RNA–Protein interactions for RNA: ENST00000534625.1

ATM-224, Transcript of ATM serine/threonine kinase, humanhuman

TSL 5

Gene ATM, Length 725 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-224ENST00000534625 MEPEQ9NQ76 525 aaPredicted RBP4.41□□□□□ -1.7
ATM-224ENST00000534625 TMEM38BQ9NVV0 291 aa4.41□□□□□ -1.7
ATM-224ENST00000534625 LEF1Q9UJU2 399 aaPredicted RBP4.41□□□□□ -1.7
ATM-224ENST00000534625 SLC7A7Q9UM01 511 aa4.41□□□□□ -1.7
ATM-224ENST00000534625 FZR1Q9UM11 496 aa4.41□□□□□ -1.7
ATM-224ENST00000534625 NDUFAF1Q9Y375 327 aa4.41□□□□□ -1.7
ATM-224ENST00000534625 DYSFO75923 2080 aa4.41□□□□□ -1.7
ATM-224ENST00000534625 TRAPPC13A5PLN9 417 aa4.4□□□□□ -1.71
ATM-224ENST00000534625 M0R233 179 aa4.4□□□□□ -1.71
ATM-224ENST00000534625 KPNA4O00629 521 aaPredicted RBP4.4□□□□□ -1.71
ATM-224ENST00000534625 FBP2O00757 339 aa4.4□□□□□ -1.71
ATM-224ENST00000534625 ANGPT2O15123 496 aa4.4□□□□□ -1.71
ATM-224ENST00000534625 DHHO43323 396 aa4.4□□□□□ -1.71
ATM-224ENST00000534625 RNF13O43567 381 aa4.4□□□□□ -1.71
ATM-224ENST00000534625 RP2O75695 350 aa4.4□□□□□ -1.71
ATM-224ENST00000534625 UBL3O95164 117 aa4.4□□□□□ -1.71
ATM-224ENST00000534625 OR6A2O95222 327 aa4.4□□□□□ -1.71
ATM-224ENST00000534625 RAB36O95755 333 aa4.4□□□□□ -1.71
ATM-224ENST00000534625 CLPTM1O96005 669 aa4.4□□□□□ -1.71
ATM-224ENST00000534625 QDPRP09417 244 aa4.4□□□□□ -1.71
ATM-224ENST00000534625 PGA4P0DJD7 388 aa4.4□□□□□ -1.71
ATM-224ENST00000534625 PGA3P0DJD8 388 aa4.4□□□□□ -1.71
ATM-224ENST00000534625 ZNF250P15622 560 aa4.4□□□□□ -1.71
ATM-224ENST00000534625 HNF1AP20823 631 aa4.4□□□□□ -1.71
ATM-224ENST00000534625 PCGF2P35227 344 aa4.4□□□□□ -1.71
ATM-224ENST00000534625 DVL1P1P54792 670 aaPredicted RBP4.4□□□□□ -1.71
ATM-224ENST00000534625 RPS23P62266 143 aaKnown RBP4.4□□□□□ -1.71
ATM-224ENST00000534625 RUNX1T1Q06455 604 aa4.4□□□□□ -1.71
ATM-224ENST00000534625 KLF9Q13886 244 aaPredicted RBP4.4□□□□□ -1.71
ATM-224ENST00000534625 CCNIQ14094 377 aa4.4□□□□□ -1.71
ATM-224ENST00000534625 MELKQ14680 651 aa4.4□□□□□ -1.71
ATM-224ENST00000534625 HIST3H3Q16695 136 aa4.4□□□□□ -1.71
ATM-224ENST00000534625 CEP78Q5JTW2 689 aa4.4□□□□□ -1.71
ATM-224ENST00000534625 GKAP1Q5VSY0 366 aaPredicted RBP4.4□□□□□ -1.71
ATM-224ENST00000534625 SFRP4Q6FHJ7 346 aaPredicted RBP4.4□□□□□ -1.71
ATM-224ENST00000534625 TTC33Q6PID6 262 aaPredicted RBP4.4□□□□□ -1.71
ATM-224ENST00000534625 CCDC80Q76M96 950 aa4.4□□□□□ -1.71
ATM-224ENST00000534625 PATL1Q86TB9 770 aaKnown RBP4.4□□□□□ -1.71
ATM-224ENST00000534625 CALHM3Q86XJ0 350 aa4.4□□□□□ -1.71
ATM-224ENST00000534625 SLC30A7Q8NEW0 376 aa4.4□□□□□ -1.71
ATM-224ENST00000534625 OR10A6Q8NH74 314 aa4.4□□□□□ -1.71
ATM-224ENST00000534625 VANGL1Q8TAA9 524 aaPredicted RBP4.4□□□□□ -1.71
ATM-224ENST00000534625 RDH5Q92781 318 aa4.4□□□□□ -1.71
ATM-224ENST00000534625 ZNF566Q969W8 418 aa4.4□□□□□ -1.71
ATM-224ENST00000534625 SLC25A44Q96H78 314 aaPredicted RBP4.4□□□□□ -1.71
ATM-224ENST00000534625 MPP4Q96JB8 637 aa4.4□□□□□ -1.71
ATM-224ENST00000534625 MAGEB18Q96M61 343 aa4.4□□□□□ -1.71
ATM-224ENST00000534625 SEPHS2Q99611 448 aa4.4□□□□□ -1.71
ATM-224ENST00000534625 SH3GL3Q99963 347 aa4.4□□□□□ -1.71
ATM-224ENST00000534625 QTRT1Q9BXR0 403 aaKnown RBP4.4□□□□□ -1.71
ATM-224ENST00000534625 MRPL13Q9BYD1 178 aaKnown RBP4.4□□□□□ -1.71
ATM-224ENST00000534625 SLC19A3Q9BZV2 496 aa4.4□□□□□ -1.71
ATM-224ENST00000534625 NANSQ9NR45 359 aa4.4□□□□□ -1.71
ATM-224ENST00000534625 INTS9Q9NV88 658 aaKnown RBP4.4□□□□□ -1.71
ATM-224ENST00000534625 ZNF229Q9UJW7 825 aa4.4□□□□□ -1.71
ATM-224ENST00000534625 FBXL3Q9UKT7 428 aa4.4□□□□□ -1.71
ATM-224ENST00000534625 IGLV3-9A0A075B6K5 115 aa4.39□□□□□ -1.71
ATM-224ENST00000534625 IGKV1D-43A0A0B4J1Z2 117 aa4.39□□□□□ -1.71
ATM-224ENST00000534625 B4DSR2 109 aa4.39□□□□□ -1.71
ATM-224ENST00000534625 FAM157AC9JC47 383 aa4.39□□□□□ -1.71
ATM-224ENST00000534625 BLOC1S5-TXNDC5H3BN57 136 aa4.39□□□□□ -1.71
ATM-224ENST00000534625 H3BUI4 141 aa4.39□□□□□ -1.71
ATM-224ENST00000534625 FXYD1O00168 92 aa4.39□□□□□ -1.71
ATM-224ENST00000534625 EDF1O60869 148 aaKnown RBP4.39□□□□□ -1.71
ATM-224ENST00000534625 ENTPD5O75356 428 aa4.39□□□□□ -1.71
ATM-224ENST00000534625 TRMUO75648 421 aaKnown RBP4.39□□□□□ -1.71
ATM-224ENST00000534625 BCL10O95999 233 aa4.39□□□□□ -1.71
ATM-224ENST00000534625 IGF2P01344 180 aa4.39□□□□□ -1.71
ATM-224ENST00000534625 IGHG1P01857 330 aa4.39□□□□□ -1.71
ATM-224ENST00000534625 MT-ND1P03886 318 aa4.39□□□□□ -1.71
ATM-224ENST00000534625 HIST1H2ABP04908 130 aa4.39□□□□□ -1.71
ATM-224ENST00000534625 MMP7P09237 267 aaPredicted RBP4.39□□□□□ -1.71
ATM-224ENST00000534625 TSPAN19P0C672 248 aa4.39□□□□□ -1.71
ATM-224ENST00000534625 SAGP10523 405 aaPredicted RBP4.39□□□□□ -1.71
ATM-224ENST00000534625 CCL2P13500 99 aa4.39□□□□□ -1.71
ATM-224ENST00000534625 FUT1P19526 365 aa4.39□□□□□ -1.71
ATM-224ENST00000534625 TNFRSF1BP20333 461 aa4.39□□□□□ -1.71
ATM-224ENST00000534625 ACHEP22303 614 aa4.39□□□□□ -1.71
ATM-224ENST00000534625 SRP14P37108 136 aaKnown RBP4.39□□□□□ -1.71
ATM-224ENST00000534625 AQP2P41181 271 aa4.39□□□□□ -1.71
ATM-224ENST00000534625 MAGEB1P43366 347 aa4.39□□□□□ -1.71
ATM-224ENST00000534625 GPR6P46095 362 aaPredicted RBP4.39□□□□□ -1.71
ATM-224ENST00000534625 ZNF133P52736 654 aaPredicted RBP4.39□□□□□ -1.71
ATM-224ENST00000534625 UGT2B15P54855 530 aa4.39□□□□□ -1.71
ATM-224ENST00000534625 TMEM33P57088 247 aa4.39□□□□□ -1.71
ATM-224ENST00000534625 LOXL3P58215 753 aa4.39□□□□□ -1.71
ATM-224ENST00000534625 ERVS71-1P61550 626 aa4.39□□□□□ -1.71
ATM-224ENST00000534625 LMO4P61968 165 aa4.39□□□□□ -1.71
ATM-224ENST00000534625 MRPS11P82912 194 aaKnown RBP4.39□□□□□ -1.71
ATM-224ENST00000534625 MYBPC1Q00872 1141 aa4.39□□□□□ -1.71
ATM-224ENST00000534625 GALK2Q01415 458 aa4.39□□□□□ -1.71
ATM-224ENST00000534625 RPL18Q07020 188 aaKnown RBP4.39□□□□□ -1.71
ATM-224ENST00000534625 ALKBH6Q3KRA9 238 aa4.39□□□□□ -1.71
ATM-224ENST00000534625 INTS11Q5TA45 600 aaKnown RBP4.39□□□□□ -1.71
ATM-224ENST00000534625 LIPNQ5VXI9 398 aa4.39□□□□□ -1.71
ATM-224ENST00000534625 RGS7BPQ6MZT1 257 aaPredicted RBP4.39□□□□□ -1.71
ATM-224ENST00000534625 NANOGP8Q6NSW7 305 aa4.39□□□□□ -1.71
ATM-224ENST00000534625 UGT2A3Q6UWM9 527 aa4.39□□□□□ -1.71
ATM-224ENST00000534625 HIST3H2AQ7L7L0 130 aa4.39□□□□□ -1.71
ATM-224ENST00000534625 SLC16A14Q7RTX9 510 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms