RNA–Protein interactions for RNA: ENST00000533667.5

CTNND1-236, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 4,990 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-236ENST00000533667 HSD17B8Q92506 261 aa6.4□□□□□ -1.38
CTNND1-236ENST00000533667 EMG1Q92979 244 aaKnown RBP6.4□□□□□ -1.38
CTNND1-236ENST00000533667 RNF170Q96K19 258 aa6.4□□□□□ -1.38
CTNND1-236ENST00000533667 ASB16Q96NS5 453 aa6.4□□□□□ -1.38
CTNND1-236ENST00000533667 RTL8AQ9BWD3 113 aa6.4□□□□□ -1.38
CTNND1-236ENST00000533667 OCEL1Q9H607 264 aa6.4□□□□□ -1.38
CTNND1-236ENST00000533667 PLEKHA2Q9HB19 425 aa6.4□□□□□ -1.38
CTNND1-236ENST00000533667 FGF22Q9HCT0 170 aa6.4□□□□□ -1.38
CTNND1-236ENST00000533667 TRAV1-2A0A0B4J238 106 aa6.4□□□□□ -1.39
CTNND1-236ENST00000533667 ZNF732B4DXR9 585 aa6.4□□□□□ -1.39
CTNND1-236ENST00000533667 M0R082 166 aa6.4□□□□□ -1.39
CTNND1-236ENST00000533667 M0R143 59 aa6.4□□□□□ -1.39
CTNND1-236ENST00000533667 CDK2AP1O14519 115 aa6.4□□□□□ -1.39
CTNND1-236ENST00000533667 BSGP35613 385 aa6.4□□□□□ -1.39
CTNND1-236ENST00000533667 POLR2GP62487 172 aaKnown RBP eCLIP6.4□□□□□ -1.39
CTNND1-236ENST00000533667 SNTB1Q13884 538 aaKnown RBP6.4□□□□□ -1.39
CTNND1-236ENST00000533667 CDK5R1Q15078 307 aa6.4□□□□□ -1.39
CTNND1-236ENST00000533667 SMAD2Q15796 467 aaKnown RBP6.4□□□□□ -1.39
CTNND1-236ENST00000533667 TMEM71Q6P5X7 295 aa6.4□□□□□ -1.39
CTNND1-236ENST00000533667 TMEM81Q6P7N7 255 aa6.4□□□□□ -1.39
CTNND1-236ENST00000533667 LHFPL2Q6ZUX7 228 aa6.4□□□□□ -1.39
CTNND1-236ENST00000533667 HSD17B11Q8NBQ5 300 aa6.4□□□□□ -1.39
CTNND1-236ENST00000533667 MITD1Q8WV92 249 aa6.4□□□□□ -1.39
CTNND1-236ENST00000533667 APH1AQ96BI3 265 aa6.4□□□□□ -1.39
CTNND1-236ENST00000533667 MRPL38Q96DV4 380 aaKnown RBP6.4□□□□□ -1.39
CTNND1-236ENST00000533667 IP6K3Q96PC2 410 aa6.4□□□□□ -1.39
CTNND1-236ENST00000533667 OPALINQ96PE5 141 aa6.4□□□□□ -1.39
CTNND1-236ENST00000533667 AKIP1Q9NQ31 210 aa6.4□□□□□ -1.39
CTNND1-236ENST00000533667 GAR1Q9NY12 217 aaKnown RBP6.4□□□□□ -1.39
CTNND1-236ENST00000533667 POLDIP2Q9Y2S7 368 aa6.4□□□□□ -1.39
CTNND1-236ENST00000533667 PCDHGA5Q9Y5G8 931 aa6.4□□□□□ -1.39
CTNND1-236ENST00000533667 LAMA4Q16363 1823 aa6.4□□□□□ -1.39
CTNND1-236ENST00000533667 COL16A1Q07092 1604 aaPredicted RBP6.4□□□□□ -1.39
CTNND1-236ENST00000533667 A0A1B0GUL6 1792 aa6.4□□□□□ -1.39
CTNND1-236ENST00000533667 TMEM202A6NGA9 273 aa6.4□□□□□ -1.39
CTNND1-236ENST00000533667 TMEM210A6NLX4 147 aa6.4□□□□□ -1.39
CTNND1-236ENST00000533667 LRRC30A6NM36 301 aa6.4□□□□□ -1.39
CTNND1-236ENST00000533667 FXYD1O00168 92 aa6.4□□□□□ -1.39
CTNND1-236ENST00000533667 TMPRSS11DO60235 418 aa6.4□□□□□ -1.39
CTNND1-236ENST00000533667 FZD6O60353 706 aa6.4□□□□□ -1.39
CTNND1-236ENST00000533667 CLN5O75503 358 aa6.4□□□□□ -1.39
CTNND1-236ENST00000533667 QDPRP09417 244 aa6.4□□□□□ -1.39
CTNND1-236ENST00000533667 CSF3P09919 207 aa6.4□□□□□ -1.39
CTNND1-236ENST00000533667 METTL15P1P0C7V9 234 aa6.4□□□□□ -1.39
CTNND1-236ENST00000533667 RPS23P62266 143 aaKnown RBP6.4□□□□□ -1.39
CTNND1-236ENST00000533667 ZNF85Q03923 595 aa6.4□□□□□ -1.39
CTNND1-236ENST00000533667 IL10RAQ13651 578 aa6.4□□□□□ -1.39
CTNND1-236ENST00000533667 CLINT1Q14677 625 aa6.4□□□□□ -1.39
CTNND1-236ENST00000533667 ZNF385BQ569K4 471 aa6.4□□□□□ -1.39
CTNND1-236ENST00000533667 FJX1Q86VR8 437 aa6.4□□□□□ -1.39
CTNND1-236ENST00000533667 SLC38A6Q8IZM9 456 aa6.4□□□□□ -1.39
CTNND1-236ENST00000533667 C1orf87Q8N0U7 546 aa6.4□□□□□ -1.39
CTNND1-236ENST00000533667 FAM71CQ8NEG0 241 aa6.4□□□□□ -1.39
CTNND1-236ENST00000533667 OR2AE1Q8NHA4 323 aa6.4□□□□□ -1.39
CTNND1-236ENST00000533667 OR10J5Q8NHC4 309 aa6.4□□□□□ -1.39
CTNND1-236ENST00000533667 HLA-CQ95604 372 aa6.4□□□□□ -1.39
CTNND1-236ENST00000533667 PIGTQ969N2 578 aa6.4□□□□□ -1.39
CTNND1-236ENST00000533667 SLAMF6Q96DU3 332 aa6.4□□□□□ -1.39
CTNND1-236ENST00000533667 DDOQ99489 341 aa6.4□□□□□ -1.39
CTNND1-236ENST00000533667 ELF4Q99607 663 aaPredicted RBP6.4□□□□□ -1.39
CTNND1-236ENST00000533667 TM7SF3Q9NS93 570 aa6.4□□□□□ -1.39
CTNND1-236ENST00000533667 TAS2R5Q9NYW4 299 aa6.4□□□□□ -1.39
CTNND1-236ENST00000533667 ZNF629Q9UEG4 869 aaPredicted RBP6.4□□□□□ -1.39
CTNND1-236ENST00000533667 EXO1Q9UQ84 846 aaKnown RBP6.4□□□□□ -1.39
CTNND1-236ENST00000533667 MRPS2Q9Y399 296 aaKnown RBP6.4□□□□□ -1.39
CTNND1-236ENST00000533667 TIMM10BQ9Y5J6 103 aa6.4□□□□□ -1.39
CTNND1-236ENST00000533667 LOXHD1Q8IVV2 1947 aa6.39□□□□□ -1.39
CTNND1-236ENST00000533667 LINC01553A4QN01 128 aa6.39□□□□□ -1.39
CTNND1-236ENST00000533667 IFITM5A6NNB3 132 aa6.39□□□□□ -1.39
CTNND1-236ENST00000533667 K7EQM0 130 aa6.39□□□□□ -1.39
CTNND1-236ENST00000533667 K7ERU9 68 aa6.39□□□□□ -1.39
CTNND1-236ENST00000533667 TERTO14746 1132 aaKnown RBP6.39□□□□□ -1.39
CTNND1-236ENST00000533667 DSCR3O14972 297 aa6.39□□□□□ -1.39
CTNND1-236ENST00000533667 HIST1H1CP16403 213 aaKnown RBP6.39□□□□□ -1.39
CTNND1-236ENST00000533667 GALP22466 123 aa6.39□□□□□ -1.39
CTNND1-236ENST00000533667 TAGLN2P37802 199 aaKnown RBP6.39□□□□□ -1.39
CTNND1-236ENST00000533667 SLC19A1P41440 591 aa6.39□□□□□ -1.39
CTNND1-236ENST00000533667 SUMO3P55854 103 aaPredicted RBP6.39□□□□□ -1.39
CTNND1-236ENST00000533667 PDZK1IP1Q13113 114 aa6.39□□□□□ -1.39
CTNND1-236ENST00000533667 AANATQ16613 207 aa6.39□□□□□ -1.39
CTNND1-236ENST00000533667 ANKRD33Q7Z3H0 272 aa6.39□□□□□ -1.39
CTNND1-236ENST00000533667 RPS19BP1Q86WX3 136 aaKnown RBP6.39□□□□□ -1.39
CTNND1-236ENST00000533667 KMT5CQ86Y97 462 aa6.39□□□□□ -1.39
CTNND1-236ENST00000533667 PTOV1Q86YD1 416 aa6.39□□□□□ -1.39
CTNND1-236ENST00000533667 KCNRGQ8N5I3 272 aa6.39□□□□□ -1.39
CTNND1-236ENST00000533667 SLC35G3Q8N808 338 aa6.39□□□□□ -1.39
CTNND1-236ENST00000533667 SLC38A9Q8NBW4 561 aa6.39□□□□□ -1.39
CTNND1-236ENST00000533667 NEURL2Q9BR09 285 aa6.39□□□□□ -1.39
CTNND1-236ENST00000533667 CALHM2Q9HA72 323 aa6.39□□□□□ -1.39
CTNND1-236ENST00000533667 MBNL1Q9NR56 388 aaKnown RBP6.39□□□□□ -1.39
CTNND1-236ENST00000533667 LYRM2Q9NU23 88 aaPredicted RBP6.39□□□□□ -1.39
CTNND1-236ENST00000533667 TAS2R4Q9NYW5 299 aa6.39□□□□□ -1.39
CTNND1-236ENST00000533667 MMP17Q9ULZ9 603 aa6.39□□□□□ -1.39
CTNND1-236ENST00000533667 GOLT1BQ9Y3E0 138 aa6.39□□□□□ -1.39
CTNND1-236ENST00000533667 ADAMTSL3P82987 1691 aa6.39□□□□□ -1.39
CTNND1-236ENST00000533667 CCDC163A0A0D9SF12 145 aa6.39□□□□□ -1.39
CTNND1-236ENST00000533667 LNP1A1A4G5 178 aa6.39□□□□□ -1.39
CTNND1-236ENST00000533667 DEGS1O15121 323 aa6.39□□□□□ -1.39
CTNND1-236ENST00000533667 OR8U8P0C7N1 319 aa6.39□□□□□ -1.39
CTNND1-236ENST00000533667 SRP9P49458 86 aaKnown RBP6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms