RNA–Protein interactions for RNA: ENST00000534172.1

CSMD3-210, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 5

Gene CSMD3, Length 2,486 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-210ENST00000534172 SURF4O15260 269 aa2.99□□□□□ -1.93
CSMD3-210ENST00000534172 COCHO43405 550 aa2.99□□□□□ -1.93
CSMD3-210ENST00000534172 PLIN3O60664 434 aa2.99□□□□□ -1.93
CSMD3-210ENST00000534172 UGT2B17O75795 530 aa2.99□□□□□ -1.93
CSMD3-210ENST00000534172 UPK1BO75841 260 aa2.99□□□□□ -1.93
CSMD3-210ENST00000534172 SCGNO76038 276 aa2.99□□□□□ -1.93
CSMD3-210ENST00000534172 AP2A2O94973 939 aa2.99□□□□□ -1.93
CSMD3-210ENST00000534172 FGGP02679 453 aa2.99□□□□□ -1.93
CSMD3-210ENST00000534172 ZNF250P15622 560 aa2.99□□□□□ -1.93
CSMD3-210ENST00000534172 ATP5A1P25705 553 aaKnown RBP2.99□□□□□ -1.93
CSMD3-210ENST00000534172 PSMB6P28072 239 aa2.99□□□□□ -1.93
CSMD3-210ENST00000534172 CD80P33681 288 aa2.99□□□□□ -1.93
CSMD3-210ENST00000534172 SOX3P41225 446 aa2.99□□□□□ -1.93
CSMD3-210ENST00000534172 MAP3K8P41279 467 aa2.99□□□□□ -1.93
CSMD3-210ENST00000534172 SLC1A2P43004 574 aa2.99□□□□□ -1.93
CSMD3-210ENST00000534172 UGT2B15P54855 530 aa2.99□□□□□ -1.93
CSMD3-210ENST00000534172 ACTBP60709 375 aa2.99□□□□□ -1.93
CSMD3-210ENST00000534172 ACTA2P62736 377 aa2.99□□□□□ -1.93
CSMD3-210ENST00000534172 ACTG1P63261 375 aa2.99□□□□□ -1.93
CSMD3-210ENST00000534172 ACTG2P63267 376 aa2.99□□□□□ -1.93
CSMD3-210ENST00000534172 ACTC1P68032 377 aa2.99□□□□□ -1.93
CSMD3-210ENST00000534172 ACTA1P68133 377 aa2.99□□□□□ -1.93
CSMD3-210ENST00000534172 MRPS22P82650 360 aaKnown RBP2.99□□□□□ -1.93
CSMD3-210ENST00000534172 CDKL1Q00532 357 aa2.99□□□□□ -1.93
CSMD3-210ENST00000534172 SEMG2Q02383 582 aa2.99□□□□□ -1.93
CSMD3-210ENST00000534172 RCAN2Q14206 197 aa2.99□□□□□ -1.93
CSMD3-210ENST00000534172 CDKN3Q16667 212 aa2.99□□□□□ -1.93
CSMD3-210ENST00000534172 MICAQ29983 383 aa2.99□□□□□ -1.93
CSMD3-210ENST00000534172 TMEM30BQ3MIR4 351 aa2.99□□□□□ -1.93
CSMD3-210ENST00000534172 EOGTQ5NDL2 527 aa2.99□□□□□ -1.93
CSMD3-210ENST00000534172 MEDAGQ5VYS4 303 aa2.99□□□□□ -1.93
CSMD3-210ENST00000534172 CGB2Q6NT52 195 aa2.99□□□□□ -1.93
CSMD3-210ENST00000534172 ZNF730Q6ZMV8 503 aa2.99□□□□□ -1.93
CSMD3-210ENST00000534172 NDUFAF7Q7L592 441 aa2.99□□□□□ -1.93
CSMD3-210ENST00000534172 SERPINA9Q86WD7 417 aa2.99□□□□□ -1.93
CSMD3-210ENST00000534172 C12orf45Q8N5I9 185 aaPredicted RBP2.99□□□□□ -1.93
CSMD3-210ENST00000534172 ACBD4Q8NC06 268 aa2.99□□□□□ -1.93
CSMD3-210ENST00000534172 NFAM1Q8NET5 270 aaPredicted RBP2.99□□□□□ -1.93
CSMD3-210ENST00000534172 SDR9C7Q8NEX9 313 aa2.99□□□□□ -1.93
CSMD3-210ENST00000534172 OR4C5Q8NGB2 326 aa2.99□□□□□ -1.93
CSMD3-210ENST00000534172 OR2D3Q8NGH3 330 aa2.99□□□□□ -1.93
CSMD3-210ENST00000534172 OR2T11Q8NH01 316 aa2.99□□□□□ -1.93
CSMD3-210ENST00000534172 CERS2Q96G23 380 aa2.99□□□□□ -1.93
CSMD3-210ENST00000534172 NARS2Q96I59 477 aaKnown RBP2.99□□□□□ -1.93
CSMD3-210ENST00000534172 WFIKKN1Q96NZ8 548 aa2.99□□□□□ -1.93
CSMD3-210ENST00000534172 LGMNQ99538 433 aa2.99□□□□□ -1.93
CSMD3-210ENST00000534172 APOL4Q9BPW4 351 aa2.99□□□□□ -1.93
CSMD3-210ENST00000534172 OSBPL11Q9BXB4 747 aa2.99□□□□□ -1.93
CSMD3-210ENST00000534172 MFFQ9GZY8 342 aa2.99□□□□□ -1.93
CSMD3-210ENST00000534172 UPF3AQ9H1J1 476 aaKnown RBP2.99□□□□□ -1.93
CSMD3-210ENST00000534172 MTHFD2LQ9H903 347 aaPredicted RBP2.99□□□□□ -1.93
CSMD3-210ENST00000534172 SIX2Q9NPC8 291 aa2.99□□□□□ -1.93
CSMD3-210ENST00000534172 NANSQ9NR45 359 aa2.99□□□□□ -1.93
CSMD3-210ENST00000534172 STARD5Q9NSY2 213 aa2.99□□□□□ -1.93
CSMD3-210ENST00000534172 KLHL21Q9UJP4 597 aa2.99□□□□□ -1.93
CSMD3-210ENST00000534172 SSR3Q9UNL2 185 aa2.99□□□□□ -1.93
CSMD3-210ENST00000534172 WIPI2Q9Y4P8 454 aa2.99□□□□□ -1.93
CSMD3-210ENST00000534172 SELENOKQ9Y6D0 94 aa2.99□□□□□ -1.93
CSMD3-210ENST00000534172 BDP1A6H8Y1 2624 aa2.99□□□□□ -1.93
CSMD3-210ENST00000534172 SLX4Q8IY92 1834 aa2.99□□□□□ -1.93
CSMD3-210ENST00000534172 A0A1B0GUL6 1792 aa2.99□□□□□ -1.93
CSMD3-210ENST00000534172 MAST2Q6P0Q8 1798 aa2.99□□□□□ -1.93
CSMD3-210ENST00000534172 COL4A6Q14031 1691 aa2.98□□□□□ -1.93
CSMD3-210ENST00000534172 PPIAL4EA0A075B759 164 aa2.98□□□□□ -1.93
CSMD3-210ENST00000534172 PP2D1A8MPX8 630 aa2.98□□□□□ -1.93
CSMD3-210ENST00000534172 H3BTX0 84 aa2.98□□□□□ -1.93
CSMD3-210ENST00000534172 NR5A2O00482 541 aa2.98□□□□□ -1.93
CSMD3-210ENST00000534172 DLGAP1O14490 977 aa2.98□□□□□ -1.93
CSMD3-210ENST00000534172 SCAMP2O15127 329 aaKnown RBP2.98□□□□□ -1.93
CSMD3-210ENST00000534172 FADS1O60427 444 aa2.98□□□□□ -1.93
CSMD3-210ENST00000534172 KCNK2O95069 426 aa2.98□□□□□ -1.93
CSMD3-210ENST00000534172 IFNA7P01567 189 aa2.98□□□□□ -1.93
CSMD3-210ENST00000534172 PPIAL4FP0DN26 164 aa2.98□□□□□ -1.93
CSMD3-210ENST00000534172 MAGEA2P43356 314 aa2.98□□□□□ -1.93
CSMD3-210ENST00000534172 ATP1B3P54709 279 aa2.98□□□□□ -1.93
CSMD3-210ENST00000534172 AP3S2P59780 193 aa2.98□□□□□ -1.93
CSMD3-210ENST00000534172 CXCR4P61073 352 aa2.98□□□□□ -1.93
CSMD3-210ENST00000534172 RPL27P61353 136 aaKnown RBP2.98□□□□□ -1.93
CSMD3-210ENST00000534172 RBX1P62877 108 aa2.98□□□□□ -1.93
CSMD3-210ENST00000534172 SRYQ05066 204 aa2.98□□□□□ -1.93
CSMD3-210ENST00000534172 MADCAM1Q13477 382 aa2.98□□□□□ -1.93
CSMD3-210ENST00000534172 GK3PQ14409 553 aa2.98□□□□□ -1.93
CSMD3-210ENST00000534172 USF2Q15853 346 aaPredicted RBP2.98□□□□□ -1.93
CSMD3-210ENST00000534172 MRPL23Q16540 153 aaKnown RBP2.98□□□□□ -1.93
CSMD3-210ENST00000534172 ACTBL2Q562R1 376 aa2.98□□□□□ -1.93
CSMD3-210ENST00000534172 COQ5Q5HYK3 327 aa2.98□□□□□ -1.93
CSMD3-210ENST00000534172 C6orf52Q5T4I8 152 aa2.98□□□□□ -1.93
CSMD3-210ENST00000534172 C1orf189Q5VU69 101 aa2.98□□□□□ -1.93
CSMD3-210ENST00000534172 MFSD14CQ5VZR4 134 aa2.98□□□□□ -1.93
CSMD3-210ENST00000534172 SLC22A10Q63ZE4 541 aa2.98□□□□□ -1.93
CSMD3-210ENST00000534172 FRMPD2BQ6IN97 320 aa2.98□□□□□ -1.93
CSMD3-210ENST00000534172 ADAM5Q6NVV9 412 aa2.98□□□□□ -1.93
CSMD3-210ENST00000534172 ZNF790Q6PG37 636 aa2.98□□□□□ -1.93
CSMD3-210ENST00000534172 SLC16A13Q7RTY0 426 aa2.98□□□□□ -1.93
CSMD3-210ENST00000534172 FAM58AQ8N1B3 248 aa2.98□□□□□ -1.93
CSMD3-210ENST00000534172 CHDHQ8NE62 594 aaPredicted RBP2.98□□□□□ -1.93
CSMD3-210ENST00000534172 OR4D5Q8NGN0 318 aa2.98□□□□□ -1.93
CSMD3-210ENST00000534172 OR9A2Q8NGT5 310 aa2.98□□□□□ -1.93
CSMD3-210ENST00000534172 SPATA3Q8NHX4 192 aa2.98□□□□□ -1.93
CSMD3-210ENST00000534172 C10orf82Q8WW14 230 aa2.98□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms