RNA–Protein interactions for RNA: ENST00000535689.5

SNHG1-202, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-202ENST00000535689 SLC5A10A0PJK1 596 aa2.55□□□□□ -2
SNHG1-202ENST00000535689 SH3PXD2BA1X283 911 aa2.55□□□□□ -2
SNHG1-202ENST00000535689 SAGE2PA6NJ88 616 aa2.55□□□□□ -2
SNHG1-202ENST00000535689 RPL37AP8A6NKH3 93 aa2.55□□□□□ -2
SNHG1-202ENST00000535689 ANKRD30BLA7E2S9 258 aa2.55□□□□□ -2
SNHG1-202ENST00000535689 SRRM4A7MD48 611 aaKnown RBP2.55□□□□□ -2
SNHG1-202ENST00000535689 FAM166BA8MTA8 275 aa2.55□□□□□ -2
SNHG1-202ENST00000535689 HACD1B0YJ81 288 aa2.55□□□□□ -2
SNHG1-202ENST00000535689 KCNK1O00180 336 aa2.55□□□□□ -2
SNHG1-202ENST00000535689 TP53I11O14683 189 aa2.55□□□□□ -2
SNHG1-202ENST00000535689 BCL2L11O43521 198 aa2.55□□□□□ -2
SNHG1-202ENST00000535689 GLSO94925 669 aaPredicted RBP2.55□□□□□ -2
SNHG1-202ENST00000535689 SNX4O95219 450 aa2.55□□□□□ -2
SNHG1-202ENST00000535689 ACTL6AO96019 429 aa2.55□□□□□ -2
SNHG1-202ENST00000535689 HCKP08631 526 aa2.55□□□□□ -2
SNHG1-202ENST00000535689 CSF3P09919 207 aa2.55□□□□□ -2
SNHG1-202ENST00000535689 SLC35G6P0C7Q6 338 aa2.55□□□□□ -2
SNHG1-202ENST00000535689 THRBP10828 461 aa2.55□□□□□ -2
SNHG1-202ENST00000535689 PGAM2P15259 253 aa2.55□□□□□ -2
SNHG1-202ENST00000535689 TBXA2RP21731 343 aa2.55□□□□□ -2
SNHG1-202ENST00000535689 KDELR1P24390 212 aa2.55□□□□□ -2
SNHG1-202ENST00000535689 DEKP35659 375 aaKnown RBP2.55□□□□□ -2
SNHG1-202ENST00000535689 CD79BP40259 229 aa2.55□□□□□ -2
SNHG1-202ENST00000535689 MAGEA5P43359 124 aa2.55□□□□□ -2
SNHG1-202ENST00000535689 GSK3BP49841 420 aa2.55□□□□□ -2
SNHG1-202ENST00000535689 VLDLRP98155 873 aa2.55□□□□□ -2
SNHG1-202ENST00000535689 LOXL1Q08397 574 aaPredicted RBP2.55□□□□□ -2
SNHG1-202ENST00000535689 TFDP2Q14188 446 aa2.55□□□□□ -2
SNHG1-202ENST00000535689 RAB35Q15286 201 aa2.55□□□□□ -2
SNHG1-202ENST00000535689 ZSWIM7Q19AV6 140 aa2.55□□□□□ -2
SNHG1-202ENST00000535689 ZNF311Q5JNZ3 666 aa2.55□□□□□ -2
SNHG1-202ENST00000535689 C6orf52Q5T4I8 152 aa2.55□□□□□ -2
SNHG1-202ENST00000535689 LGSNQ5TDP6 509 aa2.55□□□□□ -2
SNHG1-202ENST00000535689 NCBP2-AS2Q69YL0 99 aa2.55□□□□□ -2
SNHG1-202ENST00000535689 FRMPD2BQ6IN97 320 aa2.55□□□□□ -2
SNHG1-202ENST00000535689 LEG1Q6P5S2 330 aa2.55□□□□□ -2
SNHG1-202ENST00000535689 CLEC2AQ6UVW9 174 aa2.55□□□□□ -2
SNHG1-202ENST00000535689 HSDL2Q6YN16 418 aa2.55□□□□□ -2
SNHG1-202ENST00000535689 ABHD13Q7L211 337 aa2.55□□□□□ -2
SNHG1-202ENST00000535689 SERPINA9Q86WD7 417 aa2.55□□□□□ -2
SNHG1-202ENST00000535689 HSCBQ8IWL3 235 aa2.55□□□□□ -2
SNHG1-202ENST00000535689 ZBED8Q8IZ13 594 aa2.55□□□□□ -2
SNHG1-202ENST00000535689 RPRMLQ8N4K4 120 aa2.55□□□□□ -2
SNHG1-202ENST00000535689 TMEM251Q8N6I4 163 aa2.55□□□□□ -2
SNHG1-202ENST00000535689 RELL2Q8NC24 303 aaPredicted RBP2.55□□□□□ -2
SNHG1-202ENST00000535689 MORN4Q8NDC4 146 aa2.55□□□□□ -2
SNHG1-202ENST00000535689 B3GNT7Q8NFL0 401 aa2.55□□□□□ -2
SNHG1-202ENST00000535689 OR2A1Q8NGT9 310 aa2.55□□□□□ -2
SNHG1-202ENST00000535689 OR8K3Q8NH51 312 aa2.55□□□□□ -2
SNHG1-202ENST00000535689 ZNF418Q8TF45 676 aaPredicted RBP2.55□□□□□ -2
SNHG1-202ENST00000535689 SKA2Q8WVK7 121 aaPredicted RBP2.55□□□□□ -2
SNHG1-202ENST00000535689 ITLN1Q8WWA0 313 aa2.55□□□□□ -2
SNHG1-202ENST00000535689 HAUS1Q96CS2 278 aa2.55□□□□□ -2
SNHG1-202ENST00000535689 RNF157Q96PX1 679 aa2.55□□□□□ -2
SNHG1-202ENST00000535689 TMEM237Q96Q45 408 aa2.55□□□□□ -2
SNHG1-202ENST00000535689 SMIM14Q96QK8 99 aa2.55□□□□□ -2
SNHG1-202ENST00000535689 ST6GALNAC5Q9BVH7 336 aa2.55□□□□□ -2
SNHG1-202ENST00000535689 KIAA1549Q9HCM3 1950 aa2.55□□□□□ -2
SNHG1-202ENST00000535689 DCAF13Q9NV06 445 aaKnown RBP2.55□□□□□ -2
SNHG1-202ENST00000535689 FAM120CQ9NX05 1096 aaKnown RBP2.55□□□□□ -2
SNHG1-202ENST00000535689 CNOT2Q9NZN8 540 aaKnown RBP2.55□□□□□ -2
SNHG1-202ENST00000535689 ATP6V1HQ9UI12 483 aa2.55□□□□□ -2
SNHG1-202ENST00000535689 MMACHCQ9Y4U1 282 aa2.55□□□□□ -2
SNHG1-202ENST00000535689 HEY1Q9Y5J3 304 aa2.55□□□□□ -2
SNHG1-202ENST00000535689 IKBKGQ9Y6K9 419 aa2.55□□□□□ -2
SNHG1-202ENST00000535689 CLCA3PQ9Y6N3 262 aa2.55□□□□□ -2
SNHG1-202ENST00000535689 C15orf38-AP3S2A0A0A6YYH1 394 aa2.54□□□□□ -2
SNHG1-202ENST00000535689 A0A1W2PP18 115 aa2.54□□□□□ -2
SNHG1-202ENST00000535689 FRG2CA6NGY1 282 aa2.54□□□□□ -2
SNHG1-202ENST00000535689 MFSD11O43934 449 aa2.54□□□□□ -2
SNHG1-202ENST00000535689 TRIM3O75382 744 aaPredicted RBP2.54□□□□□ -2
SNHG1-202ENST00000535689 TRAPPC6AO75865 159 aa2.54□□□□□ -2
SNHG1-202ENST00000535689 RENP00797 406 aa2.54□□□□□ -2
SNHG1-202ENST00000535689 C1QAP02745 245 aa2.54□□□□□ -2
SNHG1-202ENST00000535689 CATP04040 527 aaKnown RBP2.54□□□□□ -2
SNHG1-202ENST00000535689 CCDC159P0C7I6 412 aa2.54□□□□□ -2
SNHG1-202ENST00000535689 PNMA6AP0CW24 399 aaPredicted RBP2.54□□□□□ -2
SNHG1-202ENST00000535689 RNH1P13489 461 aaKnown RBP2.54□□□□□ -2
SNHG1-202ENST00000535689 POU2F1P14859 743 aa2.54□□□□□ -2
SNHG1-202ENST00000535689 CPN1P15169 458 aa2.54□□□□□ -2
SNHG1-202ENST00000535689 CCNA2P20248 432 aa2.54□□□□□ -2
SNHG1-202ENST00000535689 GDF1P27539 372 aa2.54□□□□□ -2
SNHG1-202ENST00000535689 SRP14P37108 136 aaKnown RBP2.54□□□□□ -2
SNHG1-202ENST00000535689 RFC3P40938 356 aa2.54□□□□□ -2
SNHG1-202ENST00000535689 TTPAP49638 278 aa2.54□□□□□ -2
SNHG1-202ENST00000535689 TMED10P49755 219 aaKnown RBP2.54□□□□□ -2
SNHG1-202ENST00000535689 P2RY4P51582 365 aa2.54□□□□□ -2
SNHG1-202ENST00000535689 ZNF136P52737 540 aa2.54□□□□□ -2
SNHG1-202ENST00000535689 HSD17B7P56937 341 aa2.54□□□□□ -2
SNHG1-202ENST00000535689 ACTG1P63261 375 aa2.54□□□□□ -2
SNHG1-202ENST00000535689 XIAPP98170 497 aa2.54□□□□□ -2
SNHG1-202ENST00000535689 OGDHQ02218 1023 aa2.54□□□□□ -2
SNHG1-202ENST00000535689 BDH1Q02338 343 aa2.54□□□□□ -2
SNHG1-202ENST00000535689 HSF2Q03933 536 aa2.54□□□□□ -2
SNHG1-202ENST00000535689 RGS1Q08116 209 aa2.54□□□□□ -2
SNHG1-202ENST00000535689 PDZK1IP1Q13113 114 aa2.54□□□□□ -2
SNHG1-202ENST00000535689 SERTAD2Q14140 314 aa2.54□□□□□ -2
SNHG1-202ENST00000535689 DPYSL3Q14195 570 aa2.54□□□□□ -2
SNHG1-202ENST00000535689 TATDN3Q17R31 274 aa2.54□□□□□ -2
SNHG1-202ENST00000535689 TMEM249Q2WGJ8 235 aa2.54□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms