RNA–Protein interactions for RNA: ENST00000533979.5

ATM-223, Transcript of ATM serine/threonine kinase, human

TSL 3

Gene ATM, Length 705 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATM-223	ENST00000533979	PIGU	Q9H490	435 aa		3.69	□□□□□ -1.82
ATM-223	ENST00000533979	PARVB	Q9HBI1	364 aa		3.69	□□□□□ -1.82
ATM-223	ENST00000533979	RETN	Q9HD89	108 aa		3.69	□□□□□ -1.82
ATM-223	ENST00000533979	DMAP1	Q9NPF5	467 aa	Predicted RBP	3.69	□□□□□ -1.82
ATM-223	ENST00000533979	SPHK2	Q9NRA0	654 aa		3.69	□□□□□ -1.82
ATM-223	ENST00000533979	EURL	Q9NYK6	297 aa		3.69	□□□□□ -1.82
ATM-223	ENST00000533979	ABCD2	Q9UBJ2	740 aa		3.69	□□□□□ -1.82
ATM-223	ENST00000533979	SPATA2	Q9UM82	520 aa		3.69	□□□□□ -1.82
ATM-223	ENST00000533979	CACNA1S	Q13698	1873 aa		3.69	□□□□□ -1.82
ATM-223	ENST00000533979	LAMB2	P55268	1798 aa		3.68	□□□□□ -1.82
ATM-223	ENST00000533979	PCNX3	Q9H6A9	2034 aa		3.68	□□□□□ -1.82
ATM-223	ENST00000533979	ABCC12	Q96J65	1359 aa		3.68	□□□□□ -1.82
ATM-223	ENST00000533979	TEX48	A0A1B0GUV7	120 aa		3.68	□□□□□ -1.82
ATM-223	ENST00000533979	CENPX	A8MT69	81 aa		3.68	□□□□□ -1.82
ATM-223	ENST00000533979	RFXANK	O14593	260 aa		3.68	□□□□□ -1.82
ATM-223	ENST00000533979	GPAA1	O43292	621 aa		3.68	□□□□□ -1.82
ATM-223	ENST00000533979	ATP8B1	O43520	1251 aa		3.68	□□□□□ -1.82
ATM-223	ENST00000533979	UGT1A9	O60656	530 aa		3.68	□□□□□ -1.82
ATM-223	ENST00000533979	FGF1	P05230	155 aa		3.68	□□□□□ -1.82
ATM-223	ENST00000533979	PNMA6A	P0CW24	399 aa	Predicted RBP	3.68	□□□□□ -1.82
ATM-223	ENST00000533979	MGMT	P16455	207 aa		3.68	□□□□□ -1.82
ATM-223	ENST00000533979	PRKACG	P22612	351 aa		3.68	□□□□□ -1.82
ATM-223	ENST00000533979	ALDH3A1	P30838	453 aa		3.68	□□□□□ -1.82
ATM-223	ENST00000533979	HTR1F	P30939	366 aa		3.68	□□□□□ -1.82
ATM-223	ENST00000533979	CALCR	P30988	508 aa		3.68	□□□□□ -1.82
ATM-223	ENST00000533979	NBL1	P41271	181 aa		3.68	□□□□□ -1.82
ATM-223	ENST00000533979	CRAT	P43155	626 aa		3.68	□□□□□ -1.82
ATM-223	ENST00000533979	GPR1	P46091	355 aa		3.68	□□□□□ -1.82
ATM-223	ENST00000533979	UCN	P55089	124 aa		3.68	□□□□□ -1.82
ATM-223	ENST00000533979	LMO4	P61968	165 aa		3.68	□□□□□ -1.82
ATM-223	ENST00000533979	SRPX	P78539	464 aa		3.68	□□□□□ -1.82
ATM-223	ENST00000533979	FKBP3	Q00688	224 aa	Known RBP	3.68	□□□□□ -1.82
ATM-223	ENST00000533979	ZNF33A	Q06730	810 aa		3.68	□□□□□ -1.82
ATM-223	ENST00000533979	FADD	Q13158	208 aa		3.68	□□□□□ -1.82
ATM-223	ENST00000533979	SERTAD2	Q14140	314 aa		3.68	□□□□□ -1.82
ATM-223	ENST00000533979	KCNJ11	Q14654	390 aa		3.68	□□□□□ -1.82
ATM-223	ENST00000533979	TSC22D1	Q15714	1073 aa		3.68	□□□□□ -1.82
ATM-223	ENST00000533979	RPEL1	Q2QD12	228 aa		3.68	□□□□□ -1.82
ATM-223	ENST00000533979	GPRC6A	Q5T6X5	926 aa		3.68	□□□□□ -1.82
ATM-223	ENST00000533979	ZNF470	Q6ECI4	717 aa		3.68	□□□□□ -1.82
ATM-223	ENST00000533979	SLC35D2	Q76EJ3	337 aa		3.68	□□□□□ -1.82
ATM-223	ENST00000533979	SLC26A11	Q86WA9	606 aa		3.68	□□□□□ -1.82
ATM-223	ENST00000533979	C17orf78	Q8N4C9	275 aa		3.68	□□□□□ -1.82
ATM-223	ENST00000533979	SSC4D	Q8WTU2	575 aa		3.68	□□□□□ -1.82
ATM-223	ENST00000533979	PYROXD1	Q8WU10	500 aa		3.68	□□□□□ -1.82
ATM-223	ENST00000533979	TNFRSF14	Q92956	283 aa		3.68	□□□□□ -1.82
ATM-223	ENST00000533979	NEIL2	Q969S2	332 aa		3.68	□□□□□ -1.82
ATM-223	ENST00000533979	APH1A	Q96BI3	265 aa		3.68	□□□□□ -1.82
ATM-223	ENST00000533979	CCDC124	Q96CT7	223 aa	Known RBP	3.68	□□□□□ -1.82
ATM-223	ENST00000533979	ATXN7L3B	Q96GX2	97 aa		3.68	□□□□□ -1.82
ATM-223	ENST00000533979	SEC22A	Q96IW7	307 aa		3.68	□□□□□ -1.82
ATM-223	ENST00000533979	CPB2	Q96IY4	423 aa		3.68	□□□□□ -1.82
ATM-223	ENST00000533979	MS4A14	Q96JA4	679 aa		3.68	□□□□□ -1.82
ATM-223	ENST00000533979	MS4A4E	Q96PG1	132 aa		3.68	□□□□□ -1.82
ATM-223	ENST00000533979	OR8B4	Q96RC9	309 aa		3.68	□□□□□ -1.82
ATM-223	ENST00000533979	CIB1	Q99828	191 aa		3.68	□□□□□ -1.82
ATM-223	ENST00000533979	VGLL1	Q99990	258 aa		3.68	□□□□□ -1.82
ATM-223	ENST00000533979	DGCR6L	Q9BY27	220 aa		3.68	□□□□□ -1.82
ATM-223	ENST00000533979	ZYG11B	Q9C0D3	744 aa		3.68	□□□□□ -1.82
ATM-223	ENST00000533979	HDHD2	Q9H0R4	259 aa		3.68	□□□□□ -1.82
ATM-223	ENST00000533979	CAB39L	Q9H9S4	337 aa		3.68	□□□□□ -1.82
ATM-223	ENST00000533979	STMN3	Q9NZ72	180 aa		3.68	□□□□□ -1.82
ATM-223	ENST00000533979	KIF25	Q9UIL4	384 aa		3.68	□□□□□ -1.82
ATM-223	ENST00000533979	YARS2	Q9Y2Z4	477 aa	Known RBP	3.68	□□□□□ -1.82
ATM-223	ENST00000533979	ADGRA3	Q8IWK6	1321 aa		3.68	□□□□□ -1.82
ATM-223	ENST00000533979	FER1L5	A0AVI2	2057 aa		3.67	□□□□□ -1.82
ATM-223	ENST00000533979	LAMA3	Q16787	3333 aa		3.67	□□□□□ -1.82
ATM-223	ENST00000533979	DDX60	Q8IY21	1712 aa	Known RBP	3.67	□□□□□ -1.82
ATM-223	ENST00000533979	EYS	Q5T1H1	3165 aa		3.67	□□□□□ -1.82
ATM-223	ENST00000533979	IGLV7-46	A0A075B6I9	117 aa		3.67	□□□□□ -1.82
ATM-223	ENST00000533979		A0A1B0GTH9	108 aa		3.67	□□□□□ -1.82
ATM-223	ENST00000533979		A0A1B0GWB2	263 aa		3.67	□□□□□ -1.82
ATM-223	ENST00000533979	ZNF705E	A8MWA4	302 aa	Predicted RBP	3.67	□□□□□ -1.82
ATM-223	ENST00000533979	DCTN6	O00399	190 aa		3.67	□□□□□ -1.82
ATM-223	ENST00000533979	CCL21	O00585	134 aa		3.67	□□□□□ -1.82
ATM-223	ENST00000533979	SCAMP2	O15127	329 aa	Known RBP	3.67	□□□□□ -1.82
ATM-223	ENST00000533979	SLC19A2	O60779	497 aa		3.67	□□□□□ -1.82
ATM-223	ENST00000533979	ENTPD5	O75356	428 aa		3.67	□□□□□ -1.82
ATM-223	ENST00000533979	SCRG1	O75711	98 aa		3.67	□□□□□ -1.82
ATM-223	ENST00000533979	IFNA14	P01570	189 aa		3.67	□□□□□ -1.82
ATM-223	ENST00000533979	FGG	P02679	453 aa		3.67	□□□□□ -1.82
ATM-223	ENST00000533979	HMGN1	P05114	100 aa		3.67	□□□□□ -1.82
ATM-223	ENST00000533979	KLK1	P06870	262 aa		3.67	□□□□□ -1.82
ATM-223	ENST00000533979	HCK	P08631	526 aa		3.67	□□□□□ -1.82
ATM-223	ENST00000533979	KRT16	P08779	473 aa		3.67	□□□□□ -1.82
ATM-223	ENST00000533979	CALM1	P0DP23	149 aa		3.67	□□□□□ -1.82
ATM-223	ENST00000533979	CALM2	P0DP24	149 aa		3.67	□□□□□ -1.82
ATM-223	ENST00000533979	CALM3	P0DP25	149 aa		3.67	□□□□□ -1.82
ATM-223	ENST00000533979	SLC26A3	P40879	764 aa		3.67	□□□□□ -1.82
ATM-223	ENST00000533979	CSK	P41240	450 aa		3.67	□□□□□ -1.82
ATM-223	ENST00000533979	TFPI2	P48307	235 aa		3.67	□□□□□ -1.82
ATM-223	ENST00000533979	ALDH3B2	P48448	385 aa		3.67	□□□□□ -1.82
ATM-223	ENST00000533979	SKP1	P63208	163 aa		3.67	□□□□□ -1.82
ATM-223	ENST00000533979	CSNK1G2	P78368	415 aa		3.67	□□□□□ -1.82
ATM-223	ENST00000533979	MRPS11	P82912	194 aa	Known RBP	3.67	□□□□□ -1.82
ATM-223	ENST00000533979	STX3	Q13277	289 aa		3.67	□□□□□ -1.82
ATM-223	ENST00000533979	SF3A2	Q15428	464 aa	Known RBP	3.67	□□□□□ -1.82
ATM-223	ENST00000533979	ALX1	Q15699	326 aa		3.67	□□□□□ -1.82
ATM-223	ENST00000533979	PGGHG	Q32M88	737 aa		3.67	□□□□□ -1.82
ATM-223	ENST00000533979	MOGAT2	Q3SYC2	334 aa		3.67	□□□□□ -1.82

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