RNA–Protein interactions for RNA: ENST00000538827.5

CD4-208, Transcript of CD4 molecule, humanhuman

TSL 1 (best)

Gene CD4, Length 985 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-208ENST00000538827 HIKESHIQ53FT3 197 aa12.39□□□□□ -0.43
CD4-208ENST00000538827 OR7E24Q6IFN5 339 aa12.39□□□□□ -0.43
CD4-208ENST00000538827 ANKRD16Q6P6B7 361 aa12.39□□□□□ -0.43
CD4-208ENST00000538827 KCTD18Q6PI47 426 aaPredicted RBP12.39□□□□□ -0.43
CD4-208ENST00000538827 BEND4Q6ZU67 534 aa12.39□□□□□ -0.43
CD4-208ENST00000538827 TUBA1AQ71U36 451 aa12.39□□□□□ -0.43
CD4-208ENST00000538827 GPR141Q7Z602 305 aa12.39□□□□□ -0.43
CD4-208ENST00000538827 CXorf67Q86X51 503 aaPredicted RBP12.39□□□□□ -0.43
CD4-208ENST00000538827 SKA3Q8IX90 412 aa12.39□□□□□ -0.43
CD4-208ENST00000538827 ZFP41Q8N8Y5 198 aa12.39□□□□□ -0.43
CD4-208ENST00000538827 ST7LQ8TDW4 575 aa12.39□□□□□ -0.43
CD4-208ENST00000538827 NANOS1Q8WY41 292 aaKnown RBP12.39□□□□□ -0.43
CD4-208ENST00000538827 FBXO17Q96EF6 278 aa12.39□□□□□ -0.43
CD4-208ENST00000538827 MAP6Q96JE9 813 aa12.39□□□□□ -0.43
CD4-208ENST00000538827 OR8B4Q96RC9 309 aa12.39□□□□□ -0.43
CD4-208ENST00000538827 ZNF649Q9BS31 505 aa12.39□□□□□ -0.43
CD4-208ENST00000538827 GALNT8Q9NY28 637 aa12.39□□□□□ -0.43
CD4-208ENST00000538827 SLCO1C1Q9NYB5 712 aa12.39□□□□□ -0.43
CD4-208ENST00000538827 CYB5R1Q9UHQ9 305 aa12.39□□□□□ -0.43
CD4-208ENST00000538827 LSM2Q9Y333 95 aaKnown RBP12.39□□□□□ -0.43
CD4-208ENST00000538827 GRIP1Q9Y3R0 1128 aa12.39□□□□□ -0.43
CD4-208ENST00000538827 NCOA6Q14686 2063 aaPredicted RBP12.38□□□□□ -0.43
CD4-208ENST00000538827 METTL15A6NJ78 407 aa12.38□□□□□ -0.43
CD4-208ENST00000538827 ZNF878C9JN71 531 aa12.38□□□□□ -0.43
CD4-208ENST00000538827 RER1O15258 196 aa12.38□□□□□ -0.43
CD4-208ENST00000538827 DOK2O60496 412 aa12.38□□□□□ -0.43
CD4-208ENST00000538827 CNOT4O95628 575 aaKnown RBP12.38□□□□□ -0.43
CD4-208ENST00000538827 TFAP2AP05549 437 aa12.38□□□□□ -0.43
CD4-208ENST00000538827 ZNF32P17041 273 aa12.38□□□□□ -0.43
CD4-208ENST00000538827 JUNBP17275 347 aaPredicted RBP12.38□□□□□ -0.43
CD4-208ENST00000538827 COX5AP20674 150 aa12.38□□□□□ -0.43
CD4-208ENST00000538827 IL32P24001 234 aa12.38□□□□□ -0.43
CD4-208ENST00000538827 RIDAP52758 137 aaKnown RBP12.38□□□□□ -0.43
CD4-208ENST00000538827 GBX2P52951 348 aaPredicted RBP12.38□□□□□ -0.43
CD4-208ENST00000538827 GP2P55259 537 aaKnown RBP12.38□□□□□ -0.43
CD4-208ENST00000538827 EGR3Q06889 387 aa12.38□□□□□ -0.43
CD4-208ENST00000538827 DOC2BQ14184 412 aa12.38□□□□□ -0.43
CD4-208ENST00000538827 PCK2Q16822 640 aa12.38□□□□□ -0.43
CD4-208ENST00000538827 TBRG1Q3YBR2 411 aa12.38□□□□□ -0.43
CD4-208ENST00000538827 SLC36A2Q495M3 483 aa12.38□□□□□ -0.43
CD4-208ENST00000538827 FAM27BQ5VT28 67 aa12.38□□□□□ -0.43
CD4-208ENST00000538827 ZNF787Q6DD87 383 aa12.38□□□□□ -0.43
CD4-208ENST00000538827 SATL1Q86VE3 508 aa12.38□□□□□ -0.43
CD4-208ENST00000538827 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.38□□□□□ -0.43
CD4-208ENST00000538827 SYS1Q8N2H4 156 aa12.38□□□□□ -0.43
CD4-208ENST00000538827 ZNF433Q8N7K0 673 aaPredicted RBP12.38□□□□□ -0.43
CD4-208ENST00000538827 RELL2Q8NC24 303 aaPredicted RBP12.38□□□□□ -0.43
CD4-208ENST00000538827 GALNT11Q8NCW6 608 aa12.38□□□□□ -0.43
CD4-208ENST00000538827 AKR7LQ8NHP1 331 aa12.38□□□□□ -0.43
CD4-208ENST00000538827 PRR7Q8TB68 274 aa12.38□□□□□ -0.43
CD4-208ENST00000538827 ELOVL3Q9HB03 270 aa12.38□□□□□ -0.43
CD4-208ENST00000538827 TRIM36Q9NQ86 728 aa12.38□□□□□ -0.43
CD4-208ENST00000538827 PLEK2Q9NYT0 353 aa12.38□□□□□ -0.43
CD4-208ENST00000538827 MRM2Q9UI43 246 aaKnown RBP12.38□□□□□ -0.43
CD4-208ENST00000538827 GTF2A1LQ9UNN4 478 aa12.38□□□□□ -0.43
CD4-208ENST00000538827 LRP12Q9Y561 859 aa12.38□□□□□ -0.43
CD4-208ENST00000538827 CACNA1CQ13936 2221 aa12.37□□□□□ -0.43
CD4-208ENST00000538827 FAM90A27PA6NNH2 459 aa12.37□□□□□ -0.43
CD4-208ENST00000538827 MSTNO14793 375 aa12.37□□□□□ -0.43
CD4-208ENST00000538827 SGCEO43556 437 aa12.37□□□□□ -0.43
CD4-208ENST00000538827 HLA-HP01893 362 aa12.37□□□□□ -0.43
CD4-208ENST00000538827 TACSTD2P09758 323 aa12.37□□□□□ -0.43
CD4-208ENST00000538827 HSD11B1P28845 292 aa12.37□□□□□ -0.43
CD4-208ENST00000538827 ALDH3B2P48448 385 aa12.37□□□□□ -0.43
CD4-208ENST00000538827 UBE2NP61088 152 aaKnown RBP12.37□□□□□ -0.43
CD4-208ENST00000538827 PCBD1P61457 104 aa12.37□□□□□ -0.43
CD4-208ENST00000538827 RAB35Q15286 201 aa12.37□□□□□ -0.43
CD4-208ENST00000538827 NRN1LQ496H8 165 aa12.37□□□□□ -0.43
CD4-208ENST00000538827 ARMCX4Q5H9R4 360 aa12.37□□□□□ -0.43
CD4-208ENST00000538827 TMEM53Q6P2H8 277 aa12.37□□□□□ -0.43
CD4-208ENST00000538827 VASH1Q7L8A9 365 aaPredicted RBP12.37□□□□□ -0.43
CD4-208ENST00000538827 BHLHA15Q7RTS1 189 aaPredicted RBP12.37□□□□□ -0.43
CD4-208ENST00000538827 MRGPRGQ86SM5 289 aa12.37□□□□□ -0.43
CD4-208ENST00000538827 GABRG1Q8N1C3 465 aa12.37□□□□□ -0.43
CD4-208ENST00000538827 GJC3Q8NFK1 279 aa12.37□□□□□ -0.43
CD4-208ENST00000538827 OR10S1Q8NGN2 331 aa12.37□□□□□ -0.43
CD4-208ENST00000538827 FGFBP3Q8TAT2 258 aa12.37□□□□□ -0.43
CD4-208ENST00000538827 BCL2L2Q92843 193 aaPredicted RBP12.37□□□□□ -0.43
CD4-208ENST00000538827 UFD1Q92890 307 aa12.37□□□□□ -0.43
CD4-208ENST00000538827 TMIGD2Q96BF3 282 aa12.37□□□□□ -0.43
CD4-208ENST00000538827 PELI1Q96FA3 418 aa12.37□□□□□ -0.43
CD4-208ENST00000538827 OPALINQ96PE5 141 aa12.37□□□□□ -0.43
CD4-208ENST00000538827 MGLLQ99685 303 aa12.37□□□□□ -0.43
CD4-208ENST00000538827 MROQ9BYG7 248 aa12.37□□□□□ -0.43
CD4-208ENST00000538827 ZFHX3Q15911 3703 aa12.37□□□□□ -0.43
CD4-208ENST00000538827 A0A1W2PR80 420 aa12.36□□□□□ -0.43
CD4-208ENST00000538827 UBL3O95164 117 aa12.36□□□□□ -0.43
CD4-208ENST00000538827 LALBAP00709 142 aa12.36□□□□□ -0.43
CD4-208ENST00000538827 HTR5AP47898 357 aa12.36□□□□□ -0.43
CD4-208ENST00000538827 GTF2A1P52655 376 aaPredicted RBP12.36□□□□□ -0.43
CD4-208ENST00000538827 TAS2R43P59537 309 aa12.36□□□□□ -0.43
CD4-208ENST00000538827 MLLT11Q13015 90 aaPredicted RBP12.36□□□□□ -0.43
CD4-208ENST00000538827 CCDC92Q53HC0 331 aaPredicted RBP12.36□□□□□ -0.43
CD4-208ENST00000538827 ELFN2Q5R3F8 820 aa12.36□□□□□ -0.43
CD4-208ENST00000538827 ZNF774Q6NX45 483 aa12.36□□□□□ -0.43
CD4-208ENST00000538827 ZNF474Q6S9Z5 364 aaPredicted RBP12.36□□□□□ -0.43
CD4-208ENST00000538827 ARL9Q6T311 187 aa12.36□□□□□ -0.43
CD4-208ENST00000538827 ZNF627Q7L945 461 aa12.36□□□□□ -0.43
CD4-208ENST00000538827 LIX1LQ8IVB5 337 aa12.36□□□□□ -0.43
CD4-208ENST00000538827 ZNF679Q8IYX0 411 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms