RNA–Protein interactions for RNA: ENST00000533196.1

SMPD1-209, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 3

Gene SMPD1, Length 425 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-209ENST00000533196 IL1RAPQ9NPH3 570 aa19.93■□□□□ 0.78
SMPD1-209ENST00000533196 IL20RAQ9UHF4 553 aa19.93■□□□□ 0.78
SMPD1-209ENST00000533196 V9GYQ6 96 aa19.93■□□□□ 0.78
SMPD1-209ENST00000533196 TRAV20A0A0B4J274 112 aa19.92■□□□□ 0.78
SMPD1-209ENST00000533196 ZSCAN5BA6NJL1 495 aa19.92■□□□□ 0.78
SMPD1-209ENST00000533196 WNT9BO14905 357 aa19.92■□□□□ 0.78
SMPD1-209ENST00000533196 PSG7Q13046 419 aa19.92■□□□□ 0.78
SMPD1-209ENST00000533196 LIPNQ5VXI9 398 aa19.92■□□□□ 0.78
SMPD1-209ENST00000533196 PTCHD4Q6ZW05 846 aa19.92■□□□□ 0.78
SMPD1-209ENST00000533196 FANK1Q8TC84 345 aa19.92■□□□□ 0.78
SMPD1-209ENST00000533196 GPA33Q99795 319 aa19.92■□□□□ 0.78
SMPD1-209ENST00000533196 RERGLQ9H628 205 aa19.92■□□□□ 0.78
SMPD1-209ENST00000533196 ZNF665Q9H7R5 613 aa19.92■□□□□ 0.78
SMPD1-209ENST00000533196 ARL8BQ9NVJ2 186 aa19.92■□□□□ 0.78
SMPD1-209ENST00000533196 HIF1ANQ9NWT6 349 aa19.92■□□□□ 0.78
SMPD1-209ENST00000533196 ASH2LQ9UBL3 628 aa19.92■□□□□ 0.78
SMPD1-209ENST00000533196 TMCC3Q9ULS5 477 aa19.92■□□□□ 0.78
SMPD1-209ENST00000533196 WIPI2Q9Y4P8 454 aa19.92■□□□□ 0.78
SMPD1-209ENST00000533196 OR6C6A6NF89 314 aa19.91■□□□□ 0.78
SMPD1-209ENST00000533196 TIMM8AO60220 97 aaPredicted RBP19.91■□□□□ 0.78
SMPD1-209ENST00000533196 OR10H3O60404 316 aa19.91■□□□□ 0.78
SMPD1-209ENST00000533196 KITLGP21583 273 aa19.91■□□□□ 0.78
SMPD1-209ENST00000533196 CDKN2AP42771 156 aaKnown RBP19.91■□□□□ 0.78
SMPD1-209ENST00000533196 RGS6P49758 472 aa19.91■□□□□ 0.78
SMPD1-209ENST00000533196 MVKQ03426 396 aa19.91■□□□□ 0.78
SMPD1-209ENST00000533196 ACSM5Q6NUN0 579 aa19.91■□□□□ 0.78
SMPD1-209ENST00000533196 TEX29Q8N6K0 151 aa19.91■□□□□ 0.78
SMPD1-209ENST00000533196 OR1F12Q8NHA8 337 aa19.91■□□□□ 0.78
SMPD1-209ENST00000533196 ERMAPQ96PL5 475 aaPredicted RBP19.91■□□□□ 0.78
SMPD1-209ENST00000533196 OR52D1Q9H346 318 aa19.91■□□□□ 0.78
SMPD1-209ENST00000533196 IDH3BO43837 385 aa19.9■□□□□ 0.78
SMPD1-209ENST00000533196 KRT36O76013 467 aa19.9■□□□□ 0.78
SMPD1-209ENST00000533196 UBOX5O94941 541 aa19.9■□□□□ 0.78
SMPD1-209ENST00000533196 CDK5R2Q13319 367 aa19.9■□□□□ 0.78
SMPD1-209ENST00000533196 AVPI1Q5T686 147 aa19.9■□□□□ 0.78
SMPD1-209ENST00000533196 C1orf94Q6P1W5 598 aa19.9■□□□□ 0.78
SMPD1-209ENST00000533196 JAZF1Q86VZ6 243 aa19.9■□□□□ 0.78
SMPD1-209ENST00000533196 DEFB107AQ8IZN7 70 aa19.9■□□□□ 0.78
SMPD1-209ENST00000533196 GJC3Q8NFK1 279 aa19.9■□□□□ 0.78
SMPD1-209ENST00000533196 PTP4A1Q93096 173 aa19.9■□□□□ 0.78
SMPD1-209ENST00000533196 PURGQ9UJV8 347 aaKnown RBP19.9■□□□□ 0.78
SMPD1-209ENST00000533196 DYSFO75923 2080 aa19.89■□□□□ 0.77
SMPD1-209ENST00000533196 MPZL1O95297 269 aa19.89■□□□□ 0.77
SMPD1-209ENST00000533196 PPP1R3DO95685 299 aa19.89■□□□□ 0.77
SMPD1-209ENST00000533196 RENP00797 406 aa19.89■□□□□ 0.77
SMPD1-209ENST00000533196 RRM2P31350 389 aa19.89■□□□□ 0.77
SMPD1-209ENST00000533196 MSX2P35548 267 aaPredicted RBP19.89■□□□□ 0.77
SMPD1-209ENST00000533196 GSSP48637 474 aa19.89■□□□□ 0.77
SMPD1-209ENST00000533196 HIST1H3AP68431 136 aa19.89■□□□□ 0.77
SMPD1-209ENST00000533196 MXRA7P84157 204 aa19.89■□□□□ 0.77
SMPD1-209ENST00000533196 SCGB2A2Q13296 93 aa19.89■□□□□ 0.77
SMPD1-209ENST00000533196 KRTAP24-1Q3LI83 254 aa19.89■□□□□ 0.77
SMPD1-209ENST00000533196 CCDC92Q53HC0 331 aaPredicted RBP19.89■□□□□ 0.77
SMPD1-209ENST00000533196 HIST2H3PS2Q5TEC6 136 aa19.89■□□□□ 0.77
SMPD1-209ENST00000533196 RINLQ6ZS11 566 aa19.89■□□□□ 0.77
SMPD1-209ENST00000533196 HIST2H3AQ71DI3 136 aa19.89■□□□□ 0.77
SMPD1-209ENST00000533196 PEG10Q86TG7 708 aaKnown RBP19.89■□□□□ 0.77
SMPD1-209ENST00000533196 LINC00471Q8N535 108 aa19.89■□□□□ 0.77
SMPD1-209ENST00000533196 GNPDA2Q8TDQ7 276 aa19.89■□□□□ 0.77
SMPD1-209ENST00000533196 CCL17Q92583 94 aa19.89■□□□□ 0.77
SMPD1-209ENST00000533196 HAVCR1Q96D42 359 aa19.89■□□□□ 0.77
SMPD1-209ENST00000533196 B9D1Q9UPM9 204 aa19.89■□□□□ 0.77
SMPD1-209ENST00000533196 POLR1DQ9Y2S0 133 aa19.89■□□□□ 0.77
SMPD1-209ENST00000533196 IGLV1-36A0A0B4J1U3 117 aa19.88■□□□□ 0.77
SMPD1-209ENST00000533196 DEAF1O75398 565 aaPredicted RBP19.88■□□□□ 0.77
SMPD1-209ENST00000533196 TNFRSF1AP19438 455 aa19.88■□□□□ 0.77
SMPD1-209ENST00000533196 TNFSF4P23510 183 aa19.88■□□□□ 0.77
SMPD1-209ENST00000533196 HMGA2P52926 109 aa19.88■□□□□ 0.77
SMPD1-209ENST00000533196 GYS2P54840 703 aa19.88■□□□□ 0.77
SMPD1-209ENST00000533196 TSPAN31Q12999 210 aa19.88■□□□□ 0.77
SMPD1-209ENST00000533196 LEG1Q6P5S2 330 aa19.88■□□□□ 0.77
SMPD1-209ENST00000533196 ZDHHC21Q8IVQ6 265 aa19.88■□□□□ 0.77
SMPD1-209ENST00000533196 ARHGAP24Q8N264 748 aa19.88■□□□□ 0.77
SMPD1-209ENST00000533196 OR5L1Q8NGL2 311 aa19.88■□□□□ 0.77
SMPD1-209ENST00000533196 CMBLQ96DG6 245 aa19.88■□□□□ 0.77
SMPD1-209ENST00000533196 COQ7Q99807 217 aa19.88■□□□□ 0.77
SMPD1-209ENST00000533196 IFT27Q9BW83 186 aa19.88■□□□□ 0.77
SMPD1-209ENST00000533196 HDHD2Q9H0R4 259 aa19.88■□□□□ 0.77
SMPD1-209ENST00000533196 MSL2Q9HCI7 577 aa19.88■□□□□ 0.77
SMPD1-209ENST00000533196 METRNQ9UJH8 293 aa19.88■□□□□ 0.77
SMPD1-209ENST00000533196 STARD10Q9Y365 291 aa19.88■□□□□ 0.77
SMPD1-209ENST00000533196 CACNG2Q9Y698 323 aa19.88■□□□□ 0.77
SMPD1-209ENST00000533196 RER1O15258 196 aa19.87■□□□□ 0.77
SMPD1-209ENST00000533196 TCF21O43680 179 aa19.87■□□□□ 0.77
SMPD1-209ENST00000533196 IGHV2-5P01817 119 aa19.87■□□□□ 0.77
SMPD1-209ENST00000533196 RAC2P15153 192 aa19.87■□□□□ 0.77
SMPD1-209ENST00000533196 TNFAIP6P98066 277 aaPredicted RBP19.87■□□□□ 0.77
SMPD1-209ENST00000533196 COX10Q12887 443 aa19.87■□□□□ 0.77
SMPD1-209ENST00000533196 SLC36A3Q495N2 470 aa19.87■□□□□ 0.77
SMPD1-209ENST00000533196 RPL13AP3Q6NVV1 102 aa19.87■□□□□ 0.77
SMPD1-209ENST00000533196 ZBTB46Q86UZ6 589 aa19.87■□□□□ 0.77
SMPD1-209ENST00000533196 SAMD8Q96LT4 415 aa19.87■□□□□ 0.77
SMPD1-209ENST00000533196 REPIN1Q9BWE0 567 aaKnown RBP19.87■□□□□ 0.77
SMPD1-209ENST00000533196 LPAR2Q9HBW0 351 aa19.87■□□□□ 0.77
SMPD1-209ENST00000533196 ACTR3BQ9P1U1 418 aa19.87■□□□□ 0.77
SMPD1-209ENST00000533196 DCTN6O00399 190 aa19.86■□□□□ 0.77
SMPD1-209ENST00000533196 SURF4O15260 269 aa19.86■□□□□ 0.77
SMPD1-209ENST00000533196 PNPP00491 289 aa19.86■□□□□ 0.77
SMPD1-209ENST00000533196 NOS3P29474 1203 aa19.86■□□□□ 0.77
SMPD1-209ENST00000533196 CENPAP49450 140 aa19.86■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms