 aa11.72□□□□□ -0.53
CD9-208ENST00000538834 OR1J1Q8NGS3 322 aa11.72□□□□□ -0.53
CD9-208ENST00000538834 OR1F12Q8NHA8 337 aa11.72□□□□□ -0.53
CD9-208ENST00000538834 SYNPRQ8TBG9 265 aa11.72□□□□□ -0.53
CD9-208ENST00000538834 KLF14Q8TD94 323 aaPredicted RBP11.72□□□□□ -0.53
CD9-208ENST00000538834 IPCEF1Q8WWN9 437 aaPredicted RBP11.72□□□□□ -0.53
CD9-208ENST00000538834 MAP6Q96JE9 813 aa11.72□□□□□ -0.53
CD9-208ENST00000538834 SYT3Q9BQG1 590 aa11.72□□□□□ -0.53
CD9-208ENST00000538834 HDHD2Q9H0R4 259 aa11.72□□□□□ -0.53
CD9-208ENST00000538834 RAB1BQ9H0U4 201 aa11.72□□□□□ -0.53
CD9-208ENST00000538834 PLEK2Q9NYT0 353 aa11.72□□□□□ -0.53
CD9-208ENST00000538834 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.72□□□□□ -0.53
CD9-208ENST00000538834 A0A1B0GWJ7 208 aa11.71□□□□□ -0.53
CD9-208ENST00000538834 E9PQ18 207 aa11.71□□□□□ -0.53
CD9-208ENST00000538834 H3BNX3 289 aa11.71□□□□□ -0.53
CD9-208ENST00000538834 M0R233 179 aa11.71□□□□□ -0.53
CD9-208ENST00000538834 SURF4O15260 269 aa11.71□□□□□ -0.53
CD9-208ENST00000538834 LY6G6DO95868 133 aa11.71□□□□□ -0.53
CD9-208ENST00000538834 ADRA2AP08913 450 aa11.71□□□□□ -0.53
CD9-208ENST00000538834 CLUP10909 449 aa11.71□□□□□ -0.53
CD9-208ENST00000538834 SLC25A16P16260 332 aa11.71□□□□□ -0.53
CD9-208ENST00000538834 SLC2A5P22732 501 aa11.71□□□□□ -0.53
CD9-208ENST00000538834 FASP25445 335 aa11.71□□□□□ -0.53
CD9-208ENST00000538834 PYCR1P32322 319 aa11.71□□□□□ -0.53
CD9-208ENST00000538834 MPV17P39210 176 aa11.71□□□□□ -0.53
CD9-208ENST00000538834 CENPAP49450 140 aa11.71□□□□□ -0.53
CD9-208ENST00000538834 KLF3P57682 345 aaPredicted RBP11.71□□□□□ -0.53
CD9-208ENST00000538834 PPP1CBP62140 327 aa11.71□□□□□ -0.53
CD9-208ENST00000538834 MRPS11P82912 194 aaKnown RBP11.71□□□□□ -0.53
CD9-208ENST00000538834 LOXL1Q08397 574 aaPredicted RBP11.71□□□□□ -0.53
CD9-208ENST00000538834 RIN1Q13671 783 aa11.71□□□□□ -0.53
CD9-208ENST00000538834 GINS1Q14691 196 aa11.71□□□□□ -0.53
CD9-208ENST00000538834 SLC27A4Q6P1M0 643 aa11.71□□□□□ -0.53
CD9-208ENST00000538834 LYPD4Q6UWN0 246 aa11.71□□□□□ -0.53
CD9-208ENST00000538834 CCDC121Q6ZUS5 278 aa11.71□□□□□ -0.53
CD9-208ENST00000538834 SLC25A40Q8TBP6 338 aa11.71□□□□□ -0.53
CD9-208ENST00000538834 TEX47Q8TBZ9 253 aa11.71□□□□□ -0.53
CD9-208ENST00000538834 SLC7A6Q92536 515 aa11.71□□□□□ -0.53
CD9-208ENST00000538834 OR2J1Q9GZK6 312 aa11.71□□□□□ -0.53
CD9-208ENST00000538834 POFUT1Q9H488 388 aa11.71□□□□□ -0.53
CD9-208ENST00000538834 RERGLQ9H628 205 aa11.71□□□□□ -0.53
CD9-208ENST00000538834 ELOVL3Q9HB03 270 aa11.71□□□□□ -0.53
CD9-208ENST00000538834 DDX28Q9NUL7 540 aaKnown RBP11.71□□□□□ -0.53
CD9-208ENST00000538834 TMEFF2Q9UIK5 374 aaPredicted RBP11.71□□□□□ -0.53
CD9-208ENST00000538834 FZR1Q9UM11 496 aa11.71□□□□□ -0.53
CD9-208ENST00000538834 STARD10Q9Y365 291 aa11.71□□□□□ -0.53
CD9-208ENST00000538834 COMMD3-BMI1R4GMX3 469 aa11.71□□□□□ -0.53
CD9-208ENST00000538834 LOC390937A0A1W2PQ73 354 aa11.7□□□□□ -0.54
CD9-208ENST00000538834 C17orf100A8MU93 164 aa11.7□□□□□ -0.54
CD9-208ENST00000538834 FAM171A2A8MVW0 826 aa11.7□□□□□ -0.54
CD9-208ENST00000538834 RNF223E7ERA6 249 aa11.7□□□□□ -0.54
CD9-208ENST00000538834 EBAG9O00559 213 aa11.7□□□□□ -0.54
CD9-208ENST00000538834 E2F6O75461 281 aa11.7□□□□□ -0.54
CD9-208ENST00000538834 HEXAP06865 529 aa11.7□□□□□ -0.54
CD9-208ENST00000538834 DBHP09172 617 aa11.7□□□□□ -0.54
CD9-208ENST00000538834 KITLGP21583 273 aa11.7□□□□□ -0.54
CD9-208ENST00000538834 HTR5AP47898 357 aa11.7□□□□□ -0.54
CD9-208ENST00000538834 CRISP1P54107 249 aa11.7□□□□□ -0.54
CD9-208ENST00000538834 ESRRGP62508 458 aa11.7□□□□□ -0.54
CD9-208ENST00000538834 MAD2L1BPQ15013 274 aaPredicted RBP11.7□□□□□ -0.54
CD9-208ENST00000538834 ZNF718Q3SXZ3 478 aa11.7□□□□□ -0.54
CD9-208ENST00000538834 CORO6Q6QEF8 472 aa11.7□□□□□ -0.54
CD9-208ENST00000538834 UNQ6126/PRO20091Q6UXV3 157 aa11.7□□□□□ -0.54
CD9-208ENST00000538834 HIPK1Q86Z02 1210 aa11.7□□□□□ -0.54
CD9-208ENST00000538834 IQCF1Q8N6M8 205 aa11.7□□□□□ -0.54
CD9-208ENST00000538834 OR9Q1Q8NGQ5 310 aa11.7□□□□□ -0.54
CD9-208ENST00000538834 ST7LQ8TDW4 575 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms