RNA–Protein interactions for RNA: ENST00000533242.1

NEDD8-207, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 1 (best)

Gene NEDD8, Length 2,300 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-207ENST00000533242 ALG5Q9Y673 324 aa7.28□□□□□ -1.24
NEDD8-207ENST00000533242 IDH3BO43837 385 aa7.27□□□□□ -1.25
NEDD8-207ENST00000533242 PPM1BO75688 479 aa7.27□□□□□ -1.25
NEDD8-207ENST00000533242 CBR3O75828 277 aa7.27□□□□□ -1.25
NEDD8-207ENST00000533242 SERPINI2O75830 405 aa7.27□□□□□ -1.25
NEDD8-207ENST00000533242 CSTAP01040 98 aa7.27□□□□□ -1.25
NEDD8-207ENST00000533242 HK1P19367 917 aa7.27□□□□□ -1.25
NEDD8-207ENST00000533242 GALP22466 123 aa7.27□□□□□ -1.25
NEDD8-207ENST00000533242 PSMB10P40306 273 aa7.27□□□□□ -1.25
NEDD8-207ENST00000533242 SRP9P49458 86 aaKnown RBP7.27□□□□□ -1.25
NEDD8-207ENST00000533242 SRYQ05066 204 aa7.27□□□□□ -1.25
NEDD8-207ENST00000533242 SNTA1Q13424 505 aa7.27□□□□□ -1.25
NEDD8-207ENST00000533242 RIN1Q13671 783 aa7.27□□□□□ -1.25
NEDD8-207ENST00000533242 ZFP69Q49AA0 526 aa7.27□□□□□ -1.25
NEDD8-207ENST00000533242 ACSM3Q53FZ2 586 aa7.27□□□□□ -1.25
NEDD8-207ENST00000533242 RPL13AP3Q6NVV1 102 aa7.27□□□□□ -1.25
NEDD8-207ENST00000533242 PRR22Q8IZ63 422 aa7.27□□□□□ -1.25
NEDD8-207ENST00000533242 GCNT2Q8N0V5 402 aa7.27□□□□□ -1.25
NEDD8-207ENST00000533242 MEIOBQ8N635 442 aa7.27□□□□□ -1.25
NEDD8-207ENST00000533242 NPEPL1Q8NDH3 523 aa7.27□□□□□ -1.25
NEDD8-207ENST00000533242 OR7G1Q8NGA0 311 aa7.27□□□□□ -1.25
NEDD8-207ENST00000533242 OR14L1PQ8NHC6 308 aa7.27□□□□□ -1.25
NEDD8-207ENST00000533242 ENKURQ8TC29 256 aa7.27□□□□□ -1.25
NEDD8-207ENST00000533242 MOGAT1Q96PD6 335 aa7.27□□□□□ -1.25
NEDD8-207ENST00000533242 PDCD1LG2Q9BQ51 273 aa7.27□□□□□ -1.25
NEDD8-207ENST00000533242 OR10A5Q9H207 317 aa7.27□□□□□ -1.25
NEDD8-207ENST00000533242 CYSLTR2Q9NS75 346 aa7.27□□□□□ -1.25
NEDD8-207ENST00000533242 ACOXLQ9NUZ1 547 aa7.27□□□□□ -1.25
NEDD8-207ENST00000533242 ZNF701Q9NV72 531 aaPredicted RBP7.27□□□□□ -1.25
NEDD8-207ENST00000533242 HAO2Q9NYQ3 351 aa7.27□□□□□ -1.25
NEDD8-207ENST00000533242 A0A087WUJ7 227 aa7.27□□□□□ -1.25
NEDD8-207ENST00000533242 SERINC4A6NH21 518 aa7.27□□□□□ -1.25
NEDD8-207ENST00000533242 SMLR1H3BR10 107 aa7.27□□□□□ -1.25
NEDD8-207ENST00000533242 GMFGO60234 142 aa7.27□□□□□ -1.25
NEDD8-207ENST00000533242 SOX30O94993 753 aa7.27□□□□□ -1.25
NEDD8-207ENST00000533242 IFNA2P01563 188 aa7.27□□□□□ -1.25
NEDD8-207ENST00000533242 SNRPBP14678 240 aaKnown RBP7.27□□□□□ -1.25
NEDD8-207ENST00000533242 ATF1P18846 271 aa7.27□□□□□ -1.25
NEDD8-207ENST00000533242 ABCD3P28288 659 aa7.27□□□□□ -1.25
NEDD8-207ENST00000533242 SLC6A6P31641 620 aa7.27□□□□□ -1.25
NEDD8-207ENST00000533242 BTCP35070 178 aa7.27□□□□□ -1.25
NEDD8-207ENST00000533242 PTGDSP41222 190 aa7.27□□□□□ -1.25
NEDD8-207ENST00000533242 RBM34P42696 430 aaKnown RBP7.27□□□□□ -1.25
NEDD8-207ENST00000533242 LHX2P50458 406 aa7.27□□□□□ -1.25
NEDD8-207ENST00000533242 ATP12AP54707 1039 aa7.27□□□□□ -1.25
NEDD8-207ENST00000533242 GFRA1P56159 465 aa7.27□□□□□ -1.25
NEDD8-207ENST00000533242 ERVK-25P63136 954 aa7.27□□□□□ -1.25
NEDD8-207ENST00000533242 ZNHIT3Q15649 155 aaPredicted RBP7.27□□□□□ -1.25
NEDD8-207ENST00000533242 RNASE12Q5GAN4 147 aaKnown RBP7.27□□□□□ -1.25
NEDD8-207ENST00000533242 CEP78Q5JTW2 689 aa7.27□□□□□ -1.25
NEDD8-207ENST00000533242 OTPQ5XKR4 325 aa7.27□□□□□ -1.25
NEDD8-207ENST00000533242 OR2A2Q6IF42 318 aa7.27□□□□□ -1.25
NEDD8-207ENST00000533242 ULK3Q6PHR2 472 aa7.27□□□□□ -1.25
NEDD8-207ENST00000533242 P4HA3Q7Z4N8 544 aa7.27□□□□□ -1.25
NEDD8-207ENST00000533242 C19orf18Q8NEA5 215 aa7.27□□□□□ -1.25
NEDD8-207ENST00000533242 DUSP18Q8NEJ0 188 aa7.27□□□□□ -1.25
NEDD8-207ENST00000533242 TMEM171Q8WVE6 324 aa7.27□□□□□ -1.25
NEDD8-207ENST00000533242 STARD4Q96DR4 205 aa7.27□□□□□ -1.25
NEDD8-207ENST00000533242 HS3ST6Q96QI5 342 aa7.27□□□□□ -1.25
NEDD8-207ENST00000533242 OR14A2Q96R54 314 aa7.27□□□□□ -1.25
NEDD8-207ENST00000533242 TRIM2Q9C040 744 aa7.27□□□□□ -1.25
NEDD8-207ENST00000533242 KCNN2Q9H2S1 579 aa7.27□□□□□ -1.25
NEDD8-207ENST00000533242 PAQR5Q9NXK6 330 aaPredicted RBP7.27□□□□□ -1.25
NEDD8-207ENST00000533242 CR1P17927 2039 aa7.26□□□□□ -1.25
NEDD8-207ENST00000533242 DCTN6O00399 190 aa7.26□□□□□ -1.25
NEDD8-207ENST00000533242 RGS13O14921 159 aa7.26□□□□□ -1.25
NEDD8-207ENST00000533242 ICOSLGO75144 302 aa7.26□□□□□ -1.25
NEDD8-207ENST00000533242 NDUFB2O95178 105 aa7.26□□□□□ -1.25
NEDD8-207ENST00000533242 IFI6P09912 130 aa7.26□□□□□ -1.25
NEDD8-207ENST00000533242 ZNF708P17019 499 aa7.26□□□□□ -1.25
NEDD8-207ENST00000533242 SRD5A2P31213 254 aa7.26□□□□□ -1.25
NEDD8-207ENST00000533242 CLDN18P56856 261 aa7.26□□□□□ -1.25
NEDD8-207ENST00000533242 EGR4Q05215 589 aa7.26□□□□□ -1.25
NEDD8-207ENST00000533242 GPR176Q14439 515 aa7.26□□□□□ -1.25
NEDD8-207ENST00000533242 QPRTQ15274 297 aa7.26□□□□□ -1.25
NEDD8-207ENST00000533242 KLHL26Q53HC5 615 aa7.26□□□□□ -1.25
NEDD8-207ENST00000533242 ZNF474Q6S9Z5 364 aaPredicted RBP7.26□□□□□ -1.25
NEDD8-207ENST00000533242 METAP1DQ6UB28 335 aaPredicted RBP7.26□□□□□ -1.25
NEDD8-207ENST00000533242 PLET1Q6UQ28 207 aa7.26□□□□□ -1.25
NEDD8-207ENST00000533242 PLXDC2Q6UX71 529 aa7.26□□□□□ -1.25
NEDD8-207ENST00000533242 TRMT10AQ8TBZ6 339 aaKnown RBP7.26□□□□□ -1.25
NEDD8-207ENST00000533242 TMEM158Q8WZ71 300 aa7.26□□□□□ -1.25
NEDD8-207ENST00000533242 PMM1Q92871 262 aa7.26□□□□□ -1.25
NEDD8-207ENST00000533242 SGTBQ96EQ0 304 aa7.26□□□□□ -1.25
NEDD8-207ENST00000533242 ZC3HAV1LQ96H79 300 aaKnown RBP7.26□□□□□ -1.25
NEDD8-207ENST00000533242 Q96M85 177 aa7.26□□□□□ -1.25
NEDD8-207ENST00000533242 GFI1Q99684 422 aa7.26□□□□□ -1.25
NEDD8-207ENST00000533242 GALNT9Q9HCQ5 603 aa7.26□□□□□ -1.25
NEDD8-207ENST00000533242 Q9N2J8 555 aa7.26□□□□□ -1.25
NEDD8-207ENST00000533242 INPP5EQ9NRR6 644 aa7.26□□□□□ -1.25
NEDD8-207ENST00000533242 ST6GALNAC1Q9NSC7 600 aaPredicted RBP7.26□□□□□ -1.25
NEDD8-207ENST00000533242 MRPS18CQ9Y3D5 142 aaKnown RBP7.26□□□□□ -1.25
NEDD8-207ENST00000533242 OR10H1Q9Y4A9 318 aa7.26□□□□□ -1.25
NEDD8-207ENST00000533242 FAM240BA0A1B0GVZ2 78 aa7.26□□□□□ -1.25
NEDD8-207ENST00000533242 TTC36A6NLP5 189 aa7.26□□□□□ -1.25
NEDD8-207ENST00000533242 C16orf97H3BN30 126 aa7.26□□□□□ -1.25
NEDD8-207ENST00000533242 PIN1P1O15428 100 aa7.26□□□□□ -1.25
NEDD8-207ENST00000533242 TGM6O95932 706 aa7.26□□□□□ -1.25
NEDD8-207ENST00000533242 SPI1P17947 270 aa7.26□□□□□ -1.25
NEDD8-207ENST00000533242 CCKARP32238 428 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms