RNA–Protein interactions for RNA: ENST00000538235.2

CHFR-216, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 687 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-216ENST00000538235 HRASLS5Q96KN8 279 aa11.27□□□□□ -0.61
CHFR-216ENST00000538235 TRAF4Q9BUZ4 470 aaPredicted RBP11.27□□□□□ -0.61
CHFR-216ENST00000538235 CA10Q9NS85 328 aa11.27□□□□□ -0.61
CHFR-216ENST00000538235 DNAJC27Q9NZQ0 273 aa11.27□□□□□ -0.61
CHFR-216ENST00000538235 NDRG4Q9ULP0 352 aaKnown RBP11.27□□□□□ -0.61
CHFR-216ENST00000538235 COPS3Q9UNS2 423 aa11.27□□□□□ -0.61
CHFR-216ENST00000538235 C12orf71A8MTZ7 269 aa11.26□□□□□ -0.61
CHFR-216ENST00000538235 OVOL3O00110 214 aa11.26□□□□□ -0.61
CHFR-216ENST00000538235 TLX2O43763 284 aaPredicted RBP11.26□□□□□ -0.61
CHFR-216ENST00000538235 APOL3O95236 402 aa11.26□□□□□ -0.61
CHFR-216ENST00000538235 CRYAAP02489 173 aa11.26□□□□□ -0.61
CHFR-216ENST00000538235 RAF1P04049 648 aa11.26□□□□□ -0.61
CHFR-216ENST00000538235 HMGN1P05114 100 aa11.26□□□□□ -0.61
CHFR-216ENST00000538235 ADRA2AP08913 450 aa11.26□□□□□ -0.61
CHFR-216ENST00000538235 MRPL3P09001 348 aaKnown RBP11.26□□□□□ -0.61
CHFR-216ENST00000538235 SPARCP09486 303 aa11.26□□□□□ -0.61
CHFR-216ENST00000538235 NR4A1P22736 598 aa11.26□□□□□ -0.61
CHFR-216ENST00000538235 STOMP27105 288 aa11.26□□□□□ -0.61
CHFR-216ENST00000538235 CDKN1AP38936 164 aa11.26□□□□□ -0.61
CHFR-216ENST00000538235 HTR5AP47898 357 aa11.26□□□□□ -0.61
CHFR-216ENST00000538235 ENTPD1P49961 510 aa11.26□□□□□ -0.61
CHFR-216ENST00000538235 PRSS12P56730 875 aa11.26□□□□□ -0.61
CHFR-216ENST00000538235 ADAM8P78325 824 aa11.26□□□□□ -0.61
CHFR-216ENST00000538235 RAB35Q15286 201 aa11.26□□□□□ -0.61
CHFR-216ENST00000538235 KLHL12Q53G59 568 aa11.26□□□□□ -0.61
CHFR-216ENST00000538235 SYT9Q86SS6 491 aa11.26□□□□□ -0.61
CHFR-216ENST00000538235 NAA40Q86UY6 237 aa11.26□□□□□ -0.61
CHFR-216ENST00000538235 ERI1Q8IV48 349 aaKnown RBP11.26□□□□□ -0.61
CHFR-216ENST00000538235 FAM81AQ8TBF8 368 aa11.26□□□□□ -0.61
CHFR-216ENST00000538235 APH1BQ8WW43 257 aa11.26□□□□□ -0.61
CHFR-216ENST00000538235 DHRS9Q9BPW9 319 aa11.26□□□□□ -0.61
CHFR-216ENST00000538235 TTTY10Q9BZA0 68 aa11.26□□□□□ -0.61
CHFR-216ENST00000538235 MRPL37Q9BZE1 423 aaKnown RBP11.26□□□□□ -0.61
CHFR-216ENST00000538235 RNPEPL1Q9HAU8 725 aa11.26□□□□□ -0.61
CHFR-216ENST00000538235 PLEK2Q9NYT0 353 aa11.26□□□□□ -0.61
CHFR-216ENST00000538235 LAMP3Q9UQV4 416 aa11.26□□□□□ -0.61
CHFR-216ENST00000538235 POLR1DQ9Y2S0 133 aa11.26□□□□□ -0.61
CHFR-216ENST00000538235 TIMM10BQ9Y5J6 103 aa11.26□□□□□ -0.61
CHFR-216ENST00000538235 C5orf49A4QMS7 147 aa11.25□□□□□ -0.61
CHFR-216ENST00000538235 PRODHO43272 600 aa11.25□□□□□ -0.61
CHFR-216ENST00000538235 ICMTO60725 284 aa11.25□□□□□ -0.61
CHFR-216ENST00000538235 CLPTM1O96005 669 aa11.25□□□□□ -0.61
CHFR-216ENST00000538235 HLA-DQA2P01906 255 aa11.25□□□□□ -0.61
CHFR-216ENST00000538235 TTKP33981 857 aa11.25□□□□□ -0.61
CHFR-216ENST00000538235 RBMXP38159 391 aaKnown RBP11.25□□□□□ -0.61
CHFR-216ENST00000538235 MPV17P39210 176 aa11.25□□□□□ -0.61
CHFR-216ENST00000538235 SCRN3Q0VDG4 424 aa11.25□□□□□ -0.61
CHFR-216ENST00000538235 SWI5Q1ZZU3 235 aa11.25□□□□□ -0.61
CHFR-216ENST00000538235 ALKBH6Q3KRA9 238 aa11.25□□□□□ -0.61
CHFR-216ENST00000538235 ELFN2Q5R3F8 820 aa11.25□□□□□ -0.61
CHFR-216ENST00000538235 SPATA46Q5T0L3 261 aa11.25□□□□□ -0.61
CHFR-216ENST00000538235 SPATC1Q76KD6 591 aa11.25□□□□□ -0.61
CHFR-216ENST00000538235 SHFQ7M4L6 423 aa11.25□□□□□ -0.61
CHFR-216ENST00000538235 SSX6Q7RTT6 188 aa11.25□□□□□ -0.61
CHFR-216ENST00000538235 DPY19L4Q7Z388 723 aa11.25□□□□□ -0.61
CHFR-216ENST00000538235 DCXRQ7Z4W1 244 aa11.25□□□□□ -0.61
CHFR-216ENST00000538235 DPPA2Q7Z7J5 298 aa11.25□□□□□ -0.61
CHFR-216ENST00000538235 ENTHD1Q8IYW4 607 aa11.25□□□□□ -0.61
CHFR-216ENST00000538235 OR6N2Q8NGY6 317 aa11.25□□□□□ -0.61
CHFR-216ENST00000538235 OR1F12Q8NHA8 337 aa11.25□□□□□ -0.61
CHFR-216ENST00000538235 ZNF582Q96NG8 517 aaPredicted RBP11.25□□□□□ -0.61
CHFR-216ENST00000538235 ADGRL4Q9HBW9 690 aa11.25□□□□□ -0.61
CHFR-216ENST00000538235 FAM118AQ9NWS6 357 aa11.25□□□□□ -0.61
CHFR-216ENST00000538235 POU2F3Q9UKI9 436 aa11.25□□□□□ -0.61
CHFR-216ENST00000538235 MAP1AP78559 2803 aaPredicted RBP11.24□□□□□ -0.61
CHFR-216ENST00000538235 ZNF593O00488 134 aaPredicted RBP11.24□□□□□ -0.61
CHFR-216ENST00000538235 MAGEB4O15481 346 aaPredicted RBP11.24□□□□□ -0.61
CHFR-216ENST00000538235 CCNOP22674 350 aa11.24□□□□□ -0.61
CHFR-216ENST00000538235 FMO3P31513 532 aa11.24□□□□□ -0.61
CHFR-216ENST00000538235 OTX1P32242 354 aaPredicted RBP11.24□□□□□ -0.61
CHFR-216ENST00000538235 ADARB1P78563 741 aaKnown RBP11.24□□□□□ -0.61
CHFR-216ENST00000538235 GGTLC2Q14390 218 aa11.24□□□□□ -0.61
CHFR-216ENST00000538235 MAD2L1BPQ15013 274 aaPredicted RBP11.24□□□□□ -0.61
CHFR-216ENST00000538235 TESK1Q15569 626 aa11.24□□□□□ -0.61
CHFR-216ENST00000538235 TBC1D28Q2M2D7 210 aa11.24□□□□□ -0.61
CHFR-216ENST00000538235 TEX30Q5JUR7 227 aa11.24□□□□□ -0.61
CHFR-216ENST00000538235 NXNL2Q5VZ03 156 aa11.24□□□□□ -0.61
CHFR-216ENST00000538235 LAIR2Q6ISS4 152 aa11.24□□□□□ -0.61
CHFR-216ENST00000538235 C20orf204Q6ZNR8 217 aa11.24□□□□□ -0.61
CHFR-216ENST00000538235 INTS14Q96SY0 518 aa11.24□□□□□ -0.61
CHFR-216ENST00000538235 TEAD3Q99594 435 aa11.24□□□□□ -0.61
CHFR-216ENST00000538235 CCL19Q99731 98 aa11.24□□□□□ -0.61
CHFR-216ENST00000538235 ABHD6Q9BV23 337 aa11.24□□□□□ -0.61
CHFR-216ENST00000538235 ZNF442Q9H7R0 627 aa11.24□□□□□ -0.61
CHFR-216ENST00000538235 CDH20Q9HBT6 801 aa11.24□□□□□ -0.61
CHFR-216ENST00000538235 DDX28Q9NUL7 540 aaKnown RBP11.24□□□□□ -0.61
CHFR-216ENST00000538235 SMPD3Q9NY59 655 aaPredicted RBP11.24□□□□□ -0.61
CHFR-216ENST00000538235 FBXL3Q9UKT7 428 aa11.24□□□□□ -0.61
CHFR-216ENST00000538235 ABCA2Q9BZC7 2435 aa11.24□□□□□ -0.61
CHFR-216ENST00000538235 IQCMA0A1B0GVH7 501 aa11.23□□□□□ -0.61
CHFR-216ENST00000538235 ENTPD6O75354 484 aa11.23□□□□□ -0.61
CHFR-216ENST00000538235 WBP4O75554 376 aaKnown RBP11.23□□□□□ -0.61
CHFR-216ENST00000538235 LY6HO94772 140 aa11.23□□□□□ -0.61
CHFR-216ENST00000538235 GNAO1P09471 354 aa11.23□□□□□ -0.61
CHFR-216ENST00000538235 OR4A8P0C604 315 aa11.23□□□□□ -0.61
CHFR-216ENST00000538235 ACSM4P0C7M7 580 aa11.23□□□□□ -0.61
CHFR-216ENST00000538235 COX5BP10606 129 aa11.23□□□□□ -0.61
CHFR-216ENST00000538235 APLNRP35414 380 aa11.23□□□□□ -0.61
CHFR-216ENST00000538235 FABP6P51161 128 aa11.23□□□□□ -0.61
CHFR-216ENST00000538235 RAD23AP54725 363 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms