RNA–Protein interactions for RNA: ENST00000535236.5

SFSWAP-203, Transcript of splicing factor SWAP, humanhuman

TSL 1 (best)

Gene SFSWAP, Length 5,593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-203ENST00000535236 TNFSF11O14788 317 aa16.56■□□□□ 0.24
SFSWAP-203ENST00000535236 LAIR1Q6GTX8 287 aa16.56■□□□□ 0.24
SFSWAP-203ENST00000535236 NLRC3Q7RTR2 1065 aa16.56■□□□□ 0.24
SFSWAP-203ENST00000535236 OR51S1Q8NGJ8 323 aa16.56■□□□□ 0.24
SFSWAP-203ENST00000535236 OR13F1Q8NGS4 319 aa16.56■□□□□ 0.24
SFSWAP-203ENST00000535236 TEX37Q96LM6 180 aa16.56■□□□□ 0.24
SFSWAP-203ENST00000535236 FN3KRPQ9HA64 309 aa16.56■□□□□ 0.24
SFSWAP-203ENST00000535236 GALR2O43603 387 aaPredicted RBP16.55■□□□□ 0.24
SFSWAP-203ENST00000535236 NRASP01111 189 aa16.55■□□□□ 0.24
SFSWAP-203ENST00000535236 METTL15P1P0C7V9 234 aa16.55■□□□□ 0.24
SFSWAP-203ENST00000535236 HIST1H1CP16403 213 aaKnown RBP16.55■□□□□ 0.24
SFSWAP-203ENST00000535236 FCN2Q15485 313 aa16.55■□□□□ 0.24
SFSWAP-203ENST00000535236 LSRQ86X29 649 aaPredicted RBP16.55■□□□□ 0.24
SFSWAP-203ENST00000535236 ARIH2OSQ8N7S6 290 aa16.55■□□□□ 0.24
SFSWAP-203ENST00000535236 PXT1Q8NFP0 134 aa16.55■□□□□ 0.24
SFSWAP-203ENST00000535236 OR2G3Q8NGZ4 309 aa16.55■□□□□ 0.24
SFSWAP-203ENST00000535236 YIPF5Q969M3 257 aa16.55■□□□□ 0.24
SFSWAP-203ENST00000535236 C11orf54Q9H0W9 315 aaPredicted RBP16.55■□□□□ 0.24
SFSWAP-203ENST00000535236 NPAP1Q9NZP6 1156 aa16.55■□□□□ 0.24
SFSWAP-203ENST00000535236 SLC22A20A6NK97 555 aa16.55■□□□□ 0.24
SFSWAP-203ENST00000535236 ZNF195O14628 629 aa16.55■□□□□ 0.24
SFSWAP-203ENST00000535236 SPI1P17947 270 aa16.55■□□□□ 0.24
SFSWAP-203ENST00000535236 NANOGP1Q8N7R0 232 aa16.55■□□□□ 0.24
SFSWAP-203ENST00000535236 RDH5Q92781 318 aa16.55■□□□□ 0.24
SFSWAP-203ENST00000535236 LYSMD1Q96S90 227 aa16.55■□□□□ 0.24
SFSWAP-203ENST00000535236 NWD2Q9ULI1 1742 aa16.55■□□□□ 0.24
SFSWAP-203ENST00000535236 ZC3H12DA2A288 527 aaKnown RBP16.55■□□□□ 0.24
SFSWAP-203ENST00000535236 ZGLP1P0C6A0 271 aa16.55■□□□□ 0.24
SFSWAP-203ENST00000535236 ZNF718Q3SXZ3 478 aa16.55■□□□□ 0.24
SFSWAP-203ENST00000535236 XKR7Q5GH72 579 aa16.55■□□□□ 0.24
SFSWAP-203ENST00000535236 SLC51BQ86UW2 128 aa16.55■□□□□ 0.24
SFSWAP-203ENST00000535236 FUNDC1Q8IVP5 155 aa16.55■□□□□ 0.24
SFSWAP-203ENST00000535236 SDK1Q7Z5N4 2213 aa16.55■□□□□ 0.24
SFSWAP-203ENST00000535236 TCRBV5S1A1TA0A578 114 aa16.55■□□□□ 0.24
SFSWAP-203ENST00000535236 TMPRSS11DO60235 418 aa16.55■□□□□ 0.24
SFSWAP-203ENST00000535236 NOVA1P51513 510 aaKnown RBP16.55■□□□□ 0.24
SFSWAP-203ENST00000535236 ZDHHC16Q969W1 377 aa16.55■□□□□ 0.24
SFSWAP-203ENST00000535236 MRPS24Q96EL2 167 aaKnown RBP16.55■□□□□ 0.24
SFSWAP-203ENST00000535236 SEC22CQ9BRL7 303 aa16.55■□□□□ 0.24
SFSWAP-203ENST00000535236 VIRMAQ69YN4 1812 aaKnown RBP16.54■□□□□ 0.24
SFSWAP-203ENST00000535236 ARPC3O15145 178 aa16.54■□□□□ 0.24
SFSWAP-203ENST00000535236 BTN1A1Q13410 526 aa16.54■□□□□ 0.24
SFSWAP-203ENST00000535236 SYT14P1Q58G82 188 aa16.54■□□□□ 0.24
SFSWAP-203ENST00000535236 PRSS45Q7RTY3 260 aa16.54■□□□□ 0.24
SFSWAP-203ENST00000535236 REEP6Q96HR9 211 aa16.54■□□□□ 0.24
SFSWAP-203ENST00000535236 C2CD4DB7Z1M9 353 aa16.54■□□□□ 0.24
SFSWAP-203ENST00000535236 ST8SIA3O43173 380 aa16.54■□□□□ 0.24
SFSWAP-203ENST00000535236 PCSK6P29122 969 aa16.54■□□□□ 0.24
SFSWAP-203ENST00000535236 RPS16P62249 146 aaKnown RBP16.54■□□□□ 0.24
SFSWAP-203ENST00000535236 C16orf52Q8NHV5 167 aa16.54■□□□□ 0.24
SFSWAP-203ENST00000535236 SFT2D1Q8WV19 159 aa16.54■□□□□ 0.24
SFSWAP-203ENST00000535236 LRFN5Q96NI6 719 aa16.54■□□□□ 0.24
SFSWAP-203ENST00000535236 ZNF2Q9BSG1 426 aaPredicted RBP16.54■□□□□ 0.24
SFSWAP-203ENST00000535236 RNF32Q9H0A6 362 aa16.54■□□□□ 0.24
SFSWAP-203ENST00000535236 KDM3BQ7LBC6 1761 aa16.54■□□□□ 0.24
SFSWAP-203ENST00000535236 UBR2Q8IWV8 1755 aa16.54■□□□□ 0.24
SFSWAP-203ENST00000535236 IGHV3-15A0A0B4J1V0 119 aa16.54■□□□□ 0.24
SFSWAP-203ENST00000535236 ALOX5APP20292 161 aa16.54■□□□□ 0.24
SFSWAP-203ENST00000535236 RFC3P40938 356 aa16.54■□□□□ 0.24
SFSWAP-203ENST00000535236 CCDC71Q8IV32 467 aaPredicted RBP16.54■□□□□ 0.24
SFSWAP-203ENST00000535236 TMEM99Q8N816 258 aa16.54■□□□□ 0.24
SFSWAP-203ENST00000535236 SLC38A9Q8NBW4 561 aa16.54■□□□□ 0.24
SFSWAP-203ENST00000535236 ISL2Q96A47 359 aa16.54■□□□□ 0.24
SFSWAP-203ENST00000535236 MRGPRX4Q96LA9 322 aa16.54■□□□□ 0.24
SFSWAP-203ENST00000535236 S100A11P31949 105 aa16.54■□□□□ 0.24
SFSWAP-203ENST00000535236 HCCSP53701 268 aa16.54■□□□□ 0.24
SFSWAP-203ENST00000535236 INSM1Q01101 510 aaPredicted RBP16.54■□□□□ 0.24
SFSWAP-203ENST00000535236 ZNF85Q03923 595 aa16.54■□□□□ 0.24
SFSWAP-203ENST00000535236 OR13C8Q8NGS7 320 aa16.54■□□□□ 0.24
SFSWAP-203ENST00000535236 RAF1P04049 648 aa16.54■□□□□ 0.24
SFSWAP-203ENST00000535236 TAGLN2P37802 199 aaKnown RBP16.54■□□□□ 0.24
SFSWAP-203ENST00000535236 UBE2IP63279 158 aaKnown RBP16.54■□□□□ 0.24
SFSWAP-203ENST00000535236 RPL18Q07020 188 aaKnown RBP16.54■□□□□ 0.24
SFSWAP-203ENST00000535236 OR2B11Q5JQS5 317 aa16.54■□□□□ 0.24
SFSWAP-203ENST00000535236 GFRALQ6UXV0 394 aa16.54■□□□□ 0.24
SFSWAP-203ENST00000535236 SLC23A1Q9UHI7 598 aa16.54■□□□□ 0.24
SFSWAP-203ENST00000535236 JAM3Q9BX67 310 aa16.53■□□□□ 0.24
SFSWAP-203ENST00000535236 CMC2Q9NRP2 79 aa16.53■□□□□ 0.24
SFSWAP-203ENST00000535236 COL16A1Q07092 1604 aaPredicted RBP16.53■□□□□ 0.24
SFSWAP-203ENST00000535236 A0A087WZY1 265 aa16.53■□□□□ 0.24
SFSWAP-203ENST00000535236 TMEM129A0AVI4 362 aa16.53■□□□□ 0.24
SFSWAP-203ENST00000535236 ANKRD61A6NGH8 418 aa16.53■□□□□ 0.24
SFSWAP-203ENST00000535236 WDR1O75083 606 aa16.53■□□□□ 0.24
SFSWAP-203ENST00000535236 ZNF628Q5EBL2 1059 aa16.53■□□□□ 0.24
SFSWAP-203ENST00000535236 SCPEP1Q9HB40 452 aa16.53■□□□□ 0.24
SFSWAP-203ENST00000535236 GPR84Q9NQS5 396 aa16.53■□□□□ 0.24
SFSWAP-203ENST00000535236 ZNF331Q9NQX6 463 aaPredicted RBP16.53■□□□□ 0.24
SFSWAP-203ENST00000535236 ZNF816-ZNF321PA0A0X1KG74 233 aa16.53■□□□□ 0.24
SFSWAP-203ENST00000535236 M0QZ24 198 aa16.53■□□□□ 0.24
SFSWAP-203ENST00000535236 ACOT8O14734 319 aa16.53■□□□□ 0.24
SFSWAP-203ENST00000535236 SIX6O95475 246 aa16.53■□□□□ 0.24
SFSWAP-203ENST00000535236 PIGAP37287 484 aa16.53■□□□□ 0.24
SFSWAP-203ENST00000535236 GFERP55789 205 aa16.53■□□□□ 0.24
SFSWAP-203ENST00000535236 ZNF321PQ8N8H1 164 aa16.53■□□□□ 0.24
SFSWAP-203ENST00000535236 WBP2Q969T9 261 aa16.53■□□□□ 0.24
SFSWAP-203ENST00000535236 SH2D7A6NKC9 451 aaPredicted RBP16.53■□□□□ 0.24
SFSWAP-203ENST00000535236 KRBOX1C9JBD0 128 aa16.53■□□□□ 0.24
SFSWAP-203ENST00000535236 BHLHE40O14503 412 aa16.53■□□□□ 0.24
SFSWAP-203ENST00000535236 POU3F3P20264 500 aaPredicted RBP16.53■□□□□ 0.24
SFSWAP-203ENST00000535236 PNLIPRP2P54317 469 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms