RNA–Protein interactions for RNA: ENST00000534356.1

CASP4-213, Transcript of caspase 4, humanhuman

TSL 1 (best)

Gene CASP4, Length 771 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-213ENST00000534356 PPP1CAP62136 330 aa4.22□□□□□ -1.73
CASP4-213ENST00000534356 YWHAEP62258 255 aaKnown RBP4.22□□□□□ -1.73
CASP4-213ENST00000534356 ENPEPQ07075 957 aa4.22□□□□□ -1.73
CASP4-213ENST00000534356 IHHQ14623 411 aa4.22□□□□□ -1.73
CASP4-213ENST00000534356 PYHIN1Q6K0P9 492 aa4.22□□□□□ -1.73
CASP4-213ENST00000534356 CCDC137Q6PK04 289 aaKnown RBP4.22□□□□□ -1.73
CASP4-213ENST00000534356 VRK2Q86Y07 508 aa4.22□□□□□ -1.73
CASP4-213ENST00000534356 CLDN19Q8N6F1 224 aa4.22□□□□□ -1.73
CASP4-213ENST00000534356 TEX9Q8N6V9 391 aa4.22□□□□□ -1.73
CASP4-213ENST00000534356 OR4D9Q8NGE8 314 aa4.22□□□□□ -1.73
CASP4-213ENST00000534356 CT55Q8WUE5 264 aa4.22□□□□□ -1.73
CASP4-213ENST00000534356 RAB7BQ96AH8 199 aa4.22□□□□□ -1.73
CASP4-213ENST00000534356 TMEM159Q96B96 161 aa4.22□□□□□ -1.73
CASP4-213ENST00000534356 PGLYRP4Q96LB8 373 aa4.22□□□□□ -1.73
CASP4-213ENST00000534356 DDA1Q9BW61 102 aa4.22□□□□□ -1.73
CASP4-213ENST00000534356 ZYG11BQ9C0D3 744 aa4.22□□□□□ -1.73
CASP4-213ENST00000534356 NARFLQ9H6Q4 476 aa4.22□□□□□ -1.73
CASP4-213ENST00000534356 SH2D2AQ9NP31 389 aa4.22□□□□□ -1.73
CASP4-213ENST00000534356 PALMDQ9NP74 551 aa4.22□□□□□ -1.73
CASP4-213ENST00000534356 ASF1BQ9NVP2 202 aa4.22□□□□□ -1.73
CASP4-213ENST00000534356 GPATCH2LQ9NWQ4 482 aa4.22□□□□□ -1.73
CASP4-213ENST00000534356 CD84Q9UIB8 345 aa4.22□□□□□ -1.73
CASP4-213ENST00000534356 UGT2A1Q9Y4X1 527 aa4.22□□□□□ -1.73
CASP4-213ENST00000534356 AKAP6Q13023 2319 aa4.22□□□□□ -1.73
CASP4-213ENST00000534356 ANKRD12Q6UB98 2062 aa4.22□□□□□ -1.73
CASP4-213ENST00000534356 ABCA2Q9BZC7 2435 aa4.21□□□□□ -1.74
CASP4-213ENST00000534356 A0A0G2JRQ6 117 aa4.21□□□□□ -1.74
CASP4-213ENST00000534356 A0A1W2PNV4 684 aa4.21□□□□□ -1.74
CASP4-213ENST00000534356 PINLYPA6NC86 204 aa4.21□□□□□ -1.74
CASP4-213ENST00000534356 BCAS1O75363 584 aaPredicted RBP4.21□□□□□ -1.74
CASP4-213ENST00000534356 KIAA0754O94854 1291 aa4.21□□□□□ -1.74
CASP4-213ENST00000534356 SOD1P00441 154 aa4.21□□□□□ -1.74
CASP4-213ENST00000534356 HEXBP07686 556 aa4.21□□□□□ -1.74
CASP4-213ENST00000534356 PLEKP08567 350 aaPredicted RBP4.21□□□□□ -1.74
CASP4-213ENST00000534356 ACTR1BP42025 376 aa4.21□□□□□ -1.74
CASP4-213ENST00000534356 ACAA2P42765 397 aaKnown RBP4.21□□□□□ -1.74
CASP4-213ENST00000534356 ACTR1AP61163 376 aa4.21□□□□□ -1.74
CASP4-213ENST00000534356 SYPL1Q16563 259 aa4.21□□□□□ -1.74
CASP4-213ENST00000534356 SLC25A52Q3SY17 297 aa4.21□□□□□ -1.74
CASP4-213ENST00000534356 LRRC31Q6UY01 552 aa4.21□□□□□ -1.74
CASP4-213ENST00000534356 FDCSPQ8NFU4 85 aa4.21□□□□□ -1.74
CASP4-213ENST00000534356 STXBP6Q8NFX7 210 aa4.21□□□□□ -1.74
CASP4-213ENST00000534356 OR6C4Q8NGE1 309 aa4.21□□□□□ -1.74
CASP4-213ENST00000534356 OR10A7Q8NGE5 316 aa4.21□□□□□ -1.74
CASP4-213ENST00000534356 OR56B4Q8NH76 319 aa4.21□□□□□ -1.74
CASP4-213ENST00000534356 SLC37A2Q8TED4 501 aa4.21□□□□□ -1.74
CASP4-213ENST00000534356 RXFP2Q8WXD0 754 aa4.21□□□□□ -1.74
CASP4-213ENST00000534356 ISG20Q96AZ6 181 aaKnown RBP4.21□□□□□ -1.74
CASP4-213ENST00000534356 TMEM101Q96IK0 257 aa4.21□□□□□ -1.74
CASP4-213ENST00000534356 CATSPER2Q96P56 530 aa4.21□□□□□ -1.74
CASP4-213ENST00000534356 NRTNQ99748 197 aa4.21□□□□□ -1.74
CASP4-213ENST00000534356 TPPP3Q9BW30 176 aa4.21□□□□□ -1.74
CASP4-213ENST00000534356 NUDT9Q9BW91 350 aa4.21□□□□□ -1.74
CASP4-213ENST00000534356 NANOGQ9H9S0 305 aa4.21□□□□□ -1.74
CASP4-213ENST00000534356 ELOVL3Q9HB03 270 aa4.21□□□□□ -1.74
CASP4-213ENST00000534356 OR12D3Q9UGF7 316 aa4.21□□□□□ -1.74
CASP4-213ENST00000534356 OR10H1Q9Y4A9 318 aa4.21□□□□□ -1.74
CASP4-213ENST00000534356 MAP1AP78559 2803 aaPredicted RBP4.21□□□□□ -1.74
CASP4-213ENST00000534356 ZNF469Q96JG9 3925 aaPredicted RBP4.2□□□□□ -1.74
CASP4-213ENST00000534356 NIPBLQ6KC79 2804 aaeCLIP4.2□□□□□ -1.74
CASP4-213ENST00000534356 ANKHD1Q8IWZ3 2542 aaKnown RBP4.2□□□□□ -1.74
CASP4-213ENST00000534356 TSPAN11A1L157 253 aa4.2□□□□□ -1.74
CASP4-213ENST00000534356 A8MUI8 341 aa4.2□□□□□ -1.74
CASP4-213ENST00000534356 E7ESA3 106 aa4.2□□□□□ -1.74
CASP4-213ENST00000534356 NPIPA7E9PJI5 369 aa4.2□□□□□ -1.74
CASP4-213ENST00000534356 MKRN2OSH3BPM6 223 aa4.2□□□□□ -1.74
CASP4-213ENST00000534356 POLR1CO15160 346 aaPredicted RBP4.2□□□□□ -1.74
CASP4-213ENST00000534356 RS1O15537 224 aa4.2□□□□□ -1.74
CASP4-213ENST00000534356 GUCA1CO95843 209 aa4.2□□□□□ -1.74
CASP4-213ENST00000534356 NPIPA8P0DM63 369 aa4.2□□□□□ -1.74
CASP4-213ENST00000534356 NR2C1P13056 603 aa4.2□□□□□ -1.74
CASP4-213ENST00000534356 UQCRC2P22695 453 aa4.2□□□□□ -1.74
CASP4-213ENST00000534356 LEPP41159 167 aa4.2□□□□□ -1.74
CASP4-213ENST00000534356 BIDP55957 195 aa4.2□□□□□ -1.74
CASP4-213ENST00000534356 CSNK1G2P78368 415 aa4.2□□□□□ -1.74
CASP4-213ENST00000534356 DAZ2Q13117 558 aaKnown RBP4.2□□□□□ -1.74
CASP4-213ENST00000534356 SELPLGQ14242 412 aa4.2□□□□□ -1.74
CASP4-213ENST00000534356 TATDN3Q17R31 274 aa4.2□□□□□ -1.74
CASP4-213ENST00000534356 PYCR3Q53H96 274 aa4.2□□□□□ -1.74
CASP4-213ENST00000534356 BRMS1LQ5PSV4 323 aa4.2□□□□□ -1.74
CASP4-213ENST00000534356 CHCHD2P9Q5T1J5 151 aaPredicted RBP4.2□□□□□ -1.74
CASP4-213ENST00000534356 KCNIP4Q6PIL6 250 aa4.2□□□□□ -1.74
CASP4-213ENST00000534356 ACOT7LQ6ZUV0 252 aa4.2□□□□□ -1.74
CASP4-213ENST00000534356 LINC01555Q8NAE3 123 aa4.2□□□□□ -1.74
CASP4-213ENST00000534356 ZNF740Q8NDX6 193 aa4.2□□□□□ -1.74
CASP4-213ENST00000534356 TCTEX1D2Q8WW35 142 aa4.2□□□□□ -1.74
CASP4-213ENST00000534356 NELFBQ8WX92 580 aa4.2□□□□□ -1.74
CASP4-213ENST00000534356 KIAA1143Q96AT1 154 aaPredicted RBP4.2□□□□□ -1.74
CASP4-213ENST00000534356 DTNBP1Q96EV8 351 aa4.2□□□□□ -1.74
CASP4-213ENST00000534356 ZNF799Q96GE5 643 aa4.2□□□□□ -1.74
CASP4-213ENST00000534356 TGM7Q96PF1 710 aa4.2□□□□□ -1.74
CASP4-213ENST00000534356 TSGA13Q96PP4 275 aa4.2□□□□□ -1.74
CASP4-213ENST00000534356 GAL3ST1Q99999 423 aa4.2□□□□□ -1.74
CASP4-213ENST00000534356 SPATA16Q9BXB7 569 aa4.2□□□□□ -1.74
CASP4-213ENST00000534356 ULBP3Q9BZM4 244 aa4.2□□□□□ -1.74
CASP4-213ENST00000534356 DAZ3Q9NR90 486 aaKnown RBP4.2□□□□□ -1.74
CASP4-213ENST00000534356 FBXO8Q9NRD0 319 aa4.2□□□□□ -1.74
CASP4-213ENST00000534356 FARSBQ9NSD9 589 aaKnown RBP4.2□□□□□ -1.74
CASP4-213ENST00000534356 DNAJC12Q9UKB3 198 aa4.2□□□□□ -1.74
CASP4-213ENST00000534356 BLOC1S6Q9UL45 172 aa4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms