RNA–Protein interactions for RNA: ENST00000536295.1

RTN3P1-201, Transcript of reticulon 3 pseudogene 1, humanhuman

BASIC

Gene RTN3P1, Length 711 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3P1-201ENST00000536295 SPRNQ5BIV9 151 aa12.13□□□□□ -0.47
RTN3P1-201ENST00000536295 MTX3Q5HYI7 312 aa12.13□□□□□ -0.47
RTN3P1-201ENST00000536295 FAHD2BQ6P2I3 314 aaPredicted RBP12.13□□□□□ -0.47
RTN3P1-201ENST00000536295 ZER1Q7Z7L7 766 aa12.13□□□□□ -0.47
RTN3P1-201ENST00000536295 JAZF1Q86VZ6 243 aa12.13□□□□□ -0.47
RTN3P1-201ENST00000536295 NPEPL1Q8NDH3 523 aa12.13□□□□□ -0.47
RTN3P1-201ENST00000536295 RAB1CQ92928 201 aa12.13□□□□□ -0.47
RTN3P1-201ENST00000536295 FAHD2AQ96GK7 314 aa12.13□□□□□ -0.47
RTN3P1-201ENST00000536295 C19orf24Q9BVV8 132 aa12.13□□□□□ -0.47
RTN3P1-201ENST00000536295 CD300AQ9UGN4 299 aa12.13□□□□□ -0.47
RTN3P1-201ENST00000536295 ZDHHC8Q9ULC8 765 aa12.13□□□□□ -0.47
RTN3P1-201ENST00000536295 ARL2BPQ9Y2Y0 163 aa12.13□□□□□ -0.47
RTN3P1-201ENST00000536295 STARD10Q9Y365 291 aa12.13□□□□□ -0.47
RTN3P1-201ENST00000536295 DCTN6O00399 190 aa12.12□□□□□ -0.47
RTN3P1-201ENST00000536295 RER1O15258 196 aa12.12□□□□□ -0.47
RTN3P1-201ENST00000536295 TXNDC12O95881 172 aa12.12□□□□□ -0.47
RTN3P1-201ENST00000536295 DBHP09172 617 aa12.12□□□□□ -0.47
RTN3P1-201ENST00000536295 RRM2P31350 389 aa12.12□□□□□ -0.47
RTN3P1-201ENST00000536295 RBMXP38159 391 aaKnown RBP12.12□□□□□ -0.47
RTN3P1-201ENST00000536295 LIPAP38571 399 aa12.12□□□□□ -0.47
RTN3P1-201ENST00000536295 LSM6P62312 80 aaKnown RBP12.12□□□□□ -0.47
RTN3P1-201ENST00000536295 TNFAIP6P98066 277 aaPredicted RBP12.12□□□□□ -0.47
RTN3P1-201ENST00000536295 MEP1BQ16820 701 aa12.12□□□□□ -0.47
RTN3P1-201ENST00000536295 CCDC92Q53HC0 331 aaPredicted RBP12.12□□□□□ -0.47
RTN3P1-201ENST00000536295 ZMAT1Q5H9K5 638 aa12.12□□□□□ -0.47
RTN3P1-201ENST00000536295 ACSM5Q6NUN0 579 aa12.12□□□□□ -0.47
RTN3P1-201ENST00000536295 LEG1Q6P5S2 330 aa12.12□□□□□ -0.47
RTN3P1-201ENST00000536295 SHQ1Q6PI26 577 aaKnown RBP12.12□□□□□ -0.47
RTN3P1-201ENST00000536295 C16orf89Q6UX73 402 aa12.12□□□□□ -0.47
RTN3P1-201ENST00000536295 DEFB107AQ8IZN7 70 aa12.12□□□□□ -0.47
RTN3P1-201ENST00000536295 OR1F12Q8NHA8 337 aa12.12□□□□□ -0.47
RTN3P1-201ENST00000536295 RAB39BQ96DA2 213 aa12.12□□□□□ -0.47
RTN3P1-201ENST00000536295 CMBLQ96DG6 245 aa12.12□□□□□ -0.47
RTN3P1-201ENST00000536295 IFT27Q9BW83 186 aa12.12□□□□□ -0.47
RTN3P1-201ENST00000536295 OR52D1Q9H346 318 aa12.12□□□□□ -0.47
RTN3P1-201ENST00000536295 METTL17Q9H7H0 456 aaPredicted RBP12.12□□□□□ -0.47
RTN3P1-201ENST00000536295 SRA1Q9HD15 236 aaKnown RBP12.12□□□□□ -0.47
RTN3P1-201ENST00000536295 TBCCD1Q9NVR7 557 aa12.12□□□□□ -0.47
RTN3P1-201ENST00000536295 CGGBP1Q9UFW8 167 aaPredicted RBP12.12□□□□□ -0.47
RTN3P1-201ENST00000536295 KLHL21Q9UJP4 597 aa12.12□□□□□ -0.47
RTN3P1-201ENST00000536295 PURGQ9UJV8 347 aaKnown RBP12.12□□□□□ -0.47
RTN3P1-201ENST00000536295 TRAV20A0A0B4J274 112 aa12.11□□□□□ -0.47
RTN3P1-201ENST00000536295 OR6C6A6NF89 314 aa12.11□□□□□ -0.47
RTN3P1-201ENST00000536295 TCF21O43680 179 aa12.11□□□□□ -0.47
RTN3P1-201ENST00000536295 DCTN3O75935 186 aa12.11□□□□□ -0.47
RTN3P1-201ENST00000536295 UBOX5O94941 541 aa12.11□□□□□ -0.47
RTN3P1-201ENST00000536295 IGHV2-5P01817 119 aa12.11□□□□□ -0.47
RTN3P1-201ENST00000536295 ANPEPP15144 967 aa12.11□□□□□ -0.47
RTN3P1-201ENST00000536295 CRABP1P29762 137 aa12.11□□□□□ -0.47
RTN3P1-201ENST00000536295 SLC6A6P31641 620 aa12.11□□□□□ -0.47
RTN3P1-201ENST00000536295 RFX4Q33E94 735 aa12.11□□□□□ -0.47
RTN3P1-201ENST00000536295 LIPNQ5VXI9 398 aa12.11□□□□□ -0.47
RTN3P1-201ENST00000536295 DNM1P34Q6PK57 102 aa12.11□□□□□ -0.47
RTN3P1-201ENST00000536295 CORO6Q6QEF8 472 aa12.11□□□□□ -0.47
RTN3P1-201ENST00000536295 PIGWQ7Z7B1 504 aa12.11□□□□□ -0.47
RTN3P1-201ENST00000536295 ZDHHC21Q8IVQ6 265 aa12.11□□□□□ -0.47
RTN3P1-201ENST00000536295 RFLNBQ8N5W9 214 aa12.11□□□□□ -0.47
RTN3P1-201ENST00000536295 OR2Z1Q8NG97 314 aa12.11□□□□□ -0.47
RTN3P1-201ENST00000536295 OR4K13Q8NH42 304 aa12.11□□□□□ -0.47
RTN3P1-201ENST00000536295 SAMD8Q96LT4 415 aa12.11□□□□□ -0.47
RTN3P1-201ENST00000536295 DCLRE1CQ96SD1 692 aaKnown RBP12.11□□□□□ -0.47
RTN3P1-201ENST00000536295 DIRC2Q96SL1 478 aa12.11□□□□□ -0.47
RTN3P1-201ENST00000536295 NMNAT3Q96T66 252 aa12.11□□□□□ -0.47
RTN3P1-201ENST00000536295 GAL3ST1Q99999 423 aa12.11□□□□□ -0.47
RTN3P1-201ENST00000536295 OCEL1Q9H607 264 aa12.11□□□□□ -0.47
RTN3P1-201ENST00000536295 DCAF16Q9NXF7 216 aa12.11□□□□□ -0.47
RTN3P1-201ENST00000536295 UBAP1Q9NZ09 502 aa12.11□□□□□ -0.47
RTN3P1-201ENST00000536295 PTTG3PQ9NZH4 202 aa12.11□□□□□ -0.47
RTN3P1-201ENST00000536295 METRNQ9UJH8 293 aa12.11□□□□□ -0.47
RTN3P1-201ENST00000536295 TMCC3Q9ULS5 477 aa12.11□□□□□ -0.47
RTN3P1-201ENST00000536295 STAB1Q9NY15 2570 aa12.1□□□□□ -0.47
RTN3P1-201ENST00000536295 PLPP2O43688 288 aa12.1□□□□□ -0.47
RTN3P1-201ENST00000536295 DEAF1O75398 565 aaPredicted RBP12.1□□□□□ -0.47
RTN3P1-201ENST00000536295 PNPP00491 289 aa12.1□□□□□ -0.47
RTN3P1-201ENST00000536295 RENP00797 406 aa12.1□□□□□ -0.47
RTN3P1-201ENST00000536295 CD55P08174 381 aa12.1□□□□□ -0.47
RTN3P1-201ENST00000536295 ADH4P08319 380 aa12.1□□□□□ -0.47
RTN3P1-201ENST00000536295 HIST1H1CP16403 213 aaKnown RBP12.1□□□□□ -0.47
RTN3P1-201ENST00000536295 FPR3P25089 353 aa12.1□□□□□ -0.47
RTN3P1-201ENST00000536295 NOS3P29474 1203 aa12.1□□□□□ -0.47
RTN3P1-201ENST00000536295 IFNGR2P38484 337 aa12.1□□□□□ -0.47
RTN3P1-201ENST00000536295 ERFP50548 548 aa12.1□□□□□ -0.47
RTN3P1-201ENST00000536295 SLC3A1Q07837 685 aa12.1□□□□□ -0.47
RTN3P1-201ENST00000536295 CYP2R1Q6VVX0 501 aa12.1□□□□□ -0.47
RTN3P1-201ENST00000536295 Q6ZR03 302 aa12.1□□□□□ -0.47
RTN3P1-201ENST00000536295 PEG10Q86TG7 708 aaKnown RBP12.1□□□□□ -0.47
RTN3P1-201ENST00000536295 OR5AS1Q8N127 324 aa12.1□□□□□ -0.47
RTN3P1-201ENST00000536295 OR6V1Q8N148 313 aa12.1□□□□□ -0.47
RTN3P1-201ENST00000536295 FN3KQ9H479 309 aa12.1□□□□□ -0.47
RTN3P1-201ENST00000536295 IL1RAPQ9NPH3 570 aa12.1□□□□□ -0.47
RTN3P1-201ENST00000536295 RPRD1BQ9NQG5 326 aaKnown RBP12.1□□□□□ -0.47
RTN3P1-201ENST00000536295 NDE1Q9NXR1 346 aa12.1□□□□□ -0.47
RTN3P1-201ENST00000536295 B9D1Q9UPM9 204 aa12.1□□□□□ -0.47
RTN3P1-201ENST00000536295 LHFPL6Q9Y693 200 aa12.1□□□□□ -0.47
RTN3P1-201ENST00000536295 IGLV1-36A0A0B4J1U3 117 aa12.09□□□□□ -0.47
RTN3P1-201ENST00000536295 RGS9O75916 674 aaPredicted RBP12.09□□□□□ -0.47
RTN3P1-201ENST00000536295 KITLGP21583 273 aa12.09□□□□□ -0.47
RTN3P1-201ENST00000536295 TUBG1P23258 451 aa12.09□□□□□ -0.47
RTN3P1-201ENST00000536295 TNFSF4P23510 183 aa12.09□□□□□ -0.47
RTN3P1-201ENST00000536295 CDK5R2Q13319 367 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms