RNA–Protein interactions for RNA: ENST00000538253.5

PTPN22-211, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

TSL 1 (best) BASIC

Gene PTPN22, Length 3,575 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-211ENST00000538253 OR13C3Q8NGS6 347 aa3.17□□□□□ -1.9
PTPN22-211ENST00000538253 PPP1R35Q8TAP8 253 aa3.17□□□□□ -1.9
PTPN22-211ENST00000538253 ZNF596Q8TC21 504 aa3.17□□□□□ -1.9
PTPN22-211ENST00000538253 PYDC1Q8WXC3 89 aa3.17□□□□□ -1.9
PTPN22-211ENST00000538253 RFT1Q96AA3 541 aa3.17□□□□□ -1.9
PTPN22-211ENST00000538253 PFDN5Q99471 154 aa3.17□□□□□ -1.9
PTPN22-211ENST00000538253 DCUN1D5Q9BTE7 237 aa3.17□□□□□ -1.9
PTPN22-211ENST00000538253 IFT27Q9BW83 186 aa3.17□□□□□ -1.9
PTPN22-211ENST00000538253 HDHD2Q9H0R4 259 aa3.17□□□□□ -1.9
PTPN22-211ENST00000538253 GABARAPL1Q9H0R8 117 aa3.17□□□□□ -1.9
PTPN22-211ENST00000538253 POFUT1Q9H488 388 aa3.17□□□□□ -1.9
PTPN22-211ENST00000538253 UNKLQ9H9P5 680 aaKnown RBP3.17□□□□□ -1.9
PTPN22-211ENST00000538253 PROK2Q9HC23 129 aa3.17□□□□□ -1.9
PTPN22-211ENST00000538253 INPP5EQ9NRR6 644 aa3.17□□□□□ -1.9
PTPN22-211ENST00000538253 SPRR3Q9UBC9 169 aa3.17□□□□□ -1.9
PTPN22-211ENST00000538253 POMPQ9Y244 141 aa3.17□□□□□ -1.9
PTPN22-211ENST00000538253 TIMM10BQ9Y5J6 103 aa3.17□□□□□ -1.9
PTPN22-211ENST00000538253 PUS1Q9Y606 427 aaKnown RBP eCLIP3.17□□□□□ -1.9
PTPN22-211ENST00000538253 KCNE3Q9Y6H6 103 aa3.17□□□□□ -1.9
PTPN22-211ENST00000538253 G3V2T6 193 aa3.17□□□□□ -1.9
PTPN22-211ENST00000538253 H3BN98 237 aa3.17□□□□□ -1.9
PTPN22-211ENST00000538253 M0R082 166 aa3.17□□□□□ -1.9
PTPN22-211ENST00000538253 PLPP3O14495 311 aa3.17□□□□□ -1.9
PTPN22-211ENST00000538253 DENRO43583 198 aaKnown RBP3.17□□□□□ -1.9
PTPN22-211ENST00000538253 ZNF432O94892 652 aa3.17□□□□□ -1.9
PTPN22-211ENST00000538253 ZFPL1O95159 310 aa3.17□□□□□ -1.9
PTPN22-211ENST00000538253 CST2P09228 141 aa3.17□□□□□ -1.9
PTPN22-211ENST00000538253 TACSTD2P09758 323 aa3.17□□□□□ -1.9
PTPN22-211ENST00000538253 GAAP10253 952 aa3.17□□□□□ -1.9
PTPN22-211ENST00000538253 OSMP13725 252 aa3.17□□□□□ -1.9
PTPN22-211ENST00000538253 ZNF23P17027 643 aa3.17□□□□□ -1.9
PTPN22-211ENST00000538253 SDHAP31040 664 aa3.17□□□□□ -1.9
PTPN22-211ENST00000538253 UGT2B10P36537 528 aa3.17□□□□□ -1.9
PTPN22-211ENST00000538253 ZNF136P52737 540 aa3.17□□□□□ -1.9
PTPN22-211ENST00000538253 SUCLG1P53597 346 aaKnown RBP3.17□□□□□ -1.9
PTPN22-211ENST00000538253 CLDN17P56750 224 aa3.17□□□□□ -1.9
PTPN22-211ENST00000538253 SIRPAP78324 504 aa3.17□□□□□ -1.9
PTPN22-211ENST00000538253 MRPS34P82930 218 aaKnown RBP3.17□□□□□ -1.9
PTPN22-211ENST00000538253 ARF1P84077 181 aaKnown RBP3.17□□□□□ -1.9
PTPN22-211ENST00000538253 FUT5Q11128 374 aa3.17□□□□□ -1.9
PTPN22-211ENST00000538253 SELPLGQ14242 412 aa3.17□□□□□ -1.9
PTPN22-211ENST00000538253 PRSS53Q2L4Q9 553 aa3.17□□□□□ -1.9
PTPN22-211ENST00000538253 KLHL22Q53GT1 634 aa3.17□□□□□ -1.9
PTPN22-211ENST00000538253 AGAP6Q5VW22 663 aa3.17□□□□□ -1.9
PTPN22-211ENST00000538253 LINC00114Q6XXX2 140 aa3.17□□□□□ -1.9
PTPN22-211ENST00000538253 C16orf47Q6ZP98 133 aaPredicted RBP3.17□□□□□ -1.9
PTPN22-211ENST00000538253 GPAT4Q86UL3 456 aa3.17□□□□□ -1.9
PTPN22-211ENST00000538253 TMEM200AQ86VY9 491 aa3.17□□□□□ -1.9
PTPN22-211ENST00000538253 TGIF2LXQ8IUE1 241 aa3.17□□□□□ -1.9
PTPN22-211ENST00000538253 NOXO1Q8NFA2 376 aa3.17□□□□□ -1.9
PTPN22-211ENST00000538253 BBS1Q8NFJ9 593 aa3.17□□□□□ -1.9
PTPN22-211ENST00000538253 OR4M2Q8NGB6 313 aa3.17□□□□□ -1.9
PTPN22-211ENST00000538253 RNASE11Q8TAA1 199 aaKnown RBP3.17□□□□□ -1.9
PTPN22-211ENST00000538253 ZNF417Q8TAU3 575 aa3.17□□□□□ -1.9
PTPN22-211ENST00000538253 DOK4Q8TEW6 326 aa3.17□□□□□ -1.9
PTPN22-211ENST00000538253 MAL2Q969L2 176 aa3.17□□□□□ -1.9
PTPN22-211ENST00000538253 FOXRED1Q96CU9 486 aaPredicted RBP3.17□□□□□ -1.9
PTPN22-211ENST00000538253 RNF31Q96EP0 1072 aa3.17□□□□□ -1.9
PTPN22-211ENST00000538253 BSCL2Q96G97 398 aaPredicted RBP3.17□□□□□ -1.9
PTPN22-211ENST00000538253 FAM71F1Q96KD3 344 aaPredicted RBP3.17□□□□□ -1.9
PTPN22-211ENST00000538253 HS3ST6Q96QI5 342 aa3.17□□□□□ -1.9
PTPN22-211ENST00000538253 ZNF587Q96SQ5 575 aaPredicted RBP3.17□□□□□ -1.9
PTPN22-211ENST00000538253 SEPHS2Q99611 448 aa3.17□□□□□ -1.9
PTPN22-211ENST00000538253 NPAS1Q99742 590 aa3.17□□□□□ -1.9
PTPN22-211ENST00000538253 ZNF426Q9BUY5 554 aa3.17□□□□□ -1.9
PTPN22-211ENST00000538253 KATNB1Q9BVA0 655 aa3.17□□□□□ -1.9
PTPN22-211ENST00000538253 HES7Q9BYE0 225 aa3.17□□□□□ -1.9
PTPN22-211ENST00000538253 RGCCQ9H4X1 137 aa3.17□□□□□ -1.9
PTPN22-211ENST00000538253 MOB1AQ9H8S9 216 aa3.17□□□□□ -1.9
PTPN22-211ENST00000538253 BEX4Q9NWD9 120 aaPredicted RBP3.17□□□□□ -1.9
PTPN22-211ENST00000538253 CLN6Q9NWW5 311 aa3.17□□□□□ -1.9
PTPN22-211ENST00000538253 SLCO1C1Q9NYB5 712 aa3.17□□□□□ -1.9
PTPN22-211ENST00000538253 USE1Q9NZ43 259 aa3.17□□□□□ -1.9
PTPN22-211ENST00000538253 PTPRQQ9UMZ3 2332 aa3.17□□□□□ -1.9
PTPN22-211ENST00000538253 ACACBO00763 2458 aa3.17□□□□□ -1.9
PTPN22-211ENST00000538253 A0A1W2PS29 197 aa3.17□□□□□ -1.9
PTPN22-211ENST00000538253 C5orf51A6NDU8 294 aa3.17□□□□□ -1.9
PTPN22-211ENST00000538253 OR5H1A6NKK0 313 aa3.17□□□□□ -1.9
PTPN22-211ENST00000538253 FAM90A27PA6NNH2 459 aa3.17□□□□□ -1.9
PTPN22-211ENST00000538253 PRODHO43272 600 aa3.17□□□□□ -1.9
PTPN22-211ENST00000538253 TGM6O95932 706 aa3.17□□□□□ -1.9
PTPN22-211ENST00000538253 OPN1SWP03999 348 aa3.17□□□□□ -1.9
PTPN22-211ENST00000538253 NUDT7P0C024 238 aa3.17□□□□□ -1.9
PTPN22-211ENST00000538253 RFPL3SP0C7P2 107 aa3.17□□□□□ -1.9
PTPN22-211ENST00000538253 GKN3PP0CG01 181 aa3.17□□□□□ -1.9
PTPN22-211ENST00000538253 SMIM6P0DI80 62 aa3.17□□□□□ -1.9
PTPN22-211ENST00000538253 MSR1P21757 451 aa3.17□□□□□ -1.9
PTPN22-211ENST00000538253 BMP5P22003 454 aa3.17□□□□□ -1.9
PTPN22-211ENST00000538253 CRYGSP22914 178 aa3.17□□□□□ -1.9
PTPN22-211ENST00000538253 GCH1P30793 250 aa3.17□□□□□ -1.9
PTPN22-211ENST00000538253 DDOSTP39656 456 aa3.17□□□□□ -1.9
PTPN22-211ENST00000538253 MAP2K4P45985 399 aa3.17□□□□□ -1.9
PTPN22-211ENST00000538253 ALDH3B2P48448 385 aa3.17□□□□□ -1.9
PTPN22-211ENST00000538253 EFNA3P52797 238 aa3.17□□□□□ -1.9
PTPN22-211ENST00000538253 VAMP2P63027 116 aa3.17□□□□□ -1.9
PTPN22-211ENST00000538253 POU3F1Q03052 451 aaPredicted RBP3.17□□□□□ -1.9
PTPN22-211ENST00000538253 CD47Q08722 323 aa3.17□□□□□ -1.9
PTPN22-211ENST00000538253 KRR1Q13601 381 aaKnown RBP3.17□□□□□ -1.9
PTPN22-211ENST00000538253 APOFQ13790 326 aa3.17□□□□□ -1.9
PTPN22-211ENST00000538253 SLC17A1Q14916 467 aa3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms