RNA–Protein interactions for RNA: ENST00000533482.5

RAD50-209, Transcript of RAD50 double strand break repair protein, humanhuman

TSL 1 (best)

Gene RAD50, Length 4,373 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAD50-209ENST00000533482 ANKRD9Q96BM1 317 aaPredicted RBP11.23□□□□□ -0.61
RAD50-209ENST00000533482 SHPKQ9UHJ6 478 aa11.23□□□□□ -0.61
RAD50-209ENST00000533482 CES1P1Q9UKY3 287 aa11.23□□□□□ -0.61
RAD50-209ENST00000533482 ARGFXA6NJG6 315 aa11.22□□□□□ -0.61
RAD50-209ENST00000533482 CXCL13O43927 109 aa11.22□□□□□ -0.61
RAD50-209ENST00000533482 FADS1O60427 444 aa11.22□□□□□ -0.61
RAD50-209ENST00000533482 OR8U9P0C7N5 309 aa11.22□□□□□ -0.61
RAD50-209ENST00000533482 CD46P15529 392 aa11.22□□□□□ -0.61
RAD50-209ENST00000533482 ZNF44P15621 663 aa11.22□□□□□ -0.61
RAD50-209ENST00000533482 EPHA1P21709 976 aa11.22□□□□□ -0.61
RAD50-209ENST00000533482 PNLIPRP2P54317 469 aa11.22□□□□□ -0.61
RAD50-209ENST00000533482 VHLLQ6RSH7 139 aa11.22□□□□□ -0.61
RAD50-209ENST00000533482 MAFIPQ8WZ33 124 aa11.22□□□□□ -0.61
RAD50-209ENST00000533482 NINJ1Q92982 152 aa11.22□□□□□ -0.61
RAD50-209ENST00000533482 UPRTQ96BW1 309 aa11.22□□□□□ -0.61
RAD50-209ENST00000533482 SLC19A3Q9BZV2 496 aa11.22□□□□□ -0.61
RAD50-209ENST00000533482 RNF32Q9H0A6 362 aa11.22□□□□□ -0.61
RAD50-209ENST00000533482 HRH4Q9H3N8 390 aa11.22□□□□□ -0.61
RAD50-209ENST00000533482 SHISA7A6NL88 538 aa11.22□□□□□ -0.61
RAD50-209ENST00000533482 PLPP2O43688 288 aa11.22□□□□□ -0.61
RAD50-209ENST00000533482 STK17BO94768 372 aa11.22□□□□□ -0.61
RAD50-209ENST00000533482 ENPP1P22413 925 aa11.22□□□□□ -0.61
RAD50-209ENST00000533482 CDAP32320 146 aa11.22□□□□□ -0.61
RAD50-209ENST00000533482 AKR1C2P52895 323 aa11.22□□□□□ -0.61
RAD50-209ENST00000533482 CYCSP99999 105 aaKnown RBP11.22□□□□□ -0.61
RAD50-209ENST00000533482 FNDC9Q8TBE3 224 aa11.22□□□□□ -0.61
RAD50-209ENST00000533482 TCEAL3Q969E4 200 aa11.22□□□□□ -0.61
RAD50-209ENST00000533482 WDFY2Q96P53 400 aa11.22□□□□□ -0.61
RAD50-209ENST00000533482 CHST11Q9NPF2 352 aa11.22□□□□□ -0.61
RAD50-209ENST00000533482 LRFN1Q9P244 771 aa11.22□□□□□ -0.61
RAD50-209ENST00000533482 V9GYH0 126 aa11.22□□□□□ -0.61
RAD50-209ENST00000533482 CYR61O00622 381 aa11.22□□□□□ -0.61
RAD50-209ENST00000533482 WNT1P04628 370 aa11.22□□□□□ -0.61
RAD50-209ENST00000533482 UBCP0CG48 685 aaKnown RBP11.22□□□□□ -0.61
RAD50-209ENST00000533482 CCL4P13236 92 aa11.22□□□□□ -0.61
RAD50-209ENST00000533482 APLNRP35414 380 aa11.22□□□□□ -0.61
RAD50-209ENST00000533482 EIF1P41567 113 aaKnown RBP11.22□□□□□ -0.61
RAD50-209ENST00000533482 MAP2K6P52564 334 aa11.22□□□□□ -0.61
RAD50-209ENST00000533482 FUT5Q11128 374 aa11.22□□□□□ -0.61
RAD50-209ENST00000533482 ZNF79Q15937 498 aa11.22□□□□□ -0.61
RAD50-209ENST00000533482 ETFDHQ16134 617 aa11.22□□□□□ -0.61
RAD50-209ENST00000533482 LINC00303Q3SY05 128 aa11.22□□□□□ -0.61
RAD50-209ENST00000533482 C6orf15Q6UXA7 325 aaPredicted RBP11.22□□□□□ -0.61
RAD50-209ENST00000533482 CMSS1Q9BQ75 279 aaKnown RBP11.22□□□□□ -0.61
RAD50-209ENST00000533482 PIGQQ9BRB3 760 aa11.22□□□□□ -0.61
RAD50-209ENST00000533482 DEFB127Q9H1M4 99 aa11.22□□□□□ -0.61
RAD50-209ENST00000533482 PPA2Q9H2U2 334 aa11.22□□□□□ -0.61
RAD50-209ENST00000533482 TXNIPQ9H3M7 391 aa11.22□□□□□ -0.61
RAD50-209ENST00000533482 POFUT1Q9H488 388 aa11.22□□□□□ -0.61
RAD50-209ENST00000533482 PRDM6Q9NQX0 595 aa11.22□□□□□ -0.61
RAD50-209ENST00000533482 FRG2CA6NGY1 282 aa11.21□□□□□ -0.61
RAD50-209ENST00000533482 CD53P19397 219 aa11.21□□□□□ -0.61
RAD50-209ENST00000533482 APOBEC1P41238 236 aaKnown RBP11.21□□□□□ -0.61
RAD50-209ENST00000533482 COL13A1Q5TAT6 717 aaPredicted RBP11.21□□□□□ -0.61
RAD50-209ENST00000533482 DGAT2L6Q6ZPD8 337 aa11.21□□□□□ -0.61
RAD50-209ENST00000533482 TSEN54Q7Z6J9 526 aaKnown RBP11.21□□□□□ -0.61
RAD50-209ENST00000533482 KCNG3Q8TAE7 436 aa11.21□□□□□ -0.61
RAD50-209ENST00000533482 CPT1CQ8TCG5 803 aa11.21□□□□□ -0.61
RAD50-209ENST00000533482 GLTPQ9NZD2 209 aa11.21□□□□□ -0.61
RAD50-209ENST00000533482 STMND1H3BQB6 276 aa11.21□□□□□ -0.61
RAD50-209ENST00000533482 SDCBPO00560 298 aaPredicted RBP11.21□□□□□ -0.61
RAD50-209ENST00000533482 SULT1B1O43704 296 aa11.21□□□□□ -0.61
RAD50-209ENST00000533482 S100A11P31949 105 aa11.21□□□□□ -0.61
RAD50-209ENST00000533482 C5orf46Q6UWT4 87 aa11.21□□□□□ -0.61
RAD50-209ENST00000533482 LIX1LQ8IVB5 337 aa11.21□□□□□ -0.61
RAD50-209ENST00000533482 SMIM4Q8WVI0 70 aa11.21□□□□□ -0.61
RAD50-209ENST00000533482 SYT3Q9BQG1 590 aa11.21□□□□□ -0.61
RAD50-209ENST00000533482 WIF1Q9Y5W5 379 aa11.21□□□□□ -0.61
RAD50-209ENST00000533482 SIRT4Q9Y6E7 314 aaPredicted RBP11.21□□□□□ -0.61
RAD50-209ENST00000533482 RGPD3A6NKT7 1758 aaPredicted RBP11.21□□□□□ -0.61
RAD50-209ENST00000533482 A0A096LPE4 126 aa11.21□□□□□ -0.62
RAD50-209ENST00000533482 A0A1W2PPZ6 126 aa11.21□□□□□ -0.62
RAD50-209ENST00000533482 IMPA2O14732 288 aa11.21□□□□□ -0.62
RAD50-209ENST00000533482 ZNF780AO75290 641 aaPredicted RBP11.21□□□□□ -0.62
RAD50-209ENST00000533482 MPZL1O95297 269 aa11.21□□□□□ -0.62
RAD50-209ENST00000533482 ABHD16AO95870 558 aa11.21□□□□□ -0.62
RAD50-209ENST00000533482 RAF1P04049 648 aa11.21□□□□□ -0.62
RAD50-209ENST00000533482 PDGFAP04085 211 aa11.21□□□□□ -0.62
RAD50-209ENST00000533482 GPR3P46089 330 aa11.21□□□□□ -0.62
RAD50-209ENST00000533482 ZNF136P52737 540 aa11.21□□□□□ -0.62
RAD50-209ENST00000533482 WDR88Q6ZMY6 472 aa11.21□□□□□ -0.62
RAD50-209ENST00000533482 ZSCAN1Q8NBB4 408 aa11.21□□□□□ -0.62
RAD50-209ENST00000533482 PSME4Q14997 1843 aa11.21□□□□□ -0.62
RAD50-209ENST00000533482 BHLHE40O14503 412 aa11.21□□□□□ -0.62
RAD50-209ENST00000533482 SNAPC5O75971 98 aa11.21□□□□□ -0.62
RAD50-209ENST00000533482 MSL3P1P0C860 447 aa11.21□□□□□ -0.62
RAD50-209ENST00000533482 LUMP51884 338 aaPredicted RBP11.21□□□□□ -0.62
RAD50-209ENST00000533482 ZNF85Q03923 595 aa11.21□□□□□ -0.62
RAD50-209ENST00000533482 FIP1L1Q6UN15 594 aaKnown RBP11.21□□□□□ -0.62
RAD50-209ENST00000533482 COMTD1Q86VU5 262 aa11.21□□□□□ -0.62
RAD50-209ENST00000533482 JAM3Q9BX67 310 aa11.21□□□□□ -0.62
RAD50-209ENST00000533482 SAV1Q9H4B6 383 aaPredicted RBP11.21□□□□□ -0.62
RAD50-209ENST00000533482 EXOGQ9Y2C4 368 aaKnown RBP11.21□□□□□ -0.62
RAD50-209ENST00000533482 FTCDNL1E5RQL4 147 aa11.2□□□□□ -0.62
RAD50-209ENST00000533482 BET1O15155 118 aa11.2□□□□□ -0.62
RAD50-209ENST00000533482 SEMG1P04279 462 aa11.2□□□□□ -0.62
RAD50-209ENST00000533482 POU2F2P09086 479 aa11.2□□□□□ -0.62
RAD50-209ENST00000533482 CAMLGP49069 296 aa11.2□□□□□ -0.62
RAD50-209ENST00000533482 ARL6IP1Q15041 203 aa11.2□□□□□ -0.62
RAD50-209ENST00000533482 EXT1Q16394 746 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms