RNA–Protein interactions for RNA: ENST00000536563.1

CD4-205, Transcript of CD4 molecule, humanhuman

TSL 4

Gene CD4, Length 593 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-205ENST00000536563 TMEM154Q6P9G4 183 aa13.04□□□□□ -0.32
CD4-205ENST00000536563 SHQ1Q6PI26 577 aaKnown RBP13.04□□□□□ -0.32
CD4-205ENST00000536563 ZNF101Q8IZC7 436 aa13.04□□□□□ -0.32
CD4-205ENST00000536563 ZCCHC24Q8N2G6 241 aaKnown RBP13.04□□□□□ -0.32
CD4-205ENST00000536563 SNX33Q8WV41 574 aa13.04□□□□□ -0.32
CD4-205ENST00000536563 DNAJC9Q8WXX5 260 aa13.04□□□□□ -0.32
CD4-205ENST00000536563 UTP4Q969X6 686 aaKnown RBP13.04□□□□□ -0.32
CD4-205ENST00000536563 DDOQ99489 341 aa13.04□□□□□ -0.32
CD4-205ENST00000536563 TEX12Q9BXU0 123 aa13.04□□□□□ -0.32
CD4-205ENST00000536563 KIF17Q9P2E2 1029 aa13.04□□□□□ -0.32
CD4-205ENST00000536563 ATPIF1Q9UII2 106 aa13.04□□□□□ -0.32
CD4-205ENST00000536563 KCNG2Q9UJ96 466 aa13.04□□□□□ -0.32
CD4-205ENST00000536563 GRIP1Q9Y3R0 1128 aa13.04□□□□□ -0.32
CD4-205ENST00000536563 LHFPL6Q9Y693 200 aa13.04□□□□□ -0.32
CD4-205ENST00000536563 ABCA2Q9BZC7 2435 aa13.03□□□□□ -0.32
CD4-205ENST00000536563 IGHV4-30-2A0A087WSY4 118 aa13.03□□□□□ -0.32
CD4-205ENST00000536563 LOC390937A0A1W2PQ73 354 aa13.03□□□□□ -0.32
CD4-205ENST00000536563 OR6C6A6NF89 314 aa13.03□□□□□ -0.32
CD4-205ENST00000536563 H3BSA7 217 aa13.03□□□□□ -0.32
CD4-205ENST00000536563 NDUFS8O00217 210 aa13.03□□□□□ -0.32
CD4-205ENST00000536563 ICMTO60725 284 aa13.03□□□□□ -0.32
CD4-205ENST00000536563 FCGR1AP12314 374 aa13.03□□□□□ -0.32
CD4-205ENST00000536563 DAOP14920 347 aa13.03□□□□□ -0.32
CD4-205ENST00000536563 TUBG1P23258 451 aa13.03□□□□□ -0.32
CD4-205ENST00000536563 FMO3P31513 532 aa13.03□□□□□ -0.32
CD4-205ENST00000536563 GRK5P34947 590 aa13.03□□□□□ -0.32
CD4-205ENST00000536563 SLC25A1P53007 311 aa13.03□□□□□ -0.32
CD4-205ENST00000536563 CCNIQ14094 377 aa13.03□□□□□ -0.32
CD4-205ENST00000536563 CRMP1Q14194 572 aa13.03□□□□□ -0.32
CD4-205ENST00000536563 ATP6AP1Q15904 470 aa13.03□□□□□ -0.32
CD4-205ENST00000536563 CCDC92Q53HC0 331 aaPredicted RBP13.03□□□□□ -0.32
CD4-205ENST00000536563 ZNF362Q5T0B9 420 aaPredicted RBP13.03□□□□□ -0.32
CD4-205ENST00000536563 SPATA46Q5T0L3 261 aa13.03□□□□□ -0.32
CD4-205ENST00000536563 SLC27A4Q6P1M0 643 aa13.03□□□□□ -0.32
CD4-205ENST00000536563 CORO6Q6QEF8 472 aa13.03□□□□□ -0.32
CD4-205ENST00000536563 ASRGL1Q7L266 308 aa13.03□□□□□ -0.32
CD4-205ENST00000536563 HIPK1Q86Z02 1210 aa13.03□□□□□ -0.32
CD4-205ENST00000536563 HS3ST5Q8IZT8 346 aa13.03□□□□□ -0.32
CD4-205ENST00000536563 IQCF1Q8N6M8 205 aa13.03□□□□□ -0.32
CD4-205ENST00000536563 OR5K1Q8NHB7 308 aa13.03□□□□□ -0.32
CD4-205ENST00000536563 SLC25A40Q8TBP6 338 aa13.03□□□□□ -0.32
CD4-205ENST00000536563 C10orf105Q8TEF2 133 aa13.03□□□□□ -0.32
CD4-205ENST00000536563 IPCEF1Q8WWN9 437 aaPredicted RBP13.03□□□□□ -0.32
CD4-205ENST00000536563 COG8Q96MW5 612 aa13.03□□□□□ -0.32
CD4-205ENST00000536563 DCLRE1CQ96SD1 692 aaKnown RBP13.03□□□□□ -0.32
CD4-205ENST00000536563 SMR3AQ99954 134 aa13.03□□□□□ -0.32
CD4-205ENST00000536563 PIMREGQ9BSJ6 248 aa13.03□□□□□ -0.32
CD4-205ENST00000536563 RBM4Q9BWF3 364 aaKnown RBP13.03□□□□□ -0.32
CD4-205ENST00000536563 HDHD2Q9H0R4 259 aa13.03□□□□□ -0.32
CD4-205ENST00000536563 TPK1Q9H3S4 243 aa13.03□□□□□ -0.32
CD4-205ENST00000536563 NTN4Q9HB63 628 aa13.03□□□□□ -0.32
CD4-205ENST00000536563 HINT3Q9NQE9 182 aaKnown RBP13.03□□□□□ -0.32
CD4-205ENST00000536563 TUBG2Q9NRH3 451 aa13.03□□□□□ -0.32
CD4-205ENST00000536563 CMC2Q9NRP2 79 aa13.03□□□□□ -0.32
CD4-205ENST00000536563 TBCCD1Q9NVR7 557 aa13.03□□□□□ -0.32
CD4-205ENST00000536563 MYEF2Q9P2K5 600 aaKnown RBP13.03□□□□□ -0.32
CD4-205ENST00000536563 IGLV3-9A0A075B6K5 115 aa13.02□□□□□ -0.33
CD4-205ENST00000536563 LY6G6DO95868 133 aa13.02□□□□□ -0.33
CD4-205ENST00000536563 NGFP01138 241 aa13.02□□□□□ -0.33
CD4-205ENST00000536563 IGHV3-13P01766 116 aa13.02□□□□□ -0.33
CD4-205ENST00000536563 HMGN1P05114 100 aa13.02□□□□□ -0.33
CD4-205ENST00000536563 NAT2P11245 290 aa13.02□□□□□ -0.33
CD4-205ENST00000536563 PAICSP22234 425 aaKnown RBP13.02□□□□□ -0.33
CD4-205ENST00000536563 RGS6P49758 472 aa13.02□□□□□ -0.33
CD4-205ENST00000536563 BLVRAP53004 296 aa13.02□□□□□ -0.33
CD4-205ENST00000536563 HIST1H3AP68431 136 aa13.02□□□□□ -0.33
CD4-205ENST00000536563 ECH1Q13011 328 aa13.02□□□□□ -0.33
CD4-205ENST00000536563 GINS1Q14691 196 aa13.02□□□□□ -0.33
CD4-205ENST00000536563 ALKBH6Q3KRA9 238 aa13.02□□□□□ -0.33
CD4-205ENST00000536563 ELFN2Q5R3F8 820 aa13.02□□□□□ -0.33
CD4-205ENST00000536563 HIST2H3PS2Q5TEC6 136 aa13.02□□□□□ -0.33
CD4-205ENST00000536563 RFPL4BQ6ZWI9 263 aa13.02□□□□□ -0.33
CD4-205ENST00000536563 HIST2H3AQ71DI3 136 aa13.02□□□□□ -0.33
CD4-205ENST00000536563 LINC00346Q8IVM7 164 aa13.02□□□□□ -0.33
CD4-205ENST00000536563 ZNF540Q8NDQ6 660 aa13.02□□□□□ -0.33
CD4-205ENST00000536563 OR51L1Q8NGJ5 315 aa13.02□□□□□ -0.33
CD4-205ENST00000536563 OR9Q1Q8NGQ5 310 aa13.02□□□□□ -0.33
CD4-205ENST00000536563 KLF14Q8TD94 323 aaPredicted RBP13.02□□□□□ -0.33
CD4-205ENST00000536563 UBASH3BQ8TF42 649 aa13.02□□□□□ -0.33
CD4-205ENST00000536563 OTULINQ96BN8 352 aa13.02□□□□□ -0.33
CD4-205ENST00000536563 DUS3LQ96G46 650 aaKnown RBP13.02□□□□□ -0.33
CD4-205ENST00000536563 MARS2Q96GW9 593 aaKnown RBP13.02□□□□□ -0.33
CD4-205ENST00000536563 PITX2Q99697 317 aa13.02□□□□□ -0.33
CD4-205ENST00000536563 COQ7Q99807 217 aa13.02□□□□□ -0.33
CD4-205ENST00000536563 OR2J1Q9GZK6 312 aa13.02□□□□□ -0.33
CD4-205ENST00000536563 PAPOLBQ9NRJ5 636 aaKnown RBP13.02□□□□□ -0.33
CD4-205ENST00000536563 CYB5R1Q9UHQ9 305 aa13.02□□□□□ -0.33
CD4-205ENST00000536563 PLSCR5A0PG75 271 aa13.01□□□□□ -0.33
CD4-205ENST00000536563 TVP23AA6NH52 213 aa13.01□□□□□ -0.33
CD4-205ENST00000536563 G3V2T6 193 aa13.01□□□□□ -0.33
CD4-205ENST00000536563 HEXAP06865 529 aa13.01□□□□□ -0.33
CD4-205ENST00000536563 SPI1P17947 270 aa13.01□□□□□ -0.33
CD4-205ENST00000536563 GGT2P36268 569 aa13.01□□□□□ -0.33
CD4-205ENST00000536563 DBPQ10586 325 aaPredicted RBP13.01□□□□□ -0.33
CD4-205ENST00000536563 PCGF3Q3KNV8 242 aa13.01□□□□□ -0.33
CD4-205ENST00000536563 MBNL2Q5VZF2 373 aaKnown RBP13.01□□□□□ -0.33
CD4-205ENST00000536563 SLC18B1Q6NT16 456 aa13.01□□□□□ -0.33
CD4-205ENST00000536563 MAPK1IP1LQ8NDC0 245 aa13.01□□□□□ -0.33
CD4-205ENST00000536563 PLEKHA8Q96JA3 519 aa13.01□□□□□ -0.33
CD4-205ENST00000536563 NMNAT2Q9BZQ4 307 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms